Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm22519-201ENSMUST00000158270 178 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Gm3221-201ENSMUST00000164869 440 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Col5a1O88207 Gm2930-201ENSMUST00000170403 474 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Gm18416-201ENSMUST00000175635 1003 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Gm28384-201ENSMUST00000189079 463 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Gm37987-201ENSMUST00000194999 825 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Gm44083-201ENSMUST00000203114 337 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Gm44727-201ENSMUST00000204225 451 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC2.01□□□□□ -2.09
Col5a1O88207 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC2.01□□□□□ -2.09
Col5a1O88207 Gm19599-201ENSMUST00000218898 358 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC2.01□□□□□ -2.09
Col5a1O88207 AC130829.3-201ENSMUST00000222735 154 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Col5a1O88207 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Col5a1O88207 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Col5a1O88207 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Col5a1O88207 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.01□□□□□ -2.09
Col5a1O88207 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Col5a1O88207 Gm43046-201ENSMUST00000198771 2451 ntBASIC2□□□□□ -2.09
Col5a1O88207 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Col5a1O88207 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
Col5a1O88207 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC2□□□□□ -2.09
Col5a1O88207 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Col5a1O88207 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC2□□□□□ -2.09
Col5a1O88207 Gm42448-201ENSMUST00000197122 2644 ntBASIC2□□□□□ -2.09
Col5a1O88207 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2□□□□□ -2.09
Col5a1O88207 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC2□□□□□ -2.09
Col5a1O88207 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC2□□□□□ -2.09
Col5a1O88207 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC2□□□□□ -2.09
Col5a1O88207 Gm14931-201ENSMUST00000111079 253 ntBASIC2□□□□□ -2.09
Col5a1O88207 Gm12636-201ENSMUST00000117395 624 ntBASIC2□□□□□ -2.09
Col5a1O88207 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC2□□□□□ -2.09
Col5a1O88207 Gm24061-201ENSMUST00000157489 120 ntBASIC2□□□□□ -2.09
Col5a1O88207 Gm24962-201ENSMUST00000157917 109 ntBASIC2□□□□□ -2.09
Col5a1O88207 Gm22891-201ENSMUST00000158641 164 ntBASIC2□□□□□ -2.09
Col5a1O88207 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2□□□□□ -2.09
Col5a1O88207 Gm15900-201ENSMUST00000161584 342 ntBASIC2□□□□□ -2.09
Col5a1O88207 Gm16490-201ENSMUST00000165299 351 ntBASIC2□□□□□ -2.09
Col5a1O88207 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC2□□□□□ -2.09
Col5a1O88207 Gm24080-201ENSMUST00000175178 232 ntBASIC2□□□□□ -2.09
Col5a1O88207 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC2□□□□□ -2.09
Col5a1O88207 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC2□□□□□ -2.09
Col5a1O88207 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC2□□□□□ -2.09
Col5a1O88207 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC2□□□□□ -2.09
Col5a1O88207 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC2□□□□□ -2.09
Col5a1O88207 AC121844.1-201ENSMUST00000218706 137 ntBASIC2□□□□□ -2.09
Col5a1O88207 Gm2544-201ENSMUST00000222702 756 ntBASIC2□□□□□ -2.09
Col5a1O88207 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC2□□□□□ -2.09
Col5a1O88207 Gm26922-201ENSMUST00000082687 72 ntBASIC2□□□□□ -2.09
Col5a1O88207 Gm37407-201ENSMUST00000194793 1316 ntBASIC2□□□□□ -2.09
Col5a1O88207 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC2□□□□□ -2.09
Col5a1O88207 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC1.99□□□□□ -2.09
Col5a1O88207 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Col5a1O88207 Gm37788-201ENSMUST00000193958 2705 ntBASIC1.99□□□□□ -2.09
Col5a1O88207 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.99□□□□□ -2.09
Col5a1O88207 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Col5a1O88207 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Col5a1O88207 Gm16400-201ENSMUST00000116523 1029 ntBASIC1.99□□□□□ -2.09
Col5a1O88207 Gm12814-201ENSMUST00000117091 846 ntBASIC1.99□□□□□ -2.09
Col5a1O88207 Gm14163-201ENSMUST00000117342 217 ntBASIC1.99□□□□□ -2.09
Col5a1O88207 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC1.99□□□□□ -2.09
Col5a1O88207 Gm15878-201ENSMUST00000127561 306 ntBASIC1.99□□□□□ -2.09
Col5a1O88207 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC1.99□□□□□ -2.09
Col5a1O88207 Gm25979-201ENSMUST00000157177 138 ntBASIC1.99□□□□□ -2.09
Col5a1O88207 Gm24076-201ENSMUST00000158179 94 ntBASIC1.99□□□□□ -2.09
Col5a1O88207 Gm26352-201ENSMUST00000158223 125 ntBASIC1.99□□□□□ -2.09
Col5a1O88207 Gm23967-201ENSMUST00000175062 78 ntBASIC1.99□□□□□ -2.09
Col5a1O88207 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Col5a1O88207 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Col5a1O88207 Mir7679-201ENSMUST00000183379 63 ntBASIC1.99□□□□□ -2.09
Col5a1O88207 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC1.99□□□□□ -2.09
Col5a1O88207 Gm37037-201ENSMUST00000194475 424 ntBASIC1.99□□□□□ -2.09
Col5a1O88207 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC1.99□□□□□ -2.09
Col5a1O88207 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC1.99□□□□□ -2.09
Col5a1O88207 AC156795.1-201ENSMUST00000214655 414 ntBASIC1.99□□□□□ -2.09
Col5a1O88207 AC173345.3-201ENSMUST00000221245 1093 ntBASIC1.99□□□□□ -2.09
Col5a1O88207 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Col5a1O88207 AC154506.3-201ENSMUST00000225417 213 ntBASIC1.99□□□□□ -2.09
Col5a1O88207 CT030662.1-201ENSMUST00000227380 232 ntBASIC1.99□□□□□ -2.09
Col5a1O88207 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC1.99□□□□□ -2.09
Col5a1O88207 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Col5a1O88207 Gm24313-201ENSMUST00000082561 133 ntBASIC1.99□□□□□ -2.09
Col5a1O88207 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Col5a1O88207 AC158805.1-201ENSMUST00000218197 2631 ntBASIC1.99□□□□□ -2.09
Col5a1O88207 AC122828.3-201ENSMUST00000223019 3915 ntBASIC1.99□□□□□ -2.09
Col5a1O88207 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
Col5a1O88207 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
Col5a1O88207 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Col5a1O88207 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC1.99□□□□□ -2.09
Col5a1O88207 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Col5a1O88207 Gm14007-201ENSMUST00000118288 210 ntBASIC1.98□□□□□ -2.09
Col5a1O88207 Gm14982-201ENSMUST00000121102 442 ntBASIC1.98□□□□□ -2.09
Col5a1O88207 Defa-ps12-201ENSMUST00000122353 193 ntBASIC1.98□□□□□ -2.09
Col5a1O88207 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC1.98□□□□□ -2.09
Col5a1O88207 Gm27964-201ENSMUST00000185195 62 ntBASIC1.98□□□□□ -2.09
Col5a1O88207 Gm18406-201ENSMUST00000185872 669 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms