Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm22444-201ENSMUST00000093693 108 ntBASIC1.9□□□□□ -2.11
Col1a1P11087 Gm22170-201ENSMUST00000097247 107 ntBASIC1.9□□□□□ -2.11
Col1a1P11087 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
Col1a1P11087 Gm44624-201ENSMUST00000208700 2278 ntBASIC1.9□□□□□ -2.11
Col1a1P11087 Gm12697-201ENSMUST00000118008 667 ntBASIC1.89□□□□□ -2.11
Col1a1P11087 Gm14771-201ENSMUST00000118249 203 ntBASIC1.89□□□□□ -2.11
Col1a1P11087 Gm7209-201ENSMUST00000122339 333 ntBASIC1.89□□□□□ -2.11
Col1a1P11087 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Col1a1P11087 Gm29658-201ENSMUST00000185404 230 ntBASIC1.89□□□□□ -2.11
Col1a1P11087 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC1.89□□□□□ -2.11
Col1a1P11087 Gm38018-201ENSMUST00000195651 540 ntBASIC1.89□□□□□ -2.11
Col1a1P11087 Gm43316-201ENSMUST00000197252 1295 ntBASIC1.89□□□□□ -2.11
Col1a1P11087 Gm43090-201ENSMUST00000202459 314 ntBASIC1.89□□□□□ -2.11
Col1a1P11087 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC1.89□□□□□ -2.11
Col1a1P11087 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
Col1a1P11087 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.89□□□□□ -2.11
Col1a1P11087 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.88□□□□□ -2.11
Col1a1P11087 Gm13194-201ENSMUST00000142299 311 ntBASIC1.88□□□□□ -2.11
Col1a1P11087 Gm27271-201ENSMUST00000183509 170 ntBASIC1.88□□□□□ -2.11
Col1a1P11087 Mir6240-201ENSMUST00000184281 117 ntBASIC1.88□□□□□ -2.11
Col1a1P11087 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC1.88□□□□□ -2.11
Col1a1P11087 Gm28802-201ENSMUST00000188624 944 ntBASIC1.88□□□□□ -2.11
Col1a1P11087 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Col1a1P11087 Gm43431-201ENSMUST00000198577 340 ntBASIC1.88□□□□□ -2.11
Col1a1P11087 Gm42625-201ENSMUST00000198611 922 ntBASIC1.88□□□□□ -2.11
Col1a1P11087 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC1.88□□□□□ -2.11
Col1a1P11087 AL662807.1-201ENSMUST00000224183 126 ntBASIC1.88□□□□□ -2.11
Col1a1P11087 AC155167.3-201ENSMUST00000226349 217 ntBASIC1.88□□□□□ -2.11
Col1a1P11087 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Col1a1P11087 AC116656.1-201ENSMUST00000227040 755 ntBASIC1.88□□□□□ -2.11
Col1a1P11087 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Col1a1P11087 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Col1a1P11087 Gm11843-201ENSMUST00000118984 425 ntBASIC1.88□□□□□ -2.11
Col1a1P11087 Gm12383-201ENSMUST00000120628 760 ntBASIC1.88□□□□□ -2.11
Col1a1P11087 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC1.88□□□□□ -2.11
Col1a1P11087 Gm2855-201ENSMUST00000166765 456 ntBASIC1.88□□□□□ -2.11
Col1a1P11087 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Col1a1P11087 Gm29553-201ENSMUST00000189692 279 ntBASIC1.88□□□□□ -2.11
Col1a1P11087 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC1.87□□□□□ -2.11
Col1a1P11087 Gm12550-201ENSMUST00000118478 329 ntBASIC1.87□□□□□ -2.11
Col1a1P11087 Gm25945-201ENSMUST00000122484 135 ntBASIC1.87□□□□□ -2.11
Col1a1P11087 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Col1a1P11087 Gm9785-202ENSMUST00000144563 593 ntBASIC1.87□□□□□ -2.11
Col1a1P11087 Mir6238-201ENSMUST00000184140 129 ntBASIC1.87□□□□□ -2.11
Col1a1P11087 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC1.87□□□□□ -2.11
Col1a1P11087 Gm37708-201ENSMUST00000192337 895 ntBASIC1.87□□□□□ -2.11
Col1a1P11087 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.87□□□□□ -2.11
Col1a1P11087 AC157017.1-201ENSMUST00000220148 364 ntBASIC1.87□□□□□ -2.11
Col1a1P11087 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Col1a1P11087 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Col1a1P11087 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
Col1a1P11087 Gm22494-201ENSMUST00000104495 128 ntBASIC1.86□□□□□ -2.11
Col1a1P11087 Gm13510-201ENSMUST00000118659 429 ntBASIC1.86□□□□□ -2.11
Col1a1P11087 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
Col1a1P11087 Mir6379-201ENSMUST00000183392 115 ntBASIC1.86□□□□□ -2.11
Col1a1P11087 Mir6985-201ENSMUST00000184641 61 ntBASIC1.86□□□□□ -2.11
Col1a1P11087 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC1.86□□□□□ -2.11
Col1a1P11087 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC1.86□□□□□ -2.11
Col1a1P11087 Gm43193-201ENSMUST00000197732 441 ntBASIC1.86□□□□□ -2.11
Col1a1P11087 Mir6962-201ENSMUST00000199512 63 ntBASIC1.86□□□□□ -2.11
Col1a1P11087 Gm19457-201ENSMUST00000200995 448 ntBASIC1.86□□□□□ -2.11
Col1a1P11087 Gm45687-201ENSMUST00000209454 155 ntBASIC1.86□□□□□ -2.11
Col1a1P11087 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC1.86□□□□□ -2.11
Col1a1P11087 AC165437.1-201ENSMUST00000228640 536 ntBASIC1.86□□□□□ -2.11
Col1a1P11087 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Col1a1P11087 Gm23407-201ENSMUST00000082538 91 ntBASIC1.86□□□□□ -2.11
Col1a1P11087 Gm23850-201ENSMUST00000083830 169 ntBASIC1.86□□□□□ -2.11
Col1a1P11087 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.86□□□□□ -2.11
Col1a1P11087 Gm37331-201ENSMUST00000192367 3375 ntBASIC1.85□□□□□ -2.11
Col1a1P11087 Gm26301-201ENSMUST00000104813 95 ntBASIC1.85□□□□□ -2.11
Col1a1P11087 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC1.85□□□□□ -2.11
Col1a1P11087 Gm11356-201ENSMUST00000118974 192 ntBASIC1.85□□□□□ -2.11
Col1a1P11087 Gm12891-201ENSMUST00000119358 240 ntBASIC1.85□□□□□ -2.11
Col1a1P11087 Gm15452-201ENSMUST00000119877 240 ntBASIC1.85□□□□□ -2.11
Col1a1P11087 Gm15147-201ENSMUST00000122263 483 ntBASIC1.85□□□□□ -2.11
Col1a1P11087 Snora81-201ENSMUST00000157310 178 ntBASIC1.85□□□□□ -2.11
Col1a1P11087 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Col1a1P11087 Gm5731-201ENSMUST00000190969 481 ntBASIC1.85□□□□□ -2.11
Col1a1P11087 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC1.85□□□□□ -2.11
Col1a1P11087 Gm38329-201ENSMUST00000193473 427 ntBASIC1.85□□□□□ -2.11
Col1a1P11087 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.85□□□□□ -2.11
Col1a1P11087 Gm43513-201ENSMUST00000199779 1076 ntBASIC1.85□□□□□ -2.11
Col1a1P11087 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC1.85□□□□□ -2.11
Col1a1P11087 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC1.85□□□□□ -2.11
Col1a1P11087 CT030194.2-201ENSMUST00000225752 379 ntBASIC1.85□□□□□ -2.11
Col1a1P11087 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC1.85□□□□□ -2.11
Col1a1P11087 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Col1a1P11087 Gm24280-201ENSMUST00000104237 134 ntBASIC1.84□□□□□ -2.11
Col1a1P11087 Gm23336-201ENSMUST00000117023 123 ntBASIC1.84□□□□□ -2.11
Col1a1P11087 Gm12765-201ENSMUST00000117273 615 ntBASIC1.84□□□□□ -2.11
Col1a1P11087 Gm12706-201ENSMUST00000121588 698 ntBASIC1.84□□□□□ -2.11
Col1a1P11087 Gm22766-201ENSMUST00000158372 99 ntBASIC1.84□□□□□ -2.11
Col1a1P11087 Gm6395-201ENSMUST00000167639 691 ntBASIC1.84□□□□□ -2.11
Col1a1P11087 Gm17186-201ENSMUST00000171742 456 ntBASIC1.84□□□□□ -2.11
Col1a1P11087 Gm8151-201ENSMUST00000184817 871 ntBASIC1.84□□□□□ -2.11
Col1a1P11087 Gm18406-201ENSMUST00000185872 669 ntBASIC1.84□□□□□ -2.11
Col1a1P11087 Gm37523-201ENSMUST00000194901 412 ntBASIC1.84□□□□□ -2.11
Col1a1P11087 Gm43224-201ENSMUST00000201567 898 ntBASIC1.84□□□□□ -2.11
Col1a1P11087 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Col1a1P11087 AC122465.3-201ENSMUST00000221644 355 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms