Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Prpf40aQ9R1C7 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Prpf40aQ9R1C7 Gm37733-201ENSMUST00000195478 2962 ntBASIC5.14□□□□□ -1.59
Prpf40aQ9R1C7 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Prpf40aQ9R1C7 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Prpf40aQ9R1C7 AC160130.1-201ENSMUST00000220734 2735 ntBASIC5.14□□□□□ -1.59
Prpf40aQ9R1C7 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
Prpf40aQ9R1C7 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
Prpf40aQ9R1C7 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Prpf40aQ9R1C7 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC5.14□□□□□ -1.59
Prpf40aQ9R1C7 Gm14838-201ENSMUST00000118913 248 ntBASIC5.14□□□□□ -1.59
Prpf40aQ9R1C7 Gm11456-201ENSMUST00000121070 256 ntBASIC5.14□□□□□ -1.59
Prpf40aQ9R1C7 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC5.14□□□□□ -1.59
Prpf40aQ9R1C7 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC5.14□□□□□ -1.59
Prpf40aQ9R1C7 Gm26045-201ENSMUST00000157862 97 ntBASIC5.14□□□□□ -1.59
Prpf40aQ9R1C7 Gm24885-201ENSMUST00000158783 270 ntBASIC5.14□□□□□ -1.59
Prpf40aQ9R1C7 Nron-204ENSMUST00000158971 370 ntBASIC5.14□□□□□ -1.59
Prpf40aQ9R1C7 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Prpf40aQ9R1C7 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Prpf40aQ9R1C7 Gm17528-201ENSMUST00000171026 239 ntBASIC5.14□□□□□ -1.59
Prpf40aQ9R1C7 Gm26828-201ENSMUST00000180640 172 ntBASIC5.14□□□□□ -1.59
Prpf40aQ9R1C7 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC5.14□□□□□ -1.59
Prpf40aQ9R1C7 Gm29484-201ENSMUST00000186067 324 ntBASIC5.14□□□□□ -1.59
Prpf40aQ9R1C7 Gm34091-201ENSMUST00000200875 604 ntBASIC5.14□□□□□ -1.59
Prpf40aQ9R1C7 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Prpf40aQ9R1C7 Gm17811-201ENSMUST00000206193 387 ntBASIC5.14□□□□□ -1.59
Prpf40aQ9R1C7 Gm45860-201ENSMUST00000212700 334 ntBASIC5.14□□□□□ -1.59
Prpf40aQ9R1C7 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC5.14□□□□□ -1.59
Prpf40aQ9R1C7 AC145736.2-201ENSMUST00000216305 365 ntBASIC5.14□□□□□ -1.59
Prpf40aQ9R1C7 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC5.14□□□□□ -1.59
Prpf40aQ9R1C7 Gm23300-201ENSMUST00000082712 125 ntBASIC5.14□□□□□ -1.59
Prpf40aQ9R1C7 n-R5s152-201ENSMUST00000093641 119 ntBASIC5.14□□□□□ -1.59
Prpf40aQ9R1C7 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Prpf40aQ9R1C7 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Prpf40aQ9R1C7 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC5.14□□□□□ -1.59
Prpf40aQ9R1C7 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Prpf40aQ9R1C7 AC131743.1-201ENSMUST00000222138 4024 ntBASIC5.14□□□□□ -1.59
Prpf40aQ9R1C7 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Prpf40aQ9R1C7 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Prpf40aQ9R1C7 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Prpf40aQ9R1C7 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Prpf40aQ9R1C7 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Prpf40aQ9R1C7 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Prpf40aQ9R1C7 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Prpf40aQ9R1C7 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC5.13□□□□□ -1.59
Prpf40aQ9R1C7 Gm14846-201ENSMUST00000121868 216 ntBASIC5.13□□□□□ -1.59
Prpf40aQ9R1C7 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Prpf40aQ9R1C7 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC5.13□□□□□ -1.59
Prpf40aQ9R1C7 Gm24188-201ENSMUST00000157980 108 ntBASIC5.13□□□□□ -1.59
Prpf40aQ9R1C7 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC5.13□□□□□ -1.59
Prpf40aQ9R1C7 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC5.13□□□□□ -1.59
Prpf40aQ9R1C7 Gm23355-201ENSMUST00000177614 107 ntBASIC5.13□□□□□ -1.59
Prpf40aQ9R1C7 Gm23148-201ENSMUST00000180367 107 ntBASIC5.13□□□□□ -1.59
Prpf40aQ9R1C7 Gm37713-201ENSMUST00000191746 198 ntBASIC5.13□□□□□ -1.59
Prpf40aQ9R1C7 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC5.13□□□□□ -1.59
Prpf40aQ9R1C7 Gm45236-201ENSMUST00000208632 229 ntBASIC5.13□□□□□ -1.59
Prpf40aQ9R1C7 Gm45380-201ENSMUST00000210465 315 ntBASIC5.13□□□□□ -1.59
Prpf40aQ9R1C7 AC164567.4-201ENSMUST00000219708 483 ntBASIC5.13□□□□□ -1.59
Prpf40aQ9R1C7 AC124549.1-201ENSMUST00000225912 333 ntBASIC5.13□□□□□ -1.59
Prpf40aQ9R1C7 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC5.13□□□□□ -1.59
Prpf40aQ9R1C7 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Prpf40aQ9R1C7 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC5.13□□□□□ -1.59
Prpf40aQ9R1C7 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Prpf40aQ9R1C7 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Prpf40aQ9R1C7 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Prpf40aQ9R1C7 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Prpf40aQ9R1C7 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Prpf40aQ9R1C7 Gm43329-201ENSMUST00000200120 3232 ntBASIC5.12□□□□□ -1.59
Prpf40aQ9R1C7 Gm36298-201ENSMUST00000223394 1732 ntBASIC5.12□□□□□ -1.59
Prpf40aQ9R1C7 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Prpf40aQ9R1C7 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Prpf40aQ9R1C7 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Prpf40aQ9R1C7 Mir541-201ENSMUST00000102097 90 ntBASIC5.12□□□□□ -1.59
Prpf40aQ9R1C7 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Prpf40aQ9R1C7 Gm23879-201ENSMUST00000116874 126 ntBASIC5.12□□□□□ -1.59
Prpf40aQ9R1C7 Gm11572-201ENSMUST00000119164 120 ntBASIC5.12□□□□□ -1.59
Prpf40aQ9R1C7 Gm26186-201ENSMUST00000157689 125 ntBASIC5.12□□□□□ -1.59
Prpf40aQ9R1C7 Gm24217-201ENSMUST00000158260 133 ntBASIC5.12□□□□□ -1.59
Prpf40aQ9R1C7 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC5.12□□□□□ -1.59
Prpf40aQ9R1C7 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC5.12□□□□□ -1.59
Prpf40aQ9R1C7 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC5.12□□□□□ -1.59
Prpf40aQ9R1C7 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Prpf40aQ9R1C7 Gm3086-202ENSMUST00000221248 310 ntBASIC5.12□□□□□ -1.59
Prpf40aQ9R1C7 AC131178.1-201ENSMUST00000228649 492 ntBASIC5.12□□□□□ -1.59
Prpf40aQ9R1C7 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Prpf40aQ9R1C7 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC5.12□□□□□ -1.59
Prpf40aQ9R1C7 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Prpf40aQ9R1C7 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Prpf40aQ9R1C7 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Prpf40aQ9R1C7 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Prpf40aQ9R1C7 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Prpf40aQ9R1C7 Gm17131-201ENSMUST00000164420 3846 ntBASIC5.11□□□□□ -1.59
Prpf40aQ9R1C7 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Prpf40aQ9R1C7 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
Prpf40aQ9R1C7 Gm24423-201ENSMUST00000101982 106 ntBASIC5.11□□□□□ -1.59
Prpf40aQ9R1C7 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
Prpf40aQ9R1C7 Gm22020-201ENSMUST00000104358 136 ntBASIC5.11□□□□□ -1.59
Prpf40aQ9R1C7 Gm22899-201ENSMUST00000104540 131 ntBASIC5.11□□□□□ -1.59
Prpf40aQ9R1C7 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC5.11□□□□□ -1.59
Prpf40aQ9R1C7 Gm15058-201ENSMUST00000117689 458 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms