Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC4.25□□□□□ -1.73
Ushbp1Q8R370 Gm23887-201ENSMUST00000122683 172 ntBASIC4.25□□□□□ -1.73
Ushbp1Q8R370 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC4.25□□□□□ -1.73
Ushbp1Q8R370 Gm24876-201ENSMUST00000158780 92 ntBASIC4.25□□□□□ -1.73
Ushbp1Q8R370 Gm20543-201ENSMUST00000174200 726 ntBASIC4.25□□□□□ -1.73
Ushbp1Q8R370 Gm20656-201ENSMUST00000176925 518 ntBASIC4.25□□□□□ -1.73
Ushbp1Q8R370 Gm22908-201ENSMUST00000177620 110 ntBASIC4.25□□□□□ -1.73
Ushbp1Q8R370 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC4.25□□□□□ -1.73
Ushbp1Q8R370 Gm22633-201ENSMUST00000179834 107 ntBASIC4.25□□□□□ -1.73
Ushbp1Q8R370 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC4.25□□□□□ -1.73
Ushbp1Q8R370 Gm27640-201ENSMUST00000184580 147 ntBASIC4.25□□□□□ -1.73
Ushbp1Q8R370 Gm28299-201ENSMUST00000189908 339 ntBASIC4.25□□□□□ -1.73
Ushbp1Q8R370 Gm28506-201ENSMUST00000189937 150 ntBASIC4.25□□□□□ -1.73
Ushbp1Q8R370 Gm36934-201ENSMUST00000192007 306 ntBASIC4.25□□□□□ -1.73
Ushbp1Q8R370 Gm37204-201ENSMUST00000192389 3961 ntBASIC4.25□□□□□ -1.73
Ushbp1Q8R370 Gm18964-201ENSMUST00000193013 563 ntBASIC4.25□□□□□ -1.73
Ushbp1Q8R370 Gm32447-201ENSMUST00000194265 697 ntBASIC4.25□□□□□ -1.73
Ushbp1Q8R370 Gm44373-201ENSMUST00000196112 169 ntBASIC4.25□□□□□ -1.73
Ushbp1Q8R370 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC4.25□□□□□ -1.73
Ushbp1Q8R370 Gm42594-201ENSMUST00000199511 246 ntBASIC4.25□□□□□ -1.73
Ushbp1Q8R370 Gm44468-201ENSMUST00000199516 105 ntBASIC4.25□□□□□ -1.73
Ushbp1Q8R370 Gm19147-201ENSMUST00000199622 652 ntBASIC4.25□□□□□ -1.73
Ushbp1Q8R370 Gm44718-201ENSMUST00000206886 359 ntBASIC4.25□□□□□ -1.73
Ushbp1Q8R370 Gm45387-201ENSMUST00000209792 632 ntBASIC4.25□□□□□ -1.73
Ushbp1Q8R370 Gm45317-201ENSMUST00000210385 223 ntBASIC4.25□□□□□ -1.73
Ushbp1Q8R370 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ushbp1Q8R370 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ushbp1Q8R370 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ushbp1Q8R370 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ushbp1Q8R370 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ushbp1Q8R370 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
Ushbp1Q8R370 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Ushbp1Q8R370 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ushbp1Q8R370 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
Ushbp1Q8R370 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Ushbp1Q8R370 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Ushbp1Q8R370 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Ushbp1Q8R370 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Ushbp1Q8R370 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ushbp1Q8R370 Gm25111-201ENSMUST00000116686 147 ntBASIC4.24□□□□□ -1.73
Ushbp1Q8R370 Gm11221-201ENSMUST00000117230 597 ntBASIC4.24□□□□□ -1.73
Ushbp1Q8R370 Gm11576-201ENSMUST00000117433 417 ntBASIC4.24□□□□□ -1.73
Ushbp1Q8R370 Gm11982-201ENSMUST00000121480 314 ntBASIC4.24□□□□□ -1.73
Ushbp1Q8R370 Gm23957-201ENSMUST00000157209 90 ntBASIC4.24□□□□□ -1.73
Ushbp1Q8R370 Gm22849-201ENSMUST00000157713 307 ntBASIC4.24□□□□□ -1.73
Ushbp1Q8R370 Gm24240-201ENSMUST00000157785 135 ntBASIC4.24□□□□□ -1.73
Ushbp1Q8R370 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ushbp1Q8R370 Gm25243-201ENSMUST00000174912 207 ntBASIC4.24□□□□□ -1.73
Ushbp1Q8R370 Mir3070b-201ENSMUST00000175205 89 ntBASIC4.24□□□□□ -1.73
Ushbp1Q8R370 Gm23152-201ENSMUST00000175322 116 ntBASIC4.24□□□□□ -1.73
Ushbp1Q8R370 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC4.24□□□□□ -1.73
Ushbp1Q8R370 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ushbp1Q8R370 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC4.24□□□□□ -1.73
Ushbp1Q8R370 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC4.24□□□□□ -1.73
Ushbp1Q8R370 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC4.24□□□□□ -1.73
Ushbp1Q8R370 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC4.24□□□□□ -1.73
Ushbp1Q8R370 Gm4479-201ENSMUST00000178807 171 ntBASIC4.24□□□□□ -1.73
Ushbp1Q8R370 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC4.24□□□□□ -1.73
Ushbp1Q8R370 Gm25361-201ENSMUST00000179358 76 ntBASIC4.24□□□□□ -1.73
Ushbp1Q8R370 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC4.24□□□□□ -1.73
Ushbp1Q8R370 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC4.24□□□□□ -1.73
Ushbp1Q8R370 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC4.24□□□□□ -1.73
Ushbp1Q8R370 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Ushbp1Q8R370 Gm28069-201ENSMUST00000189926 214 ntBASIC4.24□□□□□ -1.73
Ushbp1Q8R370 Gm19193-201ENSMUST00000190263 590 ntBASIC4.24□□□□□ -1.73
Ushbp1Q8R370 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Ushbp1Q8R370 Gm37743-201ENSMUST00000194645 376 ntBASIC4.24□□□□□ -1.73
Ushbp1Q8R370 Gm43669-201ENSMUST00000198229 436 ntBASIC4.24□□□□□ -1.73
Ushbp1Q8R370 Gm44870-201ENSMUST00000207291 357 ntBASIC4.24□□□□□ -1.73
Ushbp1Q8R370 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC4.24□□□□□ -1.73
Ushbp1Q8R370 Gm7751-201ENSMUST00000212868 709 ntBASIC4.24□□□□□ -1.73
Ushbp1Q8R370 CT030187.1-201ENSMUST00000220605 252 ntBASIC4.24□□□□□ -1.73
Ushbp1Q8R370 AC147545.1-201ENSMUST00000227528 108 ntBASIC4.24□□□□□ -1.73
Ushbp1Q8R370 Gm26449-201ENSMUST00000082452 104 ntBASIC4.24□□□□□ -1.73
Ushbp1Q8R370 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Ushbp1Q8R370 Gm37761-201ENSMUST00000194989 2098 ntBASIC4.24□□□□□ -1.73
Ushbp1Q8R370 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Ushbp1Q8R370 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ushbp1Q8R370 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Ushbp1Q8R370 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Ushbp1Q8R370 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ushbp1Q8R370 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Ushbp1Q8R370 Gm25376-201ENSMUST00000104340 133 ntBASIC4.23□□□□□ -1.73
Ushbp1Q8R370 Mir294-201ENSMUST00000104710 84 ntBASIC4.23□□□□□ -1.73
Ushbp1Q8R370 Gm15231-201ENSMUST00000119174 447 ntBASIC4.23□□□□□ -1.73
Ushbp1Q8R370 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC4.23□□□□□ -1.73
Ushbp1Q8R370 Gm3470-201ENSMUST00000160819 420 ntBASIC4.23□□□□□ -1.73
Ushbp1Q8R370 Gm15900-201ENSMUST00000161584 342 ntBASIC4.23□□□□□ -1.73
Ushbp1Q8R370 Gm8816-201ENSMUST00000182280 1163 ntBASIC4.23□□□□□ -1.73
Ushbp1Q8R370 Gm27392-201ENSMUST00000185041 101 ntBASIC4.23□□□□□ -1.73
Ushbp1Q8R370 Mir6372-201ENSMUST00000185114 109 ntBASIC4.23□□□□□ -1.73
Ushbp1Q8R370 Gm29229-201ENSMUST00000188874 323 ntBASIC4.23□□□□□ -1.73
Ushbp1Q8R370 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC4.23□□□□□ -1.73
Ushbp1Q8R370 Gm37455-201ENSMUST00000191993 529 ntBASIC4.23□□□□□ -1.73
Ushbp1Q8R370 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC4.23□□□□□ -1.73
Ushbp1Q8R370 Gm44391-201ENSMUST00000198490 93 ntBASIC4.23□□□□□ -1.73
Ushbp1Q8R370 Gm42526-201ENSMUST00000198956 393 ntBASIC4.23□□□□□ -1.73
Ushbp1Q8R370 Gm43155-201ENSMUST00000202661 494 ntBASIC4.23□□□□□ -1.73
Ushbp1Q8R370 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC4.23□□□□□ -1.73
Ushbp1Q8R370 Gm6240-201ENSMUST00000208014 473 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms