Protein–RNA interactions for Protein: A3KGF9

Ccdc9b, Coiled-coil domain-containing protein 9B, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9bA3KGF9 Gm26490-201ENSMUST00000157879 140 ntBASIC4.36□□□□□ -1.71
Ccdc9bA3KGF9 Gm16318-201ENSMUST00000162402 601 ntBASIC4.36□□□□□ -1.71
Ccdc9bA3KGF9 Gm22177-201ENSMUST00000175002 158 ntBASIC4.36□□□□□ -1.71
Ccdc9bA3KGF9 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC4.36□□□□□ -1.71
Ccdc9bA3KGF9 Gm23355-201ENSMUST00000177614 107 ntBASIC4.36□□□□□ -1.71
Ccdc9bA3KGF9 Gm23148-201ENSMUST00000180367 107 ntBASIC4.36□□□□□ -1.71
Ccdc9bA3KGF9 Gm7909-201ENSMUST00000182688 614 ntBASIC4.36□□□□□ -1.71
Ccdc9bA3KGF9 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC4.36□□□□□ -1.71
Ccdc9bA3KGF9 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Ccdc9bA3KGF9 Gm28849-201ENSMUST00000188127 174 ntBASIC4.36□□□□□ -1.71
Ccdc9bA3KGF9 Gm28330-201ENSMUST00000190353 171 ntBASIC4.36□□□□□ -1.71
Ccdc9bA3KGF9 Gm37713-201ENSMUST00000191746 198 ntBASIC4.36□□□□□ -1.71
Ccdc9bA3KGF9 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.36□□□□□ -1.71
Ccdc9bA3KGF9 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Ccdc9bA3KGF9 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Ccdc9bA3KGF9 Mir504-201ENSMUST00000093602 79 ntBASIC4.36□□□□□ -1.71
Ccdc9bA3KGF9 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Ccdc9bA3KGF9 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Ccdc9bA3KGF9 Gm38020-201ENSMUST00000193066 4676 ntBASIC4.36□□□□□ -1.71
Ccdc9bA3KGF9 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Ccdc9bA3KGF9 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Ccdc9bA3KGF9 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
Ccdc9bA3KGF9 AC162938.2-205ENSMUST00000217551 2828 ntBASIC4.36□□□□□ -1.71
Ccdc9bA3KGF9 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Ccdc9bA3KGF9 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
Ccdc9bA3KGF9 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
Ccdc9bA3KGF9 Gm24423-201ENSMUST00000101982 106 ntBASIC4.35□□□□□ -1.71
Ccdc9bA3KGF9 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC4.35□□□□□ -1.71
Ccdc9bA3KGF9 Gm25726-201ENSMUST00000104529 129 ntBASIC4.35□□□□□ -1.71
Ccdc9bA3KGF9 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC4.35□□□□□ -1.71
Ccdc9bA3KGF9 Gm15357-201ENSMUST00000119160 285 ntBASIC4.35□□□□□ -1.71
Ccdc9bA3KGF9 Gm11572-201ENSMUST00000119164 120 ntBASIC4.35□□□□□ -1.71
Ccdc9bA3KGF9 Gm12704-201ENSMUST00000119789 464 ntBASIC4.35□□□□□ -1.71
Ccdc9bA3KGF9 Gm16354-201ENSMUST00000155376 150 ntBASIC4.35□□□□□ -1.71
Ccdc9bA3KGF9 Gm22561-201ENSMUST00000157331 84 ntBASIC4.35□□□□□ -1.71
Ccdc9bA3KGF9 Gm26186-201ENSMUST00000157689 125 ntBASIC4.35□□□□□ -1.71
Ccdc9bA3KGF9 Gm25162-201ENSMUST00000158906 159 ntBASIC4.35□□□□□ -1.71
Ccdc9bA3KGF9 Gm17528-201ENSMUST00000171026 239 ntBASIC4.35□□□□□ -1.71
Ccdc9bA3KGF9 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC4.35□□□□□ -1.71
Ccdc9bA3KGF9 Gm19427-201ENSMUST00000183619 208 ntBASIC4.35□□□□□ -1.71
Ccdc9bA3KGF9 Gm27690-201ENSMUST00000184596 126 ntBASIC4.35□□□□□ -1.71
Ccdc9bA3KGF9 Gm44376-201ENSMUST00000197570 128 ntBASIC4.35□□□□□ -1.71
Ccdc9bA3KGF9 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC4.35□□□□□ -1.71
Ccdc9bA3KGF9 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC4.35□□□□□ -1.71
Ccdc9bA3KGF9 Gm45380-201ENSMUST00000210465 315 ntBASIC4.35□□□□□ -1.71
Ccdc9bA3KGF9 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC4.35□□□□□ -1.71
Ccdc9bA3KGF9 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Ccdc9bA3KGF9 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC4.35□□□□□ -1.71
Ccdc9bA3KGF9 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Ccdc9bA3KGF9 Gm42659-201ENSMUST00000196955 1754 ntBASIC4.35□□□□□ -1.71
Ccdc9bA3KGF9 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Ccdc9bA3KGF9 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Ccdc9bA3KGF9 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Ccdc9bA3KGF9 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Ccdc9bA3KGF9 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Ccdc9bA3KGF9 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Ccdc9bA3KGF9 Mir541-201ENSMUST00000102097 90 ntBASIC4.34□□□□□ -1.71
Ccdc9bA3KGF9 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC4.34□□□□□ -1.71
Ccdc9bA3KGF9 Gm8129-201ENSMUST00000118230 213 ntBASIC4.34□□□□□ -1.71
Ccdc9bA3KGF9 Gm15012-201ENSMUST00000119176 106 ntBASIC4.34□□□□□ -1.71
Ccdc9bA3KGF9 Gm14861-201ENSMUST00000119451 455 ntBASIC4.34□□□□□ -1.71
Ccdc9bA3KGF9 Gm11742-201ENSMUST00000119903 233 ntBASIC4.34□□□□□ -1.71
Ccdc9bA3KGF9 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Ccdc9bA3KGF9 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC4.34□□□□□ -1.71
Ccdc9bA3KGF9 Gm26034-201ENSMUST00000158154 116 ntBASIC4.34□□□□□ -1.71
Ccdc9bA3KGF9 Gm24675-201ENSMUST00000158757 259 ntBASIC4.34□□□□□ -1.71
Ccdc9bA3KGF9 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC4.34□□□□□ -1.71
Ccdc9bA3KGF9 Mir6418-201ENSMUST00000185075 115 ntBASIC4.34□□□□□ -1.71
Ccdc9bA3KGF9 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC4.34□□□□□ -1.71
Ccdc9bA3KGF9 Gm2497-201ENSMUST00000189539 601 ntBASIC4.34□□□□□ -1.71
Ccdc9bA3KGF9 Gm37836-201ENSMUST00000195875 175 ntBASIC4.34□□□□□ -1.71
Ccdc9bA3KGF9 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC4.34□□□□□ -1.71
Ccdc9bA3KGF9 AC241593.2-201ENSMUST00000225099 510 ntBASIC4.34□□□□□ -1.71
Ccdc9bA3KGF9 n-R5s170-201ENSMUST00000083726 113 ntBASIC4.34□□□□□ -1.71
Ccdc9bA3KGF9 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 Gm36944-201ENSMUST00000192257 2759 ntBASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 AC121598.3-201ENSMUST00000227179 1643 ntBASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 Gm15058-201ENSMUST00000117689 458 ntBASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 Gm12820-201ENSMUST00000119233 342 ntBASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 Gm14551-201ENSMUST00000120802 256 ntBASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 Gm25103-201ENSMUST00000122671 318 ntBASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 Gm22145-201ENSMUST00000157396 148 ntBASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 Gm24720-201ENSMUST00000157518 166 ntBASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 Gm23350-201ENSMUST00000158429 103 ntBASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 Gm17100-201ENSMUST00000168963 272 ntBASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 Gm22395-201ENSMUST00000177427 96 ntBASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 Mir3620-201ENSMUST00000184710 61 ntBASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 Gm28957-201ENSMUST00000190174 373 ntBASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 Gm8599-201ENSMUST00000193033 457 ntBASIC4.33□□□□□ -1.72
Ccdc9bA3KGF9 Gm4045-201ENSMUST00000204076 310 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms