Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm22508-201ENSMUST00000082772 110 ntBASIC3.37□□□□□ -1.87
Vps28Q9D1C8 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Vps28Q9D1C8 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
Vps28Q9D1C8 Gm23741-201ENSMUST00000097237 171 ntBASIC3.37□□□□□ -1.87
Vps28Q9D1C8 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Vps28Q9D1C8 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.37□□□□□ -1.87
Vps28Q9D1C8 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Vps28Q9D1C8 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Vps28Q9D1C8 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Vps28Q9D1C8 Gm15733-201ENSMUST00000132957 242 ntBASIC3.36□□□□□ -1.87
Vps28Q9D1C8 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC3.36□□□□□ -1.87
Vps28Q9D1C8 Gm24959-201ENSMUST00000157924 146 ntBASIC3.36□□□□□ -1.87
Vps28Q9D1C8 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Vps28Q9D1C8 Gm8207-201ENSMUST00000171204 502 ntBASIC3.36□□□□□ -1.87
Vps28Q9D1C8 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Vps28Q9D1C8 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC3.36□□□□□ -1.87
Vps28Q9D1C8 CT010506.2-201ENSMUST00000225618 183 ntBASIC3.36□□□□□ -1.87
Vps28Q9D1C8 CT025525.2-201ENSMUST00000227743 423 ntBASIC3.36□□□□□ -1.87
Vps28Q9D1C8 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Vps28Q9D1C8 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Vps28Q9D1C8 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Vps28Q9D1C8 Gm22974-201ENSMUST00000083301 103 ntBASIC3.36□□□□□ -1.87
Vps28Q9D1C8 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Vps28Q9D1C8 Gm37999-201ENSMUST00000195178 1809 ntBASIC3.35□□□□□ -1.87
Vps28Q9D1C8 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
Vps28Q9D1C8 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC3.35□□□□□ -1.87
Vps28Q9D1C8 Gm15223-201ENSMUST00000120989 826 ntBASIC3.35□□□□□ -1.87
Vps28Q9D1C8 Gm12096-201ENSMUST00000121149 829 ntBASIC3.35□□□□□ -1.87
Vps28Q9D1C8 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.35□□□□□ -1.87
Vps28Q9D1C8 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.35□□□□□ -1.87
Vps28Q9D1C8 Gm8289-201ENSMUST00000144814 1182 ntBASIC3.35□□□□□ -1.87
Vps28Q9D1C8 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Vps28Q9D1C8 Gm24914-201ENSMUST00000157285 313 ntBASIC3.35□□□□□ -1.87
Vps28Q9D1C8 Gm22597-201ENSMUST00000157602 80 ntBASIC3.35□□□□□ -1.87
Vps28Q9D1C8 Gm22532-201ENSMUST00000158822 140 ntBASIC3.35□□□□□ -1.87
Vps28Q9D1C8 Gm23059-201ENSMUST00000158978 107 ntBASIC3.35□□□□□ -1.87
Vps28Q9D1C8 Gm6264-202ENSMUST00000162896 1217 ntBASIC3.35□□□□□ -1.87
Vps28Q9D1C8 Gm24819-201ENSMUST00000175094 166 ntBASIC3.35□□□□□ -1.87
Vps28Q9D1C8 Gm27374-201ENSMUST00000183660 81 ntBASIC3.35□□□□□ -1.87
Vps28Q9D1C8 Mir496b-201ENSMUST00000184935 113 ntBASIC3.35□□□□□ -1.87
Vps28Q9D1C8 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Vps28Q9D1C8 Gm44324-201ENSMUST00000198517 135 ntBASIC3.35□□□□□ -1.87
Vps28Q9D1C8 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC3.35□□□□□ -1.87
Vps28Q9D1C8 Gm45366-201ENSMUST00000209828 384 ntBASIC3.35□□□□□ -1.87
Vps28Q9D1C8 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC3.35□□□□□ -1.87
Vps28Q9D1C8 AC108945.1-201ENSMUST00000226477 94 ntBASIC3.35□□□□□ -1.87
Vps28Q9D1C8 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Vps28Q9D1C8 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Vps28Q9D1C8 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.35□□□□□ -1.87
Vps28Q9D1C8 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.34□□□□□ -1.87
Vps28Q9D1C8 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
Vps28Q9D1C8 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Vps28Q9D1C8 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Vps28Q9D1C8 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Vps28Q9D1C8 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.34□□□□□ -1.87
Vps28Q9D1C8 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Vps28Q9D1C8 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Vps28Q9D1C8 Gm12782-201ENSMUST00000117519 727 ntBASIC3.34□□□□□ -1.87
Vps28Q9D1C8 Gm11356-201ENSMUST00000118974 192 ntBASIC3.34□□□□□ -1.87
Vps28Q9D1C8 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC3.34□□□□□ -1.87
Vps28Q9D1C8 Gm13901-201ENSMUST00000137252 468 ntBASIC3.34□□□□□ -1.87
Vps28Q9D1C8 Gm23981-201ENSMUST00000157136 106 ntBASIC3.34□□□□□ -1.87
Vps28Q9D1C8 Gm26393-201ENSMUST00000157625 129 ntBASIC3.34□□□□□ -1.87
Vps28Q9D1C8 Gm26041-201ENSMUST00000158148 108 ntBASIC3.34□□□□□ -1.87
Vps28Q9D1C8 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC3.34□□□□□ -1.87
Vps28Q9D1C8 Gm10075-201ENSMUST00000162030 545 ntBASIC3.34□□□□□ -1.87
Vps28Q9D1C8 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Vps28Q9D1C8 Gm25361-201ENSMUST00000179358 76 ntBASIC3.34□□□□□ -1.87
Vps28Q9D1C8 Gm24464-201ENSMUST00000179697 107 ntBASIC3.34□□□□□ -1.87
Vps28Q9D1C8 Gm11392-201ENSMUST00000181419 710 ntBASIC3.34□□□□□ -1.87
Vps28Q9D1C8 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC3.34□□□□□ -1.87
Vps28Q9D1C8 Gm28755-201ENSMUST00000185773 199 ntBASIC3.34□□□□□ -1.87
Vps28Q9D1C8 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.34□□□□□ -1.87
Vps28Q9D1C8 Gm29452-201ENSMUST00000187996 313 ntBASIC3.34□□□□□ -1.87
Vps28Q9D1C8 Gm28860-201ENSMUST00000188103 313 ntBASIC3.34□□□□□ -1.87
Vps28Q9D1C8 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC3.34□□□□□ -1.87
Vps28Q9D1C8 Gm37281-201ENSMUST00000192412 439 ntBASIC3.34□□□□□ -1.87
Vps28Q9D1C8 Gm37743-201ENSMUST00000194645 376 ntBASIC3.34□□□□□ -1.87
Vps28Q9D1C8 Gm37417-201ENSMUST00000195257 454 ntBASIC3.34□□□□□ -1.87
Vps28Q9D1C8 Gm8041-201ENSMUST00000199755 616 ntBASIC3.34□□□□□ -1.87
Vps28Q9D1C8 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.34□□□□□ -1.87
Vps28Q9D1C8 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC3.34□□□□□ -1.87
Vps28Q9D1C8 Gm19563-201ENSMUST00000222031 270 ntBASIC3.34□□□□□ -1.87
Vps28Q9D1C8 AC124489.2-201ENSMUST00000223930 589 ntBASIC3.34□□□□□ -1.87
Vps28Q9D1C8 AC114916.1-201ENSMUST00000228465 494 ntBASIC3.34□□□□□ -1.87
Vps28Q9D1C8 Gm22229-201ENSMUST00000082987 108 ntBASIC3.34□□□□□ -1.87
Vps28Q9D1C8 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.34□□□□□ -1.88
Vps28Q9D1C8 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.34□□□□□ -1.88
Vps28Q9D1C8 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Vps28Q9D1C8 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
Vps28Q9D1C8 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
Vps28Q9D1C8 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.34□□□□□ -1.88
Vps28Q9D1C8 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
Vps28Q9D1C8 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Vps28Q9D1C8 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Vps28Q9D1C8 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Vps28Q9D1C8 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Vps28Q9D1C8 Gm24118-201ENSMUST00000103972 126 ntBASIC3.33□□□□□ -1.88
Vps28Q9D1C8 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC3.33□□□□□ -1.88
Vps28Q9D1C8 Gm13614-201ENSMUST00000117306 503 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 173.6 ms