Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC4.01□□□□□ -1.77
Hoxd3P09027 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC4.01□□□□□ -1.77
Hoxd3P09027 Gm43408-201ENSMUST00000198263 440 ntBASIC4.01□□□□□ -1.77
Hoxd3P09027 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC4.01□□□□□ -1.77
Hoxd3P09027 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Hoxd3P09027 Gm45860-201ENSMUST00000212700 334 ntBASIC4.01□□□□□ -1.77
Hoxd3P09027 AC140785.1-201ENSMUST00000217782 383 ntBASIC4.01□□□□□ -1.77
Hoxd3P09027 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Hoxd3P09027 n-R5s205-201ENSMUST00000083149 125 ntBASIC4.01□□□□□ -1.77
Hoxd3P09027 Gm23264-201ENSMUST00000083372 107 ntBASIC4.01□□□□□ -1.77
Hoxd3P09027 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Hoxd3P09027 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Hoxd3P09027 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
Hoxd3P09027 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hoxd3P09027 Gm43230-201ENSMUST00000200980 2129 ntBASIC4.01□□□□□ -1.77
Hoxd3P09027 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hoxd3P09027 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
Hoxd3P09027 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hoxd3P09027 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hoxd3P09027 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hoxd3P09027 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
Hoxd3P09027 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hoxd3P09027 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
Hoxd3P09027 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Hoxd3P09027 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC4□□□□□ -1.77
Hoxd3P09027 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
Hoxd3P09027 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Hoxd3P09027 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Hoxd3P09027 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Hoxd3P09027 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC4□□□□□ -1.77
Hoxd3P09027 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Hoxd3P09027 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Hoxd3P09027 AC160931.3-201ENSMUST00000222111 2267 ntBASIC4□□□□□ -1.77
Hoxd3P09027 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC4□□□□□ -1.77
Hoxd3P09027 Gm26081-201ENSMUST00000104068 132 ntBASIC4□□□□□ -1.77
Hoxd3P09027 Gm25418-201ENSMUST00000104214 129 ntBASIC4□□□□□ -1.77
Hoxd3P09027 Gm6762-201ENSMUST00000121769 289 ntBASIC4□□□□□ -1.77
Hoxd3P09027 Gm16354-201ENSMUST00000155376 150 ntBASIC4□□□□□ -1.77
Hoxd3P09027 Gm23327-201ENSMUST00000157420 78 ntBASIC4□□□□□ -1.77
Hoxd3P09027 Gm24720-201ENSMUST00000157518 166 ntBASIC4□□□□□ -1.77
Hoxd3P09027 Gm24213-201ENSMUST00000158255 258 ntBASIC4□□□□□ -1.77
Hoxd3P09027 Gm25603-201ENSMUST00000158361 105 ntBASIC4□□□□□ -1.77
Hoxd3P09027 Gm24224-201ENSMUST00000158828 258 ntBASIC4□□□□□ -1.77
Hoxd3P09027 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC4□□□□□ -1.77
Hoxd3P09027 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC4□□□□□ -1.77
Hoxd3P09027 Gm44337-201ENSMUST00000196553 114 ntBASIC4□□□□□ -1.77
Hoxd3P09027 Gm4321-201ENSMUST00000200520 442 ntBASIC4□□□□□ -1.77
Hoxd3P09027 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC4□□□□□ -1.77
Hoxd3P09027 Gm44182-201ENSMUST00000204052 115 ntBASIC4□□□□□ -1.77
Hoxd3P09027 Gm19244-201ENSMUST00000204340 253 ntBASIC4□□□□□ -1.77
Hoxd3P09027 Gm45445-201ENSMUST00000209586 232 ntBASIC4□□□□□ -1.77
Hoxd3P09027 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC4□□□□□ -1.77
Hoxd3P09027 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC4□□□□□ -1.77
Hoxd3P09027 Gm18617-201ENSMUST00000222311 259 ntBASIC4□□□□□ -1.77
Hoxd3P09027 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Hoxd3P09027 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Hoxd3P09027 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
Hoxd3P09027 Gm43508-201ENSMUST00000197251 3783 ntBASIC4□□□□□ -1.77
Hoxd3P09027 Gm37606-201ENSMUST00000191816 3116 ntBASIC4□□□□□ -1.77
Hoxd3P09027 Gm37941-201ENSMUST00000192170 2309 ntBASIC4□□□□□ -1.77
Hoxd3P09027 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
Hoxd3P09027 AC112274.1-201ENSMUST00000218957 4274 ntBASIC4□□□□□ -1.77
Hoxd3P09027 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Hoxd3P09027 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Hoxd3P09027 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC3.99□□□□□ -1.77
Hoxd3P09027 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Hoxd3P09027 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm37479-201ENSMUST00000194169 3841 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 AC153532.2-201ENSMUST00000219753 3844 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Hoxd3P09027 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
Hoxd3P09027 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm25089-201ENSMUST00000102015 79 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm24235-201ENSMUST00000104319 129 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Mir872-201ENSMUST00000104728 81 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Mir1b-201ENSMUST00000117012 122 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm25424-201ENSMUST00000157612 58 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm2862-201ENSMUST00000161524 328 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Mir5112-201ENSMUST00000174897 60 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm25840-201ENSMUST00000177821 79 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm24952-201ENSMUST00000177909 79 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm23682-201ENSMUST00000178146 79 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm24652-201ENSMUST00000178223 79 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm22629-201ENSMUST00000178272 79 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm24021-201ENSMUST00000178435 79 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm22274-201ENSMUST00000178441 79 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm22050-201ENSMUST00000178442 79 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm23688-201ENSMUST00000178502 79 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm23944-201ENSMUST00000178607 79 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm26283-201ENSMUST00000178625 79 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm25452-201ENSMUST00000178776 79 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm23286-201ENSMUST00000178963 79 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm22640-201ENSMUST00000179035 79 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm25984-201ENSMUST00000179129 79 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm25585-201ENSMUST00000179469 79 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm26374-201ENSMUST00000179737 79 ntBASIC3.99□□□□□ -1.77
Hoxd3P09027 Gm24040-201ENSMUST00000179786 79 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 377.6 ms