Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC2.55□□□□□ -2
Col2a1P28481 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC2.55□□□□□ -2
Col2a1P28481 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC2.55□□□□□ -2
Col2a1P28481 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC2.55□□□□□ -2
Col2a1P28481 Gm9628-201ENSMUST00000222169 725 ntBASIC2.55□□□□□ -2
Col2a1P28481 AC154552.4-201ENSMUST00000222171 151 ntBASIC2.55□□□□□ -2
Col2a1P28481 Gm23452-201ENSMUST00000083327 107 ntBASIC2.55□□□□□ -2
Col2a1P28481 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Col2a1P28481 Gm37387-201ENSMUST00000192201 1806 ntBASIC2.55□□□□□ -2
Col2a1P28481 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
Col2a1P28481 Gm36960-201ENSMUST00000195491 2035 ntBASIC2.55□□□□□ -2
Col2a1P28481 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
Col2a1P28481 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Col2a1P28481 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC2.54□□□□□ -2
Col2a1P28481 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Col2a1P28481 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Col2a1P28481 Gm13720-201ENSMUST00000120741 196 ntBASIC2.54□□□□□ -2
Col2a1P28481 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.54□□□□□ -2
Col2a1P28481 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC2.54□□□□□ -2
Col2a1P28481 Gm23980-201ENSMUST00000157135 158 ntBASIC2.54□□□□□ -2
Col2a1P28481 Gm24237-201ENSMUST00000157790 132 ntBASIC2.54□□□□□ -2
Col2a1P28481 Gm25902-201ENSMUST00000158493 318 ntBASIC2.54□□□□□ -2
Col2a1P28481 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Col2a1P28481 Gm22192-201ENSMUST00000175128 85 ntBASIC2.54□□□□□ -2
Col2a1P28481 Gm23289-201ENSMUST00000175615 108 ntBASIC2.54□□□□□ -2
Col2a1P28481 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC2.54□□□□□ -2
Col2a1P28481 Mir6411-201ENSMUST00000183556 108 ntBASIC2.54□□□□□ -2
Col2a1P28481 Gm28412-201ENSMUST00000187243 177 ntBASIC2.54□□□□□ -2
Col2a1P28481 Gm36966-201ENSMUST00000192217 413 ntBASIC2.54□□□□□ -2
Col2a1P28481 Mir3087-201ENSMUST00000199405 56 ntBASIC2.54□□□□□ -2
Col2a1P28481 Gm19237-201ENSMUST00000205036 1132 ntBASIC2.54□□□□□ -2
Col2a1P28481 Gm18453-201ENSMUST00000208000 626 ntBASIC2.54□□□□□ -2
Col2a1P28481 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Col2a1P28481 Gm18015-201ENSMUST00000214879 316 ntBASIC2.54□□□□□ -2
Col2a1P28481 AC101984.1-201ENSMUST00000219639 402 ntBASIC2.54□□□□□ -2
Col2a1P28481 AC153526.1-201ENSMUST00000219750 190 ntBASIC2.54□□□□□ -2
Col2a1P28481 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC2.54□□□□□ -2
Col2a1P28481 AC130823.2-201ENSMUST00000226169 290 ntBASIC2.54□□□□□ -2
Col2a1P28481 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC2.54□□□□□ -2
Col2a1P28481 Gm25632-201ENSMUST00000083112 85 ntBASIC2.54□□□□□ -2
Col2a1P28481 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Col2a1P28481 Gm19074-201ENSMUST00000218915 1429 ntBASIC2.54□□□□□ -2
Col2a1P28481 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Col2a1P28481 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Col2a1P28481 BC051076-202ENSMUST00000199477 2868 ntBASIC2.53□□□□□ -2
Col2a1P28481 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Col2a1P28481 Mir542-201ENSMUST00000102186 85 ntBASIC2.53□□□□□ -2
Col2a1P28481 Mir466n-201ENSMUST00000104798 94 ntBASIC2.53□□□□□ -2
Col2a1P28481 Gm14163-201ENSMUST00000117342 217 ntBASIC2.53□□□□□ -2
Col2a1P28481 Gm16100-201ENSMUST00000120489 231 ntBASIC2.53□□□□□ -2
Col2a1P28481 Gm25052-201ENSMUST00000122661 158 ntBASIC2.53□□□□□ -2
Col2a1P28481 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC2.53□□□□□ -2
Col2a1P28481 Gm18417-201ENSMUST00000176564 648 ntBASIC2.53□□□□□ -2
Col2a1P28481 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC2.53□□□□□ -2
Col2a1P28481 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC2.53□□□□□ -2
Col2a1P28481 Gm27443-201ENSMUST00000184660 98 ntBASIC2.53□□□□□ -2
Col2a1P28481 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.53□□□□□ -2
Col2a1P28481 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC2.53□□□□□ -2
Col2a1P28481 Gm29817-201ENSMUST00000210098 172 ntBASIC2.53□□□□□ -2
Col2a1P28481 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC2.53□□□□□ -2
Col2a1P28481 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Col2a1P28481 AC131085.1-201ENSMUST00000224746 656 ntBASIC2.53□□□□□ -2
Col2a1P28481 CT009550.5-201ENSMUST00000226286 382 ntBASIC2.53□□□□□ -2
Col2a1P28481 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC2.53□□□□□ -2
Col2a1P28481 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC2.53□□□□□ -2
Col2a1P28481 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC2.53□□□□□ -2
Col2a1P28481 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC2.53□□□□□ -2
Col2a1P28481 Gm24928-201ENSMUST00000083399 107 ntBASIC2.53□□□□□ -2
Col2a1P28481 Gm25897-201ENSMUST00000083709 107 ntBASIC2.53□□□□□ -2
Col2a1P28481 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.53□□□□□ -2
Col2a1P28481 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Col2a1P28481 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC2.53□□□□□ -2
Col2a1P28481 Gm43201-201ENSMUST00000195925 3416 ntBASIC2.53□□□□□ -2
Col2a1P28481 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Col2a1P28481 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC2.53□□□□□ -2
Col2a1P28481 Mir758-201ENSMUST00000103260 81 ntBASIC2.52□□□□□ -2.01
Col2a1P28481 Gm25421-201ENSMUST00000104218 164 ntBASIC2.52□□□□□ -2.01
Col2a1P28481 Gm8858-201ENSMUST00000118259 342 ntBASIC2.52□□□□□ -2.01
Col2a1P28481 Gm14982-201ENSMUST00000121102 442 ntBASIC2.52□□□□□ -2.01
Col2a1P28481 Gm11891-201ENSMUST00000121241 619 ntBASIC2.52□□□□□ -2.01
Col2a1P28481 Gm16510-201ENSMUST00000153501 249 ntBASIC2.52□□□□□ -2.01
Col2a1P28481 Gm24925-201ENSMUST00000178157 107 ntBASIC2.52□□□□□ -2.01
Col2a1P28481 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Col2a1P28481 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC2.52□□□□□ -2.01
Col2a1P28481 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC2.52□□□□□ -2.01
Col2a1P28481 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Col2a1P28481 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC2.52□□□□□ -2.01
Col2a1P28481 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Col2a1P28481 Gm44449-201ENSMUST00000203610 153 ntBASIC2.52□□□□□ -2.01
Col2a1P28481 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC2.52□□□□□ -2.01
Col2a1P28481 Gm9375-201ENSMUST00000208899 903 ntBASIC2.52□□□□□ -2.01
Col2a1P28481 Gm45658-201ENSMUST00000209197 580 ntBASIC2.52□□□□□ -2.01
Col2a1P28481 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC2.52□□□□□ -2.01
Col2a1P28481 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.52□□□□□ -2.01
Col2a1P28481 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC2.52□□□□□ -2.01
Col2a1P28481 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.52□□□□□ -2.01
Col2a1P28481 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Col2a1P28481 Gm22304-201ENSMUST00000082688 129 ntBASIC2.52□□□□□ -2.01
Col2a1P28481 Gm23677-201ENSMUST00000083156 104 ntBASIC2.52□□□□□ -2.01
Col2a1P28481 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms