Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC1.58□□□□□ -2.16
Cacna1bO55017 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Cacna1bO55017 Gm27544-201ENSMUST00000185069 155 ntBASIC1.58□□□□□ -2.16
Cacna1bO55017 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC1.58□□□□□ -2.16
Cacna1bO55017 Gm42465-201ENSMUST00000197036 492 ntBASIC1.58□□□□□ -2.16
Cacna1bO55017 Mir6962-201ENSMUST00000199512 63 ntBASIC1.58□□□□□ -2.16
Cacna1bO55017 Gm43954-201ENSMUST00000204634 544 ntBASIC1.58□□□□□ -2.16
Cacna1bO55017 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC1.58□□□□□ -2.16
Cacna1bO55017 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC1.58□□□□□ -2.16
Cacna1bO55017 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC1.58□□□□□ -2.16
Cacna1bO55017 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC1.58□□□□□ -2.16
Cacna1bO55017 AC170086.1-201ENSMUST00000225190 497 ntBASIC1.58□□□□□ -2.16
Cacna1bO55017 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC1.58□□□□□ -2.16
Cacna1bO55017 Gm14163-201ENSMUST00000117342 217 ntBASIC1.58□□□□□ -2.16
Cacna1bO55017 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC1.58□□□□□ -2.16
Cacna1bO55017 Gm12294-201ENSMUST00000119723 490 ntBASIC1.58□□□□□ -2.16
Cacna1bO55017 Gm24666-201ENSMUST00000158937 167 ntBASIC1.58□□□□□ -2.16
Cacna1bO55017 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Cacna1bO55017 AC154532.2-201ENSMUST00000228947 598 ntBASIC1.58□□□□□ -2.16
Cacna1bO55017 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Cacna1bO55017 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Cacna1bO55017 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Cacna1bO55017 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Cacna1bO55017 Gm12765-201ENSMUST00000117273 615 ntBASIC1.57□□□□□ -2.16
Cacna1bO55017 Gm14898-201ENSMUST00000120202 645 ntBASIC1.57□□□□□ -2.16
Cacna1bO55017 Mir6393-201ENSMUST00000183709 94 ntBASIC1.57□□□□□ -2.16
Cacna1bO55017 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.57□□□□□ -2.16
Cacna1bO55017 Gm18611-201ENSMUST00000200334 1118 ntBASIC1.57□□□□□ -2.16
Cacna1bO55017 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC1.57□□□□□ -2.16
Cacna1bO55017 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Cacna1bO55017 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Cacna1bO55017 Gm22304-201ENSMUST00000082688 129 ntBASIC1.57□□□□□ -2.16
Cacna1bO55017 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC1.57□□□□□ -2.16
Cacna1bO55017 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.57□□□□□ -2.16
Cacna1bO55017 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Cacna1bO55017 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Cacna1bO55017 Mir6405-201ENSMUST00000184584 124 ntBASIC1.57□□□□□ -2.16
Cacna1bO55017 Gm37219-201ENSMUST00000192036 926 ntBASIC1.57□□□□□ -2.16
Cacna1bO55017 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Cacna1bO55017 Gm6012-201ENSMUST00000210821 730 ntBASIC1.57□□□□□ -2.16
Cacna1bO55017 AC153801.1-201ENSMUST00000217904 947 ntBASIC1.57□□□□□ -2.16
Cacna1bO55017 AC241593.1-201ENSMUST00000224768 397 ntBASIC1.57□□□□□ -2.16
Cacna1bO55017 AC109172.1-201ENSMUST00000227503 187 ntBASIC1.57□□□□□ -2.16
Cacna1bO55017 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC1.57□□□□□ -2.16
Cacna1bO55017 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Cacna1bO55017 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC1.57□□□□□ -2.16
Cacna1bO55017 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Cacna1bO55017 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
Cacna1bO55017 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
Cacna1bO55017 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC1.56□□□□□ -2.16
Cacna1bO55017 Gm14986-201ENSMUST00000121262 1002 ntBASIC1.56□□□□□ -2.16
Cacna1bO55017 Mir3098-201ENSMUST00000175416 87 ntBASIC1.56□□□□□ -2.16
Cacna1bO55017 Gm18406-201ENSMUST00000185872 669 ntBASIC1.56□□□□□ -2.16
Cacna1bO55017 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC1.56□□□□□ -2.16
Cacna1bO55017 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC1.56□□□□□ -2.16
Cacna1bO55017 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC1.56□□□□□ -2.16
Cacna1bO55017 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC1.56□□□□□ -2.16
Cacna1bO55017 Gm44555-201ENSMUST00000209008 148 ntBASIC1.56□□□□□ -2.16
Cacna1bO55017 AC160970.1-201ENSMUST00000219311 475 ntBASIC1.56□□□□□ -2.16
Cacna1bO55017 Gm26176-201ENSMUST00000083795 105 ntBASIC1.56□□□□□ -2.16
Cacna1bO55017 Gm24917-201ENSMUST00000083935 104 ntBASIC1.56□□□□□ -2.16
Cacna1bO55017 Gm24984-201ENSMUST00000104454 133 ntBASIC1.56□□□□□ -2.16
Cacna1bO55017 Gm14623-201ENSMUST00000121398 603 ntBASIC1.56□□□□□ -2.16
Cacna1bO55017 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.56□□□□□ -2.16
Cacna1bO55017 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
Cacna1bO55017 Gm17161-201ENSMUST00000169187 524 ntBASIC1.56□□□□□ -2.16
Cacna1bO55017 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC1.56□□□□□ -2.16
Cacna1bO55017 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC1.56□□□□□ -2.16
Cacna1bO55017 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Cacna1bO55017 Gm20679-201ENSMUST00000177285 1402 ntBASIC1.56□□□□□ -2.16
Cacna1bO55017 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Cacna1bO55017 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Cacna1bO55017 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Cacna1bO55017 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
Cacna1bO55017 Gm7209-201ENSMUST00000122339 333 ntBASIC1.55□□□□□ -2.16
Cacna1bO55017 Gm23083-201ENSMUST00000157851 116 ntBASIC1.55□□□□□ -2.16
Cacna1bO55017 Gm9613-201ENSMUST00000171662 196 ntBASIC1.55□□□□□ -2.16
Cacna1bO55017 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC1.55□□□□□ -2.16
Cacna1bO55017 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC1.55□□□□□ -2.16
Cacna1bO55017 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC1.55□□□□□ -2.16
Cacna1bO55017 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Cacna1bO55017 AC153967.1-201ENSMUST00000219333 3190 ntBASIC1.55□□□□□ -2.16
Cacna1bO55017 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.55□□□□□ -2.16
Cacna1bO55017 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Cacna1bO55017 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
Cacna1bO55017 Gm12880-201ENSMUST00000120652 494 ntBASIC1.55□□□□□ -2.16
Cacna1bO55017 Gm15116-201ENSMUST00000122248 663 ntBASIC1.55□□□□□ -2.16
Cacna1bO55017 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC1.55□□□□□ -2.16
Cacna1bO55017 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Cacna1bO55017 Gm22340-201ENSMUST00000157717 114 ntBASIC1.55□□□□□ -2.16
Cacna1bO55017 Mir1927-201ENSMUST00000158579 109 ntBASIC1.55□□□□□ -2.16
Cacna1bO55017 Gm22853-201ENSMUST00000174974 131 ntBASIC1.55□□□□□ -2.16
Cacna1bO55017 Gm24154-201ENSMUST00000175261 130 ntBASIC1.55□□□□□ -2.16
Cacna1bO55017 Gm28155-201ENSMUST00000191066 151 ntBASIC1.55□□□□□ -2.16
Cacna1bO55017 AC158392.1-201ENSMUST00000223720 1069 ntBASIC1.55□□□□□ -2.16
Cacna1bO55017 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.55□□□□□ -2.16
Cacna1bO55017 Gm18354-201ENSMUST00000173515 1068 ntBASIC1.54□□□□□ -2.16
Cacna1bO55017 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC1.54□□□□□ -2.16
Cacna1bO55017 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC1.54□□□□□ -2.16
Cacna1bO55017 Gm11392-201ENSMUST00000181419 710 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms