Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm25203-201ENSMUST00000082842 215 ntBASIC3.94□□□□□ -1.78
Pcdh1F7BJK1 Gm37887-201ENSMUST00000192752 2716 ntBASIC3.94□□□□□ -1.78
Pcdh1F7BJK1 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Pcdh1F7BJK1 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Pcdh1F7BJK1 Gm43705-201ENSMUST00000195958 3717 ntBASIC3.94□□□□□ -1.78
Pcdh1F7BJK1 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Pcdh1F7BJK1 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Pcdh1F7BJK1 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
Pcdh1F7BJK1 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Pcdh1F7BJK1 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Pcdh1F7BJK1 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Pcdh1F7BJK1 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Pcdh1F7BJK1 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC3.93□□□□□ -1.78
Pcdh1F7BJK1 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Pcdh1F7BJK1 Mir687-201ENSMUST00000102166 89 ntBASIC3.93□□□□□ -1.78
Pcdh1F7BJK1 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC3.93□□□□□ -1.78
Pcdh1F7BJK1 Gm25341-201ENSMUST00000157461 268 ntBASIC3.93□□□□□ -1.78
Pcdh1F7BJK1 Gm24507-201ENSMUST00000157683 134 ntBASIC3.93□□□□□ -1.78
Pcdh1F7BJK1 Gm26310-201ENSMUST00000157766 117 ntBASIC3.93□□□□□ -1.78
Pcdh1F7BJK1 Mir5129-201ENSMUST00000174938 78 ntBASIC3.93□□□□□ -1.78
Pcdh1F7BJK1 Mir5098-201ENSMUST00000175320 82 ntBASIC3.93□□□□□ -1.78
Pcdh1F7BJK1 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC3.93□□□□□ -1.78
Pcdh1F7BJK1 Mir7028-201ENSMUST00000185016 64 ntBASIC3.93□□□□□ -1.78
Pcdh1F7BJK1 Gm2950-201ENSMUST00000185530 520 ntBASIC3.93□□□□□ -1.78
Pcdh1F7BJK1 Gm28976-201ENSMUST00000188070 144 ntBASIC3.93□□□□□ -1.78
Pcdh1F7BJK1 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC3.93□□□□□ -1.78
Pcdh1F7BJK1 Gm38069-201ENSMUST00000195360 2144 ntBASIC3.93□□□□□ -1.78
Pcdh1F7BJK1 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC3.93□□□□□ -1.78
Pcdh1F7BJK1 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC3.93□□□□□ -1.78
Pcdh1F7BJK1 AC158523.1-201ENSMUST00000221398 328 ntBASIC3.93□□□□□ -1.78
Pcdh1F7BJK1 AC167420.1-201ENSMUST00000222999 2121 ntBASIC3.93□□□□□ -1.78
Pcdh1F7BJK1 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Pcdh1F7BJK1 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC3.93□□□□□ -1.78
Pcdh1F7BJK1 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Pcdh1F7BJK1 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC3.93□□□□□ -1.78
Pcdh1F7BJK1 Gm43320-201ENSMUST00000196047 2916 ntBASIC3.93□□□□□ -1.78
Pcdh1F7BJK1 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Pcdh1F7BJK1 AC115047.2-201ENSMUST00000214421 1848 ntBASIC3.93□□□□□ -1.78
Pcdh1F7BJK1 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Pcdh1F7BJK1 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Pcdh1F7BJK1 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Pcdh1F7BJK1 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Pcdh1F7BJK1 Gm15102-201ENSMUST00000118740 1502 ntBASIC3.92□□□□□ -1.78
Pcdh1F7BJK1 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Pcdh1F7BJK1 Gm22020-201ENSMUST00000104358 136 ntBASIC3.92□□□□□ -1.78
Pcdh1F7BJK1 Gm24160-201ENSMUST00000104594 126 ntBASIC3.92□□□□□ -1.78
Pcdh1F7BJK1 Gm13329-201ENSMUST00000117063 265 ntBASIC3.92□□□□□ -1.78
Pcdh1F7BJK1 Gm11432-201ENSMUST00000117334 231 ntBASIC3.92□□□□□ -1.78
Pcdh1F7BJK1 Gm6274-201ENSMUST00000118173 797 ntBASIC3.92□□□□□ -1.78
Pcdh1F7BJK1 Gm15037-201ENSMUST00000120358 259 ntBASIC3.92□□□□□ -1.78
Pcdh1F7BJK1 Gm13967-201ENSMUST00000120404 380 ntBASIC3.92□□□□□ -1.78
Pcdh1F7BJK1 Gm22814-201ENSMUST00000157452 104 ntBASIC3.92□□□□□ -1.78
Pcdh1F7BJK1 Gm25333-201ENSMUST00000158035 246 ntBASIC3.92□□□□□ -1.78
Pcdh1F7BJK1 Gm24217-201ENSMUST00000158260 133 ntBASIC3.92□□□□□ -1.78
Pcdh1F7BJK1 Mir7022-201ENSMUST00000183749 61 ntBASIC3.92□□□□□ -1.78
Pcdh1F7BJK1 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC3.92□□□□□ -1.78
Pcdh1F7BJK1 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Pcdh1F7BJK1 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Pcdh1F7BJK1 Gm38060-201ENSMUST00000194822 464 ntBASIC3.92□□□□□ -1.78
Pcdh1F7BJK1 Ighv1-32-201ENSMUST00000195149 351 ntBASIC3.92□□□□□ -1.78
Pcdh1F7BJK1 Gm17775-201ENSMUST00000198542 258 ntBASIC3.92□□□□□ -1.78
Pcdh1F7BJK1 AC125374.2-201ENSMUST00000214278 162 ntBASIC3.92□□□□□ -1.78
Pcdh1F7BJK1 Supt4b-201ENSMUST00000214434 351 ntBASIC3.92□□□□□ -1.78
Pcdh1F7BJK1 Gm16419-201ENSMUST00000221057 625 ntBASIC3.92□□□□□ -1.78
Pcdh1F7BJK1 AC158982.2-201ENSMUST00000226283 184 ntBASIC3.92□□□□□ -1.78
Pcdh1F7BJK1 Gm10088-201ENSMUST00000074116 423 ntBASIC3.92□□□□□ -1.78
Pcdh1F7BJK1 Gm26497-201ENSMUST00000083146 107 ntBASIC3.92□□□□□ -1.78
Pcdh1F7BJK1 Gm8074-201ENSMUST00000095071 252 ntBASIC3.92□□□□□ -1.78
Pcdh1F7BJK1 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
Pcdh1F7BJK1 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Pcdh1F7BJK1 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Pcdh1F7BJK1 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Pcdh1F7BJK1 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
Pcdh1F7BJK1 Gm3584-201ENSMUST00000173822 2565 ntBASIC3.92□□□□□ -1.78
Pcdh1F7BJK1 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Pcdh1F7BJK1 Gm42447-201ENSMUST00000200102 2903 ntBASIC3.91□□□□□ -1.78
Pcdh1F7BJK1 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Pcdh1F7BJK1 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Pcdh1F7BJK1 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Pcdh1F7BJK1 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.91□□□□□ -1.78
Pcdh1F7BJK1 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC3.91□□□□□ -1.78
Pcdh1F7BJK1 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
Pcdh1F7BJK1 Gm23879-201ENSMUST00000116874 126 ntBASIC3.91□□□□□ -1.78
Pcdh1F7BJK1 Gm12125-201ENSMUST00000117261 736 ntBASIC3.91□□□□□ -1.78
Pcdh1F7BJK1 Gm12782-201ENSMUST00000117519 727 ntBASIC3.91□□□□□ -1.78
Pcdh1F7BJK1 Gm11698-201ENSMUST00000117948 455 ntBASIC3.91□□□□□ -1.78
Pcdh1F7BJK1 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC3.91□□□□□ -1.78
Pcdh1F7BJK1 Gm15905-201ENSMUST00000137042 298 ntBASIC3.91□□□□□ -1.78
Pcdh1F7BJK1 Zakit-201ENSMUST00000157677 308 ntBASIC3.91□□□□□ -1.78
Pcdh1F7BJK1 Gm24188-201ENSMUST00000157980 108 ntBASIC3.91□□□□□ -1.78
Pcdh1F7BJK1 Gm22389-201ENSMUST00000158193 301 ntBASIC3.91□□□□□ -1.78
Pcdh1F7BJK1 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Pcdh1F7BJK1 Gm28920-201ENSMUST00000189957 699 ntBASIC3.91□□□□□ -1.78
Pcdh1F7BJK1 Gm28924-201ENSMUST00000190012 241 ntBASIC3.91□□□□□ -1.78
Pcdh1F7BJK1 Gm29330-201ENSMUST00000190032 699 ntBASIC3.91□□□□□ -1.78
Pcdh1F7BJK1 Gm45007-201ENSMUST00000206237 366 ntBASIC3.91□□□□□ -1.78
Pcdh1F7BJK1 Gm45236-201ENSMUST00000208632 229 ntBASIC3.91□□□□□ -1.78
Pcdh1F7BJK1 AC164297.3-201ENSMUST00000224238 94 ntBASIC3.91□□□□□ -1.78
Pcdh1F7BJK1 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Pcdh1F7BJK1 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 94.5 ms