Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Sdc1P18828 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Sdc1P18828 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Sdc1P18828 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.21□□□□□ -2.06
Sdc1P18828 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Sdc1P18828 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC2.21□□□□□ -2.06
Sdc1P18828 Gm37630-201ENSMUST00000194210 1456 ntBASIC2.2□□□□□ -2.06
Sdc1P18828 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
Sdc1P18828 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Sdc1P18828 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.2□□□□□ -2.06
Sdc1P18828 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
Sdc1P18828 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC2.2□□□□□ -2.06
Sdc1P18828 Gm15783-201ENSMUST00000117521 633 ntBASIC2.2□□□□□ -2.06
Sdc1P18828 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC2.2□□□□□ -2.06
Sdc1P18828 Gm13510-201ENSMUST00000118659 429 ntBASIC2.2□□□□□ -2.06
Sdc1P18828 Gm14359-201ENSMUST00000118883 424 ntBASIC2.2□□□□□ -2.06
Sdc1P18828 Gm12156-201ENSMUST00000119188 554 ntBASIC2.2□□□□□ -2.06
Sdc1P18828 Gm14656-201ENSMUST00000120342 502 ntBASIC2.2□□□□□ -2.06
Sdc1P18828 Gm14360-201ENSMUST00000120670 393 ntBASIC2.2□□□□□ -2.06
Sdc1P18828 Gm9498-201ENSMUST00000140849 291 ntBASIC2.2□□□□□ -2.06
Sdc1P18828 Gm22187-201ENSMUST00000157819 129 ntBASIC2.2□□□□□ -2.06
Sdc1P18828 Gm20718-201ENSMUST00000176058 259 ntBASIC2.2□□□□□ -2.06
Sdc1P18828 Gm25817-201ENSMUST00000177758 121 ntBASIC2.2□□□□□ -2.06
Sdc1P18828 Gm24766-201ENSMUST00000179182 121 ntBASIC2.2□□□□□ -2.06
Sdc1P18828 Gm28666-201ENSMUST00000186649 274 ntBASIC2.2□□□□□ -2.06
Sdc1P18828 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
Sdc1P18828 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC2.2□□□□□ -2.06
Sdc1P18828 Igkv1-115-201ENSMUST00000198714 302 ntBASIC2.2□□□□□ -2.06
Sdc1P18828 Gm2059-201ENSMUST00000212025 287 ntBASIC2.2□□□□□ -2.06
Sdc1P18828 AL929285.1-201ENSMUST00000215522 229 ntBASIC2.2□□□□□ -2.06
Sdc1P18828 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC2.2□□□□□ -2.06
Sdc1P18828 AC158803.1-201ENSMUST00000219495 316 ntBASIC2.2□□□□□ -2.06
Sdc1P18828 Gm46994-201ENSMUST00000221523 219 ntBASIC2.2□□□□□ -2.06
Sdc1P18828 Gm5955-201ENSMUST00000222712 219 ntBASIC2.2□□□□□ -2.06
Sdc1P18828 CT030705.1-201ENSMUST00000223971 533 ntBASIC2.2□□□□□ -2.06
Sdc1P18828 AC132881.2-201ENSMUST00000225474 709 ntBASIC2.2□□□□□ -2.06
Sdc1P18828 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC2.2□□□□□ -2.06
Sdc1P18828 Olfr815-201ENSMUST00000071557 951 ntBASIC2.2□□□□□ -2.06
Sdc1P18828 Gm26458-201ENSMUST00000082832 128 ntBASIC2.2□□□□□ -2.06
Sdc1P18828 Snord104-201ENSMUST00000083192 70 ntBASIC2.2□□□□□ -2.06
Sdc1P18828 Gm23096-201ENSMUST00000083447 107 ntBASIC2.2□□□□□ -2.06
Sdc1P18828 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC2.2□□□□□ -2.06
Sdc1P18828 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
Sdc1P18828 AC125532.1-201ENSMUST00000216210 2334 ntBASIC2.2□□□□□ -2.06
Sdc1P18828 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Sdc1P18828 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Sdc1P18828 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Sdc1P18828 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Sdc1P18828 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.19□□□□□ -2.06
Sdc1P18828 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Sdc1P18828 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Sdc1P18828 Gm5596-201ENSMUST00000207988 2421 ntBASIC2.19□□□□□ -2.06
Sdc1P18828 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Sdc1P18828 Gm25466-201ENSMUST00000103995 132 ntBASIC2.19□□□□□ -2.06
Sdc1P18828 Gm25317-201ENSMUST00000116824 129 ntBASIC2.19□□□□□ -2.06
Sdc1P18828 Gm14352-201ENSMUST00000119250 449 ntBASIC2.19□□□□□ -2.06
Sdc1P18828 Gm2020-201ENSMUST00000145242 579 ntBASIC2.19□□□□□ -2.06
Sdc1P18828 Gm23033-201ENSMUST00000157996 134 ntBASIC2.19□□□□□ -2.06
Sdc1P18828 Gm24681-201ENSMUST00000158760 107 ntBASIC2.19□□□□□ -2.06
Sdc1P18828 Gm9071-201ENSMUST00000165915 474 ntBASIC2.19□□□□□ -2.06
Sdc1P18828 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.19□□□□□ -2.06
Sdc1P18828 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.19□□□□□ -2.06
Sdc1P18828 Gm20672-201ENSMUST00000176605 261 ntBASIC2.19□□□□□ -2.06
Sdc1P18828 Gm21842-201ENSMUST00000177552 498 ntBASIC2.19□□□□□ -2.06
Sdc1P18828 Gm21626-201ENSMUST00000177791 498 ntBASIC2.19□□□□□ -2.06
Sdc1P18828 Gm21562-201ENSMUST00000177888 498 ntBASIC2.19□□□□□ -2.06
Sdc1P18828 Gm21539-201ENSMUST00000177925 498 ntBASIC2.19□□□□□ -2.06
Sdc1P18828 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Sdc1P18828 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Sdc1P18828 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Sdc1P18828 Gm17522-201ENSMUST00000178144 498 ntBASIC2.19□□□□□ -2.06
Sdc1P18828 Gm21599-201ENSMUST00000178249 498 ntBASIC2.19□□□□□ -2.06
Sdc1P18828 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Sdc1P18828 Gm21914-201ENSMUST00000178452 498 ntBASIC2.19□□□□□ -2.06
Sdc1P18828 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Sdc1P18828 Gm21723-201ENSMUST00000178692 498 ntBASIC2.19□□□□□ -2.06
Sdc1P18828 Gm21916-201ENSMUST00000178771 498 ntBASIC2.19□□□□□ -2.06
Sdc1P18828 Gm21801-201ENSMUST00000178865 498 ntBASIC2.19□□□□□ -2.06
Sdc1P18828 Gm21633-201ENSMUST00000178941 498 ntBASIC2.19□□□□□ -2.06
Sdc1P18828 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Sdc1P18828 Gm21821-201ENSMUST00000179646 498 ntBASIC2.19□□□□□ -2.06
Sdc1P18828 Gm21588-201ENSMUST00000180074 498 ntBASIC2.19□□□□□ -2.06
Sdc1P18828 Gm21780-201ENSMUST00000180128 498 ntBASIC2.19□□□□□ -2.06
Sdc1P18828 Gm21572-201ENSMUST00000180134 498 ntBASIC2.19□□□□□ -2.06
Sdc1P18828 Gm21529-201ENSMUST00000180175 498 ntBASIC2.19□□□□□ -2.06
Sdc1P18828 Gm27786-201ENSMUST00000184337 70 ntBASIC2.19□□□□□ -2.06
Sdc1P18828 Gm28163-201ENSMUST00000187099 325 ntBASIC2.19□□□□□ -2.06
Sdc1P18828 Gm29370-202ENSMUST00000187476 499 ntBASIC2.19□□□□□ -2.06
Sdc1P18828 Gm37319-201ENSMUST00000193500 636 ntBASIC2.19□□□□□ -2.06
Sdc1P18828 Gm37743-201ENSMUST00000194645 376 ntBASIC2.19□□□□□ -2.06
Sdc1P18828 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.19□□□□□ -2.06
Sdc1P18828 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Sdc1P18828 Gm18635-201ENSMUST00000199020 1060 ntBASIC2.19□□□□□ -2.06
Sdc1P18828 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC2.19□□□□□ -2.06
Sdc1P18828 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC2.19□□□□□ -2.06
Sdc1P18828 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC2.19□□□□□ -2.06
Sdc1P18828 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Sdc1P18828 Gm19326-201ENSMUST00000219818 326 ntBASIC2.19□□□□□ -2.06
Sdc1P18828 AC141642.1-201ENSMUST00000220598 229 ntBASIC2.19□□□□□ -2.06
Sdc1P18828 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms