Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RaraP11416 Gm650-201ENSMUST00000144428 1551 ntBASIC4.77□□□□□ -1.65
RaraP11416 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RaraP11416 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RaraP11416 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
RaraP11416 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RaraP11416 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
RaraP11416 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
RaraP11416 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
RaraP11416 Gm15206-201ENSMUST00000119143 454 ntBASIC4.76□□□□□ -1.65
RaraP11416 Gm14875-201ENSMUST00000120881 319 ntBASIC4.76□□□□□ -1.65
RaraP11416 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC4.76□□□□□ -1.65
RaraP11416 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC4.76□□□□□ -1.65
RaraP11416 Gm26186-201ENSMUST00000157689 125 ntBASIC4.76□□□□□ -1.65
RaraP11416 Gm25654-201ENSMUST00000158467 88 ntBASIC4.76□□□□□ -1.65
RaraP11416 Gm10075-201ENSMUST00000162030 545 ntBASIC4.76□□□□□ -1.65
RaraP11416 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
RaraP11416 Gm27545-201ENSMUST00000184755 202 ntBASIC4.76□□□□□ -1.65
RaraP11416 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC4.76□□□□□ -1.65
RaraP11416 Gm9696-202ENSMUST00000191541 830 ntBASIC4.76□□□□□ -1.65
RaraP11416 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC4.76□□□□□ -1.65
RaraP11416 Gm43524-201ENSMUST00000197278 298 ntBASIC4.76□□□□□ -1.65
RaraP11416 Gm34091-201ENSMUST00000200875 604 ntBASIC4.76□□□□□ -1.65
RaraP11416 Gm7041-201ENSMUST00000201227 524 ntBASIC4.76□□□□□ -1.65
RaraP11416 Olfr1285-201ENSMUST00000208523 903 ntBASIC4.76□□□□□ -1.65
RaraP11416 Gm18016-201ENSMUST00000216119 801 ntBASIC4.76□□□□□ -1.65
RaraP11416 AC145736.2-201ENSMUST00000216305 365 ntBASIC4.76□□□□□ -1.65
RaraP11416 AC158805.1-201ENSMUST00000218197 2631 ntBASIC4.76□□□□□ -1.65
RaraP11416 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC4.76□□□□□ -1.65
RaraP11416 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RaraP11416 Apoo-ps-201ENSMUST00000061241 586 ntBASIC4.76□□□□□ -1.65
RaraP11416 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC4.76□□□□□ -1.65
RaraP11416 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RaraP11416 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
RaraP11416 Gm36969-201ENSMUST00000194551 2809 ntBASIC4.76□□□□□ -1.65
RaraP11416 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
RaraP11416 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
RaraP11416 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
RaraP11416 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC4.75□□□□□ -1.65
RaraP11416 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
RaraP11416 Gm15002-201ENSMUST00000118406 452 ntBASIC4.75□□□□□ -1.65
RaraP11416 Gm12722-201ENSMUST00000118507 493 ntBASIC4.75□□□□□ -1.65
RaraP11416 Gm12719-201ENSMUST00000118859 241 ntBASIC4.75□□□□□ -1.65
RaraP11416 Gm14846-201ENSMUST00000121868 216 ntBASIC4.75□□□□□ -1.65
RaraP11416 Gm24481-201ENSMUST00000157210 102 ntBASIC4.75□□□□□ -1.65
RaraP11416 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
RaraP11416 Gm27940-201ENSMUST00000184449 98 ntBASIC4.75□□□□□ -1.65
RaraP11416 Gm27421-201ENSMUST00000184729 167 ntBASIC4.75□□□□□ -1.65
RaraP11416 Gm29330-201ENSMUST00000190032 699 ntBASIC4.75□□□□□ -1.65
RaraP11416 Gm42990-201ENSMUST00000199231 312 ntBASIC4.75□□□□□ -1.65
RaraP11416 Gm4714-201ENSMUST00000203395 279 ntBASIC4.75□□□□□ -1.65
RaraP11416 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC4.75□□□□□ -1.65
RaraP11416 Gm26121-201ENSMUST00000083364 162 ntBASIC4.75□□□□□ -1.65
RaraP11416 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
RaraP11416 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
RaraP11416 Synpr-207ENSMUST00000223583 3362 ntBASIC4.75□□□□□ -1.65
RaraP11416 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
RaraP11416 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
RaraP11416 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
RaraP11416 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
RaraP11416 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
RaraP11416 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
RaraP11416 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.74□□□□□ -1.65
RaraP11416 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.74□□□□□ -1.65
RaraP11416 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.74□□□□□ -1.65
RaraP11416 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RaraP11416 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RaraP11416 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
RaraP11416 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
RaraP11416 Gm22496-201ENSMUST00000104493 88 ntBASIC4.74□□□□□ -1.65
RaraP11416 Gm13355-201ENSMUST00000117996 317 ntBASIC4.74□□□□□ -1.65
RaraP11416 Gm13149-201ENSMUST00000122071 339 ntBASIC4.74□□□□□ -1.65
RaraP11416 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC4.74□□□□□ -1.65
RaraP11416 Gm15905-201ENSMUST00000137042 298 ntBASIC4.74□□□□□ -1.65
RaraP11416 Gm23232-201ENSMUST00000157300 105 ntBASIC4.74□□□□□ -1.65
RaraP11416 Gm25175-201ENSMUST00000178712 79 ntBASIC4.74□□□□□ -1.65
RaraP11416 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.74□□□□□ -1.65
RaraP11416 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC4.74□□□□□ -1.65
RaraP11416 Gm27540-201ENSMUST00000184950 187 ntBASIC4.74□□□□□ -1.65
RaraP11416 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC4.74□□□□□ -1.65
RaraP11416 Gm29657-201ENSMUST00000189807 342 ntBASIC4.74□□□□□ -1.65
RaraP11416 Gm28978-201ENSMUST00000191120 615 ntBASIC4.74□□□□□ -1.65
RaraP11416 Gm42830-201ENSMUST00000196642 313 ntBASIC4.74□□□□□ -1.65
RaraP11416 Gm9402-201ENSMUST00000196849 388 ntBASIC4.74□□□□□ -1.65
RaraP11416 Gm43583-201ENSMUST00000199235 303 ntBASIC4.74□□□□□ -1.65
RaraP11416 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC4.74□□□□□ -1.65
RaraP11416 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC4.74□□□□□ -1.65
RaraP11416 Gm45236-201ENSMUST00000208632 229 ntBASIC4.74□□□□□ -1.65
RaraP11416 AC126267.1-201ENSMUST00000214282 284 ntBASIC4.74□□□□□ -1.65
RaraP11416 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.74□□□□□ -1.65
RaraP11416 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.74□□□□□ -1.65
RaraP11416 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
RaraP11416 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RaraP11416 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
RaraP11416 AC115047.2-201ENSMUST00000214421 1848 ntBASIC4.74□□□□□ -1.65
RaraP11416 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RaraP11416 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RaraP11416 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RaraP11416 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
RaraP11416 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 104 ms