Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm24836-201ENSMUST00000122609 108 ntBASIC3.26□□□□□ -1.89
NcanP55066 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.26□□□□□ -1.89
NcanP55066 Gm2020-201ENSMUST00000145242 579 ntBASIC3.26□□□□□ -1.89
NcanP55066 Gm25863-201ENSMUST00000158249 329 ntBASIC3.26□□□□□ -1.89
NcanP55066 Gm22765-201ENSMUST00000158371 128 ntBASIC3.26□□□□□ -1.89
NcanP55066 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.26□□□□□ -1.89
NcanP55066 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.26□□□□□ -1.89
NcanP55066 Gm3111-201ENSMUST00000167426 490 ntBASIC3.26□□□□□ -1.89
NcanP55066 Gm22264-201ENSMUST00000178200 107 ntBASIC3.26□□□□□ -1.89
NcanP55066 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NcanP55066 Mir7017-201ENSMUST00000184894 62 ntBASIC3.26□□□□□ -1.89
NcanP55066 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC3.26□□□□□ -1.89
NcanP55066 Gm43489-201ENSMUST00000196810 993 ntBASIC3.26□□□□□ -1.89
NcanP55066 Gm44125-201ENSMUST00000203068 448 ntBASIC3.26□□□□□ -1.89
NcanP55066 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NcanP55066 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC3.26□□□□□ -1.89
NcanP55066 Gm18488-201ENSMUST00000215082 364 ntBASIC3.26□□□□□ -1.89
NcanP55066 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.26□□□□□ -1.89
NcanP55066 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.26□□□□□ -1.89
NcanP55066 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC3.26□□□□□ -1.89
NcanP55066 Gm7753-201ENSMUST00000221007 867 ntBASIC3.26□□□□□ -1.89
NcanP55066 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
NcanP55066 Gm10212-201ENSMUST00000087884 324 ntBASIC3.26□□□□□ -1.89
NcanP55066 Mir127-201ENSMUST00000093568 70 ntBASIC3.26□□□□□ -1.89
NcanP55066 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
NcanP55066 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
NcanP55066 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
NcanP55066 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
NcanP55066 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.25□□□□□ -1.89
NcanP55066 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
NcanP55066 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NcanP55066 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
NcanP55066 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
NcanP55066 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
NcanP55066 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NcanP55066 Gm12787-201ENSMUST00000119234 396 ntBASIC3.25□□□□□ -1.89
NcanP55066 Gm6797-201ENSMUST00000119440 512 ntBASIC3.25□□□□□ -1.89
NcanP55066 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC3.25□□□□□ -1.89
NcanP55066 Gm14815-201ENSMUST00000120060 488 ntBASIC3.25□□□□□ -1.89
NcanP55066 Gm15177-201ENSMUST00000120491 577 ntBASIC3.25□□□□□ -1.89
NcanP55066 Gm7327-201ENSMUST00000120925 652 ntBASIC3.25□□□□□ -1.89
NcanP55066 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC3.25□□□□□ -1.89
NcanP55066 Gm20689-201ENSMUST00000176033 279 ntBASIC3.25□□□□□ -1.89
NcanP55066 Gm24897-201ENSMUST00000179033 107 ntBASIC3.25□□□□□ -1.89
NcanP55066 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC3.25□□□□□ -1.89
NcanP55066 Snord116l12-201ENSMUST00000179816 94 ntBASIC3.25□□□□□ -1.89
NcanP55066 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.25□□□□□ -1.89
NcanP55066 Gm26701-201ENSMUST00000181571 234 ntBASIC3.25□□□□□ -1.89
NcanP55066 Gm27477-201ENSMUST00000184649 143 ntBASIC3.25□□□□□ -1.89
NcanP55066 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.25□□□□□ -1.89
NcanP55066 Gm29602-201ENSMUST00000186887 442 ntBASIC3.25□□□□□ -1.89
NcanP55066 Gm43556-201ENSMUST00000196186 681 ntBASIC3.25□□□□□ -1.89
NcanP55066 Gm34314-201ENSMUST00000203622 367 ntBASIC3.25□□□□□ -1.89
NcanP55066 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NcanP55066 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC3.25□□□□□ -1.89
NcanP55066 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NcanP55066 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.25□□□□□ -1.89
NcanP55066 AC160016.1-201ENSMUST00000215589 448 ntBASIC3.25□□□□□ -1.89
NcanP55066 AC158521.1-201ENSMUST00000225295 660 ntBASIC3.25□□□□□ -1.89
NcanP55066 AC160930.1-201ENSMUST00000227194 337 ntBASIC3.25□□□□□ -1.89
NcanP55066 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NcanP55066 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NcanP55066 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NcanP55066 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.25□□□□□ -1.89
NcanP55066 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
NcanP55066 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
NcanP55066 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.25□□□□□ -1.89
NcanP55066 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NcanP55066 Gm12225-201ENSMUST00000117995 298 ntBASIC3.24□□□□□ -1.89
NcanP55066 Gm13239-201ENSMUST00000119920 637 ntBASIC3.24□□□□□ -1.89
NcanP55066 Gm13720-201ENSMUST00000120741 196 ntBASIC3.24□□□□□ -1.89
NcanP55066 Gm15536-201ENSMUST00000121411 114 ntBASIC3.24□□□□□ -1.89
NcanP55066 Gm12858-201ENSMUST00000121913 208 ntBASIC3.24□□□□□ -1.89
NcanP55066 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
NcanP55066 Gm16274-201ENSMUST00000139251 592 ntBASIC3.24□□□□□ -1.89
NcanP55066 Gm26393-201ENSMUST00000157625 129 ntBASIC3.24□□□□□ -1.89
NcanP55066 Gm24532-201ENSMUST00000157951 286 ntBASIC3.24□□□□□ -1.89
NcanP55066 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC3.24□□□□□ -1.89
NcanP55066 Gm24968-201ENSMUST00000179817 107 ntBASIC3.24□□□□□ -1.89
NcanP55066 Gm26960-201ENSMUST00000182263 412 ntBASIC3.24□□□□□ -1.89
NcanP55066 Npn2-202ENSMUST00000189275 235 ntBASIC3.24□□□□□ -1.89
NcanP55066 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
NcanP55066 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC3.24□□□□□ -1.89
NcanP55066 Gm44076-201ENSMUST00000203072 520 ntBASIC3.24□□□□□ -1.89
NcanP55066 Gm45048-201ENSMUST00000207058 429 ntBASIC3.24□□□□□ -1.89
NcanP55066 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NcanP55066 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC3.24□□□□□ -1.89
NcanP55066 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC3.24□□□□□ -1.89
NcanP55066 AC156560.1-201ENSMUST00000221425 256 ntBASIC3.24□□□□□ -1.89
NcanP55066 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC3.24□□□□□ -1.89
NcanP55066 AC133176.1-201ENSMUST00000226668 219 ntBASIC3.24□□□□□ -1.89
NcanP55066 n-R5s176-201ENSMUST00000082683 109 ntBASIC3.24□□□□□ -1.89
NcanP55066 Gm25008-201ENSMUST00000083809 81 ntBASIC3.24□□□□□ -1.89
NcanP55066 AC154511.1-201ENSMUST00000222578 1587 ntBASIC3.24□□□□□ -1.89
NcanP55066 AC162910.1-201ENSMUST00000221219 1723 ntBASIC3.24□□□□□ -1.89
NcanP55066 Gm17976-201ENSMUST00000184037 1909 ntBASIC3.23□□□□□ -1.89
NcanP55066 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
NcanP55066 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
NcanP55066 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
NcanP55066 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms