Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm29407-201ENSMUST00000191468 696 ntBASIC3.93□□□□□ -1.78
Syne4Q8CII8 Gm28724-202ENSMUST00000194218 295 ntBASIC3.93□□□□□ -1.78
Syne4Q8CII8 Gm30638-201ENSMUST00000195570 656 ntBASIC3.93□□□□□ -1.78
Syne4Q8CII8 Gm36728-201ENSMUST00000195782 665 ntBASIC3.93□□□□□ -1.78
Syne4Q8CII8 Gm18384-201ENSMUST00000195974 808 ntBASIC3.93□□□□□ -1.78
Syne4Q8CII8 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC3.93□□□□□ -1.78
Syne4Q8CII8 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Syne4Q8CII8 AC144628.2-201ENSMUST00000227374 352 ntBASIC3.93□□□□□ -1.78
Syne4Q8CII8 AC098719.1-201ENSMUST00000228920 371 ntBASIC3.93□□□□□ -1.78
Syne4Q8CII8 Gm9845-201ENSMUST00000056409 598 ntBASIC3.93□□□□□ -1.78
Syne4Q8CII8 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.93□□□□□ -1.78
Syne4Q8CII8 Gm23093-201ENSMUST00000083450 102 ntBASIC3.93□□□□□ -1.78
Syne4Q8CII8 Gm8074-201ENSMUST00000095071 252 ntBASIC3.93□□□□□ -1.78
Syne4Q8CII8 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Syne4Q8CII8 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Syne4Q8CII8 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC3.92□□□□□ -1.78
Syne4Q8CII8 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Syne4Q8CII8 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Syne4Q8CII8 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.92□□□□□ -1.78
Syne4Q8CII8 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Syne4Q8CII8 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Syne4Q8CII8 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Syne4Q8CII8 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC3.92□□□□□ -1.78
Syne4Q8CII8 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC3.92□□□□□ -1.78
Syne4Q8CII8 Gm14657-201ENSMUST00000117461 302 ntBASIC3.92□□□□□ -1.78
Syne4Q8CII8 Gm12806-201ENSMUST00000119384 268 ntBASIC3.92□□□□□ -1.78
Syne4Q8CII8 Gm15381-201ENSMUST00000121501 1156 ntBASIC3.92□□□□□ -1.78
Syne4Q8CII8 Gm12819-201ENSMUST00000122223 629 ntBASIC3.92□□□□□ -1.78
Syne4Q8CII8 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC3.92□□□□□ -1.78
Syne4Q8CII8 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC3.92□□□□□ -1.78
Syne4Q8CII8 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC3.92□□□□□ -1.78
Syne4Q8CII8 Gm21673-201ENSMUST00000186640 436 ntBASIC3.92□□□□□ -1.78
Syne4Q8CII8 Gm21135-201ENSMUST00000189023 436 ntBASIC3.92□□□□□ -1.78
Syne4Q8CII8 Gm28779-201ENSMUST00000189678 323 ntBASIC3.92□□□□□ -1.78
Syne4Q8CII8 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.92□□□□□ -1.78
Syne4Q8CII8 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Syne4Q8CII8 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC3.92□□□□□ -1.78
Syne4Q8CII8 AC109212.1-201ENSMUST00000215561 427 ntBASIC3.92□□□□□ -1.78
Syne4Q8CII8 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC3.92□□□□□ -1.78
Syne4Q8CII8 Gm46193-201ENSMUST00000219399 364 ntBASIC3.92□□□□□ -1.78
Syne4Q8CII8 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC3.92□□□□□ -1.78
Syne4Q8CII8 AC172751.1-201ENSMUST00000226887 440 ntBASIC3.92□□□□□ -1.78
Syne4Q8CII8 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Syne4Q8CII8 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Syne4Q8CII8 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Syne4Q8CII8 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Syne4Q8CII8 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Syne4Q8CII8 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Syne4Q8CII8 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Syne4Q8CII8 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Syne4Q8CII8 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC3.91□□□□□ -1.78
Syne4Q8CII8 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Syne4Q8CII8 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
Syne4Q8CII8 Gm24068-201ENSMUST00000104513 132 ntBASIC3.91□□□□□ -1.78
Syne4Q8CII8 Mir669d-2-201ENSMUST00000116854 86 ntBASIC3.91□□□□□ -1.78
Syne4Q8CII8 Gm11582-201ENSMUST00000121041 236 ntBASIC3.91□□□□□ -1.78
Syne4Q8CII8 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC3.91□□□□□ -1.78
Syne4Q8CII8 Gm8840-201ENSMUST00000122454 386 ntBASIC3.91□□□□□ -1.78
Syne4Q8CII8 Gm14364-201ENSMUST00000129209 267 ntBASIC3.91□□□□□ -1.78
Syne4Q8CII8 Gm23585-201ENSMUST00000157656 102 ntBASIC3.91□□□□□ -1.78
Syne4Q8CII8 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Syne4Q8CII8 Gm27588-201ENSMUST00000185096 263 ntBASIC3.91□□□□□ -1.78
Syne4Q8CII8 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC3.91□□□□□ -1.78
Syne4Q8CII8 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.91□□□□□ -1.78
Syne4Q8CII8 Gm19641-201ENSMUST00000188432 417 ntBASIC3.91□□□□□ -1.78
Syne4Q8CII8 Gm5368-201ENSMUST00000189012 589 ntBASIC3.91□□□□□ -1.78
Syne4Q8CII8 AC116589.3-202ENSMUST00000221770 649 ntBASIC3.91□□□□□ -1.78
Syne4Q8CII8 AC116589.6-201ENSMUST00000222252 649 ntBASIC3.91□□□□□ -1.78
Syne4Q8CII8 AC115289.1-201ENSMUST00000224915 522 ntBASIC3.91□□□□□ -1.78
Syne4Q8CII8 AC129541.1-201ENSMUST00000226940 523 ntBASIC3.91□□□□□ -1.78
Syne4Q8CII8 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Syne4Q8CII8 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Syne4Q8CII8 Gm26129-201ENSMUST00000082719 107 ntBASIC3.91□□□□□ -1.78
Syne4Q8CII8 Gm25853-201ENSMUST00000082793 132 ntBASIC3.91□□□□□ -1.78
Syne4Q8CII8 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
Syne4Q8CII8 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.91□□□□□ -1.78
Syne4Q8CII8 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
Syne4Q8CII8 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.9□□□□□ -1.78
Syne4Q8CII8 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.9□□□□□ -1.78
Syne4Q8CII8 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Syne4Q8CII8 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Syne4Q8CII8 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Syne4Q8CII8 Gm11221-201ENSMUST00000117230 597 ntBASIC3.9□□□□□ -1.79
Syne4Q8CII8 Gm14647-201ENSMUST00000119392 680 ntBASIC3.9□□□□□ -1.79
Syne4Q8CII8 Gm13339-201ENSMUST00000120651 510 ntBASIC3.9□□□□□ -1.79
Syne4Q8CII8 Gm16021-201ENSMUST00000121176 219 ntBASIC3.9□□□□□ -1.79
Syne4Q8CII8 Gm12578-201ENSMUST00000121244 417 ntBASIC3.9□□□□□ -1.79
Syne4Q8CII8 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Syne4Q8CII8 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC3.9□□□□□ -1.79
Syne4Q8CII8 Gm23668-201ENSMUST00000157465 111 ntBASIC3.9□□□□□ -1.79
Syne4Q8CII8 Gm22836-201ENSMUST00000158441 61 ntBASIC3.9□□□□□ -1.79
Syne4Q8CII8 Nron-204ENSMUST00000158971 370 ntBASIC3.9□□□□□ -1.79
Syne4Q8CII8 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC3.9□□□□□ -1.79
Syne4Q8CII8 Mir5129-201ENSMUST00000174938 78 ntBASIC3.9□□□□□ -1.79
Syne4Q8CII8 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.9□□□□□ -1.79
Syne4Q8CII8 Gm4761-201ENSMUST00000178086 582 ntBASIC3.9□□□□□ -1.79
Syne4Q8CII8 Gm24019-201ENSMUST00000178620 107 ntBASIC3.9□□□□□ -1.79
Syne4Q8CII8 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Syne4Q8CII8 Gm26243-201ENSMUST00000179260 107 ntBASIC3.9□□□□□ -1.79
Syne4Q8CII8 Snord116l14-201ENSMUST00000179875 94 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 100.7 ms