Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm37045-201ENSMUST00000192016 2463 ntBASIC4.23□□□□□ -1.73
Usp4P35123 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Usp4P35123 Gm43834-201ENSMUST00000197097 4830 ntBASIC4.23□□□□□ -1.73
Usp4P35123 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC4.23□□□□□ -1.73
Usp4P35123 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Usp4P35123 Snora64-201ENSMUST00000104521 134 ntBASIC4.23□□□□□ -1.73
Usp4P35123 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Usp4P35123 Snord98-201ENSMUST00000116819 65 ntBASIC4.23□□□□□ -1.73
Usp4P35123 Gm14657-201ENSMUST00000117461 302 ntBASIC4.23□□□□□ -1.73
Usp4P35123 Gm13122-201ENSMUST00000118380 453 ntBASIC4.23□□□□□ -1.73
Usp4P35123 Gm12646-201ENSMUST00000119144 238 ntBASIC4.23□□□□□ -1.73
Usp4P35123 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.23□□□□□ -1.73
Usp4P35123 Gm14916-201ENSMUST00000121904 204 ntBASIC4.23□□□□□ -1.73
Usp4P35123 Gm22314-201ENSMUST00000158007 281 ntBASIC4.23□□□□□ -1.73
Usp4P35123 Gm22448-201ENSMUST00000179254 107 ntBASIC4.23□□□□□ -1.73
Usp4P35123 Gm24415-201ENSMUST00000180218 107 ntBASIC4.23□□□□□ -1.73
Usp4P35123 Gm35702-201ENSMUST00000198653 511 ntBASIC4.23□□□□□ -1.73
Usp4P35123 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Usp4P35123 Gm35876-201ENSMUST00000205044 459 ntBASIC4.23□□□□□ -1.73
Usp4P35123 AC124729.1-201ENSMUST00000225327 976 ntBASIC4.23□□□□□ -1.73
Usp4P35123 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Usp4P35123 Gm10042-201ENSMUST00000079884 78 ntBASIC4.23□□□□□ -1.73
Usp4P35123 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Usp4P35123 Gm18609-201ENSMUST00000203370 3601 ntBASIC4.23□□□□□ -1.73
Usp4P35123 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Usp4P35123 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
Usp4P35123 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
Usp4P35123 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.22□□□□□ -1.73
Usp4P35123 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Usp4P35123 Gm15773-201ENSMUST00000118665 1448 ntBASIC4.22□□□□□ -1.73
Usp4P35123 Gm20345-201ENSMUST00000175839 2414 ntBASIC4.22□□□□□ -1.73
Usp4P35123 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Usp4P35123 Gm23941-201ENSMUST00000101953 107 ntBASIC4.22□□□□□ -1.73
Usp4P35123 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC4.22□□□□□ -1.73
Usp4P35123 Gm15994-201ENSMUST00000118029 402 ntBASIC4.22□□□□□ -1.73
Usp4P35123 Gm12640-201ENSMUST00000120097 310 ntBASIC4.22□□□□□ -1.73
Usp4P35123 Gm14269-201ENSMUST00000120455 306 ntBASIC4.22□□□□□ -1.73
Usp4P35123 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC4.22□□□□□ -1.73
Usp4P35123 Gm13901-201ENSMUST00000137252 468 ntBASIC4.22□□□□□ -1.73
Usp4P35123 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC4.22□□□□□ -1.73
Usp4P35123 Gm23753-201ENSMUST00000157575 149 ntBASIC4.22□□□□□ -1.73
Usp4P35123 Gm23585-201ENSMUST00000157656 102 ntBASIC4.22□□□□□ -1.73
Usp4P35123 Gm23554-201ENSMUST00000157818 110 ntBASIC4.22□□□□□ -1.73
Usp4P35123 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC4.22□□□□□ -1.73
Usp4P35123 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Usp4P35123 Gm27899-201ENSMUST00000184715 64 ntBASIC4.22□□□□□ -1.73
Usp4P35123 Mir6715-201ENSMUST00000184990 57 ntBASIC4.22□□□□□ -1.73
Usp4P35123 Gm30280-201ENSMUST00000192214 262 ntBASIC4.22□□□□□ -1.73
Usp4P35123 Gm32340-201ENSMUST00000192883 259 ntBASIC4.22□□□□□ -1.73
Usp4P35123 Gm38088-201ENSMUST00000195829 241 ntBASIC4.22□□□□□ -1.73
Usp4P35123 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC4.22□□□□□ -1.73
Usp4P35123 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.22□□□□□ -1.73
Usp4P35123 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Usp4P35123 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Usp4P35123 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Usp4P35123 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC4.22□□□□□ -1.73
Usp4P35123 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Usp4P35123 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Usp4P35123 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Usp4P35123 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
Usp4P35123 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.21□□□□□ -1.73
Usp4P35123 AC167420.1-201ENSMUST00000222999 2121 ntBASIC4.21□□□□□ -1.74
Usp4P35123 Gm23063-201ENSMUST00000102350 93 ntBASIC4.21□□□□□ -1.74
Usp4P35123 Gm24788-201ENSMUST00000104283 156 ntBASIC4.21□□□□□ -1.74
Usp4P35123 Gm14296-202ENSMUST00000108931 750 ntBASIC4.21□□□□□ -1.74
Usp4P35123 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC4.21□□□□□ -1.74
Usp4P35123 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC4.21□□□□□ -1.74
Usp4P35123 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC4.21□□□□□ -1.74
Usp4P35123 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Usp4P35123 Gm23957-201ENSMUST00000157209 90 ntBASIC4.21□□□□□ -1.74
Usp4P35123 Gm22816-201ENSMUST00000157450 117 ntBASIC4.21□□□□□ -1.74
Usp4P35123 Gm22435-201ENSMUST00000158552 128 ntBASIC4.21□□□□□ -1.74
Usp4P35123 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC4.21□□□□□ -1.74
Usp4P35123 Gm26219-201ENSMUST00000175216 71 ntBASIC4.21□□□□□ -1.74
Usp4P35123 Gm28471-201ENSMUST00000185994 615 ntBASIC4.21□□□□□ -1.74
Usp4P35123 Gm28598-201ENSMUST00000186490 615 ntBASIC4.21□□□□□ -1.74
Usp4P35123 Gm29268-201ENSMUST00000188669 615 ntBASIC4.21□□□□□ -1.74
Usp4P35123 Gm29218-205ENSMUST00000190846 615 ntBASIC4.21□□□□□ -1.74
Usp4P35123 Gm28978-201ENSMUST00000191120 615 ntBASIC4.21□□□□□ -1.74
Usp4P35123 Gm37172-201ENSMUST00000191926 615 ntBASIC4.21□□□□□ -1.74
Usp4P35123 Gm43651-201ENSMUST00000199796 439 ntBASIC4.21□□□□□ -1.74
Usp4P35123 Gm45119-201ENSMUST00000207612 199 ntBASIC4.21□□□□□ -1.74
Usp4P35123 Gm20039-201ENSMUST00000210329 394 ntBASIC4.21□□□□□ -1.74
Usp4P35123 AC133189.2-201ENSMUST00000228527 392 ntBASIC4.21□□□□□ -1.74
Usp4P35123 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Usp4P35123 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Usp4P35123 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Usp4P35123 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC4.21□□□□□ -1.74
Usp4P35123 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Usp4P35123 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Usp4P35123 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
Usp4P35123 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Usp4P35123 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Usp4P35123 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Usp4P35123 Gm44435-201ENSMUST00000204379 4119 ntBASIC4.2□□□□□ -1.74
Usp4P35123 Mir551b-201ENSMUST00000102165 98 ntBASIC4.2□□□□□ -1.74
Usp4P35123 Gm25177-201ENSMUST00000122634 117 ntBASIC4.2□□□□□ -1.74
Usp4P35123 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Usp4P35123 Mir5710-201ENSMUST00000176884 69 ntBASIC4.2□□□□□ -1.74
Usp4P35123 Gm19498-201ENSMUST00000191128 331 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms