Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 AC134254.5-201ENSMUST00000223436 400 ntBASIC1.95□□□□□ -2.1
Nkx3-1P97436 AC163664.1-201ENSMUST00000226251 1248 ntBASIC1.95□□□□□ -2.1
Nkx3-1P97436 AC150560.3-201ENSMUST00000227442 455 ntBASIC1.95□□□□□ -2.1
Nkx3-1P97436 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm22806-201ENSMUST00000082738 136 ntBASIC1.95□□□□□ -2.1
Nkx3-1P97436 n-R5s197-201ENSMUST00000083302 119 ntBASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm45263-201ENSMUST00000210377 1375 ntBASIC1.95□□□□□ -2.1
Nkx3-1P97436 AC152979.2-201ENSMUST00000219702 3814 ntBASIC1.95□□□□□ -2.1
Nkx3-1P97436 AC121598.3-201ENSMUST00000227179 1643 ntBASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm18751-201ENSMUST00000185777 2013 ntBASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm43540-201ENSMUST00000196320 3848 ntBASIC1.94□□□□□ -2.1
Nkx3-1P97436 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC1.94□□□□□ -2.1
Nkx3-1P97436 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Nkx3-1P97436 Gm27013-202ENSMUST00000205067 1436 ntBASIC1.94□□□□□ -2.1
Nkx3-1P97436 Gm26154-201ENSMUST00000102339 96 ntBASIC1.94□□□□□ -2.1
Nkx3-1P97436 Gm23011-201ENSMUST00000104148 132 ntBASIC1.94□□□□□ -2.1
Nkx3-1P97436 Gm15159-201ENSMUST00000117062 764 ntBASIC1.94□□□□□ -2.1
Nkx3-1P97436 Gm13588-201ENSMUST00000120026 135 ntBASIC1.94□□□□□ -2.1
Nkx3-1P97436 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC1.94□□□□□ -2.1
Nkx3-1P97436 Gm14979-201ENSMUST00000121561 1035 ntBASIC1.94□□□□□ -2.1
Nkx3-1P97436 n-R5s191-201ENSMUST00000122724 116 ntBASIC1.94□□□□□ -2.1
Nkx3-1P97436 Gm22159-201ENSMUST00000158412 130 ntBASIC1.94□□□□□ -2.1
Nkx3-1P97436 Gm23312-201ENSMUST00000158774 102 ntBASIC1.94□□□□□ -2.1
Nkx3-1P97436 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Nkx3-1P97436 Gm16561-201ENSMUST00000163001 192 ntBASIC1.94□□□□□ -2.1
Nkx3-1P97436 Gm24080-201ENSMUST00000175178 232 ntBASIC1.94□□□□□ -2.1
Nkx3-1P97436 Gm26365-201ENSMUST00000179177 94 ntBASIC1.94□□□□□ -2.1
Nkx3-1P97436 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC1.94□□□□□ -2.1
Nkx3-1P97436 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC1.94□□□□□ -2.1
Nkx3-1P97436 Gm20776-201ENSMUST00000189940 700 ntBASIC1.94□□□□□ -2.1
Nkx3-1P97436 Gm28169-201ENSMUST00000190342 345 ntBASIC1.94□□□□□ -2.1
Nkx3-1P97436 Gm37946-201ENSMUST00000192064 347 ntBASIC1.94□□□□□ -2.1
Nkx3-1P97436 Gm37708-201ENSMUST00000192337 895 ntBASIC1.94□□□□□ -2.1
Nkx3-1P97436 Gm37002-201ENSMUST00000194560 373 ntBASIC1.94□□□□□ -2.1
Nkx3-1P97436 Gm38268-201ENSMUST00000195813 193 ntBASIC1.94□□□□□ -2.1
Nkx3-1P97436 Gm44476-201ENSMUST00000196225 91 ntBASIC1.94□□□□□ -2.1
Nkx3-1P97436 Gm43659-201ENSMUST00000200894 628 ntBASIC1.94□□□□□ -2.1
Nkx3-1P97436 Gm44520-201ENSMUST00000205447 802 ntBASIC1.94□□□□□ -2.1
Nkx3-1P97436 Gm18453-201ENSMUST00000208000 626 ntBASIC1.94□□□□□ -2.1
Nkx3-1P97436 AC155715.1-201ENSMUST00000213575 463 ntBASIC1.94□□□□□ -2.1
Nkx3-1P97436 Gm35262-201ENSMUST00000215133 267 ntBASIC1.94□□□□□ -2.1
Nkx3-1P97436 Gm17890-201ENSMUST00000221419 757 ntBASIC1.94□□□□□ -2.1
Nkx3-1P97436 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Nkx3-1P97436 AC154426.1-201ENSMUST00000225614 1132 ntBASIC1.94□□□□□ -2.1
Nkx3-1P97436 AC107663.3-201ENSMUST00000225873 601 ntBASIC1.94□□□□□ -2.1
Nkx3-1P97436 CT025157.1-201ENSMUST00000226241 292 ntBASIC1.94□□□□□ -2.1
Nkx3-1P97436 AC124104.1-201ENSMUST00000226279 417 ntBASIC1.94□□□□□ -2.1
Nkx3-1P97436 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Nkx3-1P97436 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.94□□□□□ -2.1
Nkx3-1P97436 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Nkx3-1P97436 Gm22507-201ENSMUST00000082773 160 ntBASIC1.94□□□□□ -2.1
Nkx3-1P97436 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Nkx3-1P97436 AC153967.1-201ENSMUST00000219333 3190 ntBASIC1.94□□□□□ -2.1
Nkx3-1P97436 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Nkx3-1P97436 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC1.93□□□□□ -2.1
Nkx3-1P97436 Gm42482-201ENSMUST00000198904 1947 ntBASIC1.93□□□□□ -2.1
Nkx3-1P97436 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Nkx3-1P97436 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC1.93□□□□□ -2.1
Nkx3-1P97436 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC1.93□□□□□ -2.1
Nkx3-1P97436 Gm14794-201ENSMUST00000118181 192 ntBASIC1.93□□□□□ -2.1
Nkx3-1P97436 Gm14602-201ENSMUST00000118625 340 ntBASIC1.93□□□□□ -2.1
Nkx3-1P97436 Gm22947-201ENSMUST00000158559 91 ntBASIC1.93□□□□□ -2.1
Nkx3-1P97436 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC1.93□□□□□ -2.1
Nkx3-1P97436 Gm23190-201ENSMUST00000180307 64 ntBASIC1.93□□□□□ -2.1
Nkx3-1P97436 Gm27522-201ENSMUST00000183949 230 ntBASIC1.93□□□□□ -2.1
Nkx3-1P97436 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Nkx3-1P97436 Gm43550-201ENSMUST00000200597 303 ntBASIC1.93□□□□□ -2.1
Nkx3-1P97436 CT573422.1-201ENSMUST00000216655 405 ntBASIC1.93□□□□□ -2.1
Nkx3-1P97436 Gm46389-201ENSMUST00000223199 392 ntBASIC1.93□□□□□ -2.1
Nkx3-1P97436 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
Nkx3-1P97436 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
Nkx3-1P97436 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
Nkx3-1P97436 Gm23939-201ENSMUST00000082880 133 ntBASIC1.93□□□□□ -2.1
Nkx3-1P97436 Gm22293-201ENSMUST00000083314 109 ntBASIC1.93□□□□□ -2.1
Nkx3-1P97436 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
Nkx3-1P97436 Gm44562-201ENSMUST00000207194 1347 ntBASIC1.92□□□□□ -2.1
Nkx3-1P97436 Gm45178-201ENSMUST00000207744 4110 ntBASIC1.92□□□□□ -2.1
Nkx3-1P97436 Gm6185-201ENSMUST00000193379 3553 ntBASIC1.92□□□□□ -2.1
Nkx3-1P97436 Gm23950-201ENSMUST00000104026 129 ntBASIC1.92□□□□□ -2.1
Nkx3-1P97436 Gm16431-201ENSMUST00000117454 431 ntBASIC1.92□□□□□ -2.1
Nkx3-1P97436 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC1.92□□□□□ -2.1
Nkx3-1P97436 Defa-ps1-201ENSMUST00000119062 282 ntBASIC1.92□□□□□ -2.1
Nkx3-1P97436 Gm5937-201ENSMUST00000119715 643 ntBASIC1.92□□□□□ -2.1
Nkx3-1P97436 Cox20-ps-201ENSMUST00000119872 353 ntBASIC1.92□□□□□ -2.1
Nkx3-1P97436 Gm12607-201ENSMUST00000120724 493 ntBASIC1.92□□□□□ -2.1
Nkx3-1P97436 Defa-ps6-201ENSMUST00000122172 282 ntBASIC1.92□□□□□ -2.1
Nkx3-1P97436 Gm22960-201ENSMUST00000122517 104 ntBASIC1.92□□□□□ -2.1
Nkx3-1P97436 Gm22478-201ENSMUST00000122570 154 ntBASIC1.92□□□□□ -2.1
Nkx3-1P97436 Gm22073-201ENSMUST00000122668 189 ntBASIC1.92□□□□□ -2.1
Nkx3-1P97436 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC1.92□□□□□ -2.1
Nkx3-1P97436 Gm23642-201ENSMUST00000157858 258 ntBASIC1.92□□□□□ -2.1
Nkx3-1P97436 Gm22803-201ENSMUST00000158049 283 ntBASIC1.92□□□□□ -2.1
Nkx3-1P97436 Hmga1b-202ENSMUST00000178955 120 ntBASIC1.92□□□□□ -2.1
Nkx3-1P97436 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC1.92□□□□□ -2.1
Nkx3-1P97436 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC1.92□□□□□ -2.1
Nkx3-1P97436 Gm43722-201ENSMUST00000196054 124 ntBASIC1.92□□□□□ -2.1
Nkx3-1P97436 Gm43493-201ENSMUST00000199837 202 ntBASIC1.92□□□□□ -2.1
Nkx3-1P97436 Gm44274-201ENSMUST00000203417 256 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms