Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm2389-201ENSMUST00000160487 189 ntBASIC4.5□□□□□ -1.69
Trim39Q9ESN2 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.5□□□□□ -1.69
Trim39Q9ESN2 Mir3110-201ENSMUST00000175053 80 ntBASIC4.5□□□□□ -1.69
Trim39Q9ESN2 Gm27849-201ENSMUST00000183673 125 ntBASIC4.5□□□□□ -1.69
Trim39Q9ESN2 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC4.5□□□□□ -1.69
Trim39Q9ESN2 Gm2497-201ENSMUST00000189539 601 ntBASIC4.5□□□□□ -1.69
Trim39Q9ESN2 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC4.5□□□□□ -1.69
Trim39Q9ESN2 Gm43304-201ENSMUST00000196803 326 ntBASIC4.5□□□□□ -1.69
Trim39Q9ESN2 Gm44376-201ENSMUST00000197570 128 ntBASIC4.5□□□□□ -1.69
Trim39Q9ESN2 Gm44010-201ENSMUST00000204432 331 ntBASIC4.5□□□□□ -1.69
Trim39Q9ESN2 Gm45660-201ENSMUST00000210267 151 ntBASIC4.5□□□□□ -1.69
Trim39Q9ESN2 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC4.5□□□□□ -1.69
Trim39Q9ESN2 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Trim39Q9ESN2 AC101945.1-201ENSMUST00000226734 466 ntBASIC4.5□□□□□ -1.69
Trim39Q9ESN2 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Trim39Q9ESN2 Gm26457-201ENSMUST00000082678 78 ntBASIC4.5□□□□□ -1.69
Trim39Q9ESN2 Mir188-201ENSMUST00000083464 68 ntBASIC4.5□□□□□ -1.69
Trim39Q9ESN2 Mir337-201ENSMUST00000083592 97 ntBASIC4.5□□□□□ -1.69
Trim39Q9ESN2 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.5□□□□□ -1.69
Trim39Q9ESN2 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
Trim39Q9ESN2 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.5□□□□□ -1.69
Trim39Q9ESN2 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Trim39Q9ESN2 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Trim39Q9ESN2 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
Trim39Q9ESN2 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Trim39Q9ESN2 Gm3584-201ENSMUST00000173822 2565 ntBASIC4.5□□□□□ -1.69
Trim39Q9ESN2 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
Trim39Q9ESN2 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Trim39Q9ESN2 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Gm25538-201ENSMUST00000101943 107 ntBASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Gm14537-201ENSMUST00000117464 599 ntBASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Gm24594-201ENSMUST00000122502 99 ntBASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Gm23184-201ENSMUST00000122594 131 ntBASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Gm25824-201ENSMUST00000157092 121 ntBASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Gm25392-201ENSMUST00000157335 297 ntBASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Gm25906-201ENSMUST00000158489 126 ntBASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Gm37878-201ENSMUST00000192108 387 ntBASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Gm36259-201ENSMUST00000197340 392 ntBASIC4.49□□□□□ -1.69
Trim39Q9ESN2 AL645522.1-201ENSMUST00000197692 104 ntBASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Igkv4-56-201ENSMUST00000198436 349 ntBASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Trim39Q9ESN2 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Gm44583-201ENSMUST00000207478 281 ntBASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Gm3816-201ENSMUST00000209803 433 ntBASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Gm6842-201ENSMUST00000211361 390 ntBASIC4.49□□□□□ -1.69
Trim39Q9ESN2 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Gm19256-201ENSMUST00000218550 231 ntBASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Gm29774-201ENSMUST00000219270 436 ntBASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC4.49□□□□□ -1.69
Trim39Q9ESN2 AC154276.2-201ENSMUST00000227707 309 ntBASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Gm26454-201ENSMUST00000082682 107 ntBASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Gm23514-201ENSMUST00000082827 130 ntBASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Gm22741-201ENSMUST00000083438 165 ntBASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
Trim39Q9ESN2 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Trim39Q9ESN2 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC4.48□□□□□ -1.69
Trim39Q9ESN2 Gm38260-201ENSMUST00000193573 3995 ntBASIC4.48□□□□□ -1.69
Trim39Q9ESN2 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Trim39Q9ESN2 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC4.48□□□□□ -1.69
Trim39Q9ESN2 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Trim39Q9ESN2 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.48□□□□□ -1.69
Trim39Q9ESN2 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC4.48□□□□□ -1.69
Trim39Q9ESN2 Gm25919-201ENSMUST00000104271 132 ntBASIC4.48□□□□□ -1.69
Trim39Q9ESN2 Mir1188-201ENSMUST00000116756 120 ntBASIC4.48□□□□□ -1.69
Trim39Q9ESN2 Gm13714-201ENSMUST00000117313 221 ntBASIC4.48□□□□□ -1.69
Trim39Q9ESN2 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC4.48□□□□□ -1.69
Trim39Q9ESN2 Gm5123-201ENSMUST00000121905 837 ntBASIC4.48□□□□□ -1.69
Trim39Q9ESN2 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC4.48□□□□□ -1.69
Trim39Q9ESN2 Gm5755-201ENSMUST00000152394 837 ntBASIC4.48□□□□□ -1.69
Trim39Q9ESN2 Gm24944-201ENSMUST00000158330 128 ntBASIC4.48□□□□□ -1.69
Trim39Q9ESN2 Gm23415-201ENSMUST00000175519 83 ntBASIC4.48□□□□□ -1.69
Trim39Q9ESN2 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
Trim39Q9ESN2 Mir8106-201ENSMUST00000184520 139 ntBASIC4.48□□□□□ -1.69
Trim39Q9ESN2 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Trim39Q9ESN2 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Trim39Q9ESN2 Gm42647-201ENSMUST00000195939 459 ntBASIC4.48□□□□□ -1.69
Trim39Q9ESN2 Igkv9-128-201ENSMUST00000196602 353 ntBASIC4.48□□□□□ -1.69
Trim39Q9ESN2 Gm43408-201ENSMUST00000198263 440 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms