Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm26446-201ENSMUST00000082455 103 ntBASIC4.75□□□□□ -1.65
Col6a1Q04857 Gm22155-201ENSMUST00000083836 162 ntBASIC4.75□□□□□ -1.65
Col6a1Q04857 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Col6a1Q04857 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Col6a1Q04857 Gm37983-201ENSMUST00000193207 2006 ntBASIC4.75□□□□□ -1.65
Col6a1Q04857 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
Col6a1Q04857 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a1Q04857 AC154462.1-201ENSMUST00000228897 2260 ntBASIC4.75□□□□□ -1.65
Col6a1Q04857 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a1Q04857 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Col6a1Q04857 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a1Q04857 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a1Q04857 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a1Q04857 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.74□□□□□ -1.65
Col6a1Q04857 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a1Q04857 Gm12010-201ENSMUST00000122400 2017 ntBASIC4.74□□□□□ -1.65
Col6a1Q04857 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
Col6a1Q04857 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a1Q04857 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC4.74□□□□□ -1.65
Col6a1Q04857 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC4.74□□□□□ -1.65
Col6a1Q04857 Mir592-201ENSMUST00000102113 96 ntBASIC4.74□□□□□ -1.65
Col6a1Q04857 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Col6a1Q04857 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC4.74□□□□□ -1.65
Col6a1Q04857 Gm25879-201ENSMUST00000104330 107 ntBASIC4.74□□□□□ -1.65
Col6a1Q04857 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a1Q04857 Gm12647-201ENSMUST00000118977 265 ntBASIC4.74□□□□□ -1.65
Col6a1Q04857 Gm12335-201ENSMUST00000119738 327 ntBASIC4.74□□□□□ -1.65
Col6a1Q04857 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC4.74□□□□□ -1.65
Col6a1Q04857 Gm13396-201ENSMUST00000120617 271 ntBASIC4.74□□□□□ -1.65
Col6a1Q04857 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC4.74□□□□□ -1.65
Col6a1Q04857 Gm26149-201ENSMUST00000157432 108 ntBASIC4.74□□□□□ -1.65
Col6a1Q04857 Gm26373-201ENSMUST00000157833 103 ntBASIC4.74□□□□□ -1.65
Col6a1Q04857 Gm17065-201ENSMUST00000165245 239 ntBASIC4.74□□□□□ -1.65
Col6a1Q04857 Gm22114-201ENSMUST00000177756 107 ntBASIC4.74□□□□□ -1.65
Col6a1Q04857 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC4.74□□□□□ -1.65
Col6a1Q04857 Gm28552-201ENSMUST00000190725 388 ntBASIC4.74□□□□□ -1.65
Col6a1Q04857 Gm36934-201ENSMUST00000192007 306 ntBASIC4.74□□□□□ -1.65
Col6a1Q04857 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC4.74□□□□□ -1.65
Col6a1Q04857 Gm7468-201ENSMUST00000203900 652 ntBASIC4.74□□□□□ -1.65
Col6a1Q04857 Gm45796-201ENSMUST00000212483 114 ntBASIC4.74□□□□□ -1.65
Col6a1Q04857 Gm3086-202ENSMUST00000221248 310 ntBASIC4.74□□□□□ -1.65
Col6a1Q04857 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC4.74□□□□□ -1.65
Col6a1Q04857 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC4.74□□□□□ -1.65
Col6a1Q04857 Gm22974-201ENSMUST00000083301 103 ntBASIC4.74□□□□□ -1.65
Col6a1Q04857 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a1Q04857 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
Col6a1Q04857 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a1Q04857 Gm37387-201ENSMUST00000192201 1806 ntBASIC4.74□□□□□ -1.65
Col6a1Q04857 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Col6a1Q04857 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
Col6a1Q04857 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a1Q04857 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Col6a1Q04857 Gm23142-201ENSMUST00000101848 105 ntBASIC4.73□□□□□ -1.65
Col6a1Q04857 Gm26240-201ENSMUST00000101893 105 ntBASIC4.73□□□□□ -1.65
Col6a1Q04857 Gm14296-202ENSMUST00000108931 750 ntBASIC4.73□□□□□ -1.65
Col6a1Q04857 Gm13355-201ENSMUST00000117996 317 ntBASIC4.73□□□□□ -1.65
Col6a1Q04857 Gm12779-201ENSMUST00000121496 143 ntBASIC4.73□□□□□ -1.65
Col6a1Q04857 Gm25333-201ENSMUST00000158035 246 ntBASIC4.73□□□□□ -1.65
Col6a1Q04857 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC4.73□□□□□ -1.65
Col6a1Q04857 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a1Q04857 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a1Q04857 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC4.73□□□□□ -1.65
Col6a1Q04857 Gm26701-201ENSMUST00000181571 234 ntBASIC4.73□□□□□ -1.65
Col6a1Q04857 Gm7656-201ENSMUST00000182468 1004 ntBASIC4.73□□□□□ -1.65
Col6a1Q04857 Gm27624-201ENSMUST00000185047 177 ntBASIC4.73□□□□□ -1.65
Col6a1Q04857 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC4.73□□□□□ -1.65
Col6a1Q04857 Gm44977-201ENSMUST00000205283 420 ntBASIC4.73□□□□□ -1.65
Col6a1Q04857 AC125374.2-201ENSMUST00000214278 162 ntBASIC4.73□□□□□ -1.65
Col6a1Q04857 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC4.73□□□□□ -1.65
Col6a1Q04857 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a1Q04857 Gm43260-201ENSMUST00000197378 2430 ntBASIC4.73□□□□□ -1.65
Col6a1Q04857 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
Col6a1Q04857 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Col6a1Q04857 Gm43508-201ENSMUST00000197251 3783 ntBASIC4.72□□□□□ -1.65
Col6a1Q04857 Gm24987-201ENSMUST00000104453 134 ntBASIC4.72□□□□□ -1.65
Col6a1Q04857 Gm11935-201ENSMUST00000118608 399 ntBASIC4.72□□□□□ -1.65
Col6a1Q04857 Gm13692-201ENSMUST00000120774 371 ntBASIC4.72□□□□□ -1.65
Col6a1Q04857 Gm12956-201ENSMUST00000122184 414 ntBASIC4.72□□□□□ -1.65
Col6a1Q04857 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a1Q04857 Gm25447-201ENSMUST00000158997 128 ntBASIC4.72□□□□□ -1.65
Col6a1Q04857 Mir5098-201ENSMUST00000175320 82 ntBASIC4.72□□□□□ -1.65
Col6a1Q04857 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC4.72□□□□□ -1.65
Col6a1Q04857 Gm44349-201ENSMUST00000197048 123 ntBASIC4.72□□□□□ -1.65
Col6a1Q04857 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC4.72□□□□□ -1.65
Col6a1Q04857 AC144819.1-201ENSMUST00000227015 620 ntBASIC4.72□□□□□ -1.65
Col6a1Q04857 AC157772.2-201ENSMUST00000228202 259 ntBASIC4.72□□□□□ -1.65
Col6a1Q04857 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC4.72□□□□□ -1.65
Col6a1Q04857 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Col6a1Q04857 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a1Q04857 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.72□□□□□ -1.65
Col6a1Q04857 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
Col6a1Q04857 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.71□□□□□ -1.65
Col6a1Q04857 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
Col6a1Q04857 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
Col6a1Q04857 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Col6a1Q04857 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a1Q04857 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.71□□□□□ -1.66
Col6a1Q04857 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a1Q04857 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC4.71□□□□□ -1.66
Col6a1Q04857 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 92.7 ms