Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm15065-201ENSMUST00000121699 273 ntBASIC1.37□□□□□ -2.19
Col6a6Q8C6K9 Gm23583-201ENSMUST00000158533 289 ntBASIC1.37□□□□□ -2.19
Col6a6Q8C6K9 Gm22646-201ENSMUST00000175130 115 ntBASIC1.37□□□□□ -2.19
Col6a6Q8C6K9 Gm23617-201ENSMUST00000175410 95 ntBASIC1.37□□□□□ -2.19
Col6a6Q8C6K9 Mir7052-201ENSMUST00000184821 65 ntBASIC1.37□□□□□ -2.19
Col6a6Q8C6K9 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC1.37□□□□□ -2.19
Col6a6Q8C6K9 Gm36954-201ENSMUST00000195362 363 ntBASIC1.37□□□□□ -2.19
Col6a6Q8C6K9 Gm5322-201ENSMUST00000206142 699 ntBASIC1.37□□□□□ -2.19
Col6a6Q8C6K9 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC1.37□□□□□ -2.19
Col6a6Q8C6K9 AC129323.1-201ENSMUST00000216733 470 ntBASIC1.37□□□□□ -2.19
Col6a6Q8C6K9 AC161572.1-201ENSMUST00000227486 640 ntBASIC1.37□□□□□ -2.19
Col6a6Q8C6K9 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
Col6a6Q8C6K9 Snord14d-201ENSMUST00000083424 86 ntBASIC1.37□□□□□ -2.19
Col6a6Q8C6K9 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Col6a6Q8C6K9 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
Col6a6Q8C6K9 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
Col6a6Q8C6K9 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
Col6a6Q8C6K9 Gm24342-201ENSMUST00000103907 104 ntBASIC1.36□□□□□ -2.19
Col6a6Q8C6K9 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
Col6a6Q8C6K9 Gm14923-201ENSMUST00000118270 155 ntBASIC1.36□□□□□ -2.19
Col6a6Q8C6K9 Gm23893-201ENSMUST00000158106 134 ntBASIC1.36□□□□□ -2.19
Col6a6Q8C6K9 Gm46993-201ENSMUST00000220708 259 ntBASIC1.36□□□□□ -2.19
Col6a6Q8C6K9 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
Col6a6Q8C6K9 Gm15161-201ENSMUST00000117340 387 ntBASIC1.36□□□□□ -2.19
Col6a6Q8C6K9 Gm12880-201ENSMUST00000120652 494 ntBASIC1.36□□□□□ -2.19
Col6a6Q8C6K9 Gm12706-201ENSMUST00000121588 698 ntBASIC1.36□□□□□ -2.19
Col6a6Q8C6K9 Gm26049-201ENSMUST00000157313 108 ntBASIC1.36□□□□□ -2.19
Col6a6Q8C6K9 Gm23636-201ENSMUST00000175070 95 ntBASIC1.36□□□□□ -2.19
Col6a6Q8C6K9 Gm29604-201ENSMUST00000187176 163 ntBASIC1.36□□□□□ -2.19
Col6a6Q8C6K9 Gm37676-201ENSMUST00000195496 507 ntBASIC1.36□□□□□ -2.19
Col6a6Q8C6K9 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC1.36□□□□□ -2.19
Col6a6Q8C6K9 AC139350.4-201ENSMUST00000228483 798 ntBASIC1.36□□□□□ -2.19
Col6a6Q8C6K9 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
Col6a6Q8C6K9 Gm15095-201ENSMUST00000118996 1430 ntBASIC1.35□□□□□ -2.19
Col6a6Q8C6K9 Gm12891-201ENSMUST00000119358 240 ntBASIC1.35□□□□□ -2.19
Col6a6Q8C6K9 Gm15452-201ENSMUST00000119877 240 ntBASIC1.35□□□□□ -2.19
Col6a6Q8C6K9 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
Col6a6Q8C6K9 Gm20648-201ENSMUST00000175815 328 ntBASIC1.35□□□□□ -2.19
Col6a6Q8C6K9 Gm44403-201ENSMUST00000198554 129 ntBASIC1.35□□□□□ -2.19
Col6a6Q8C6K9 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.35□□□□□ -2.19
Col6a6Q8C6K9 AC122194.1-201ENSMUST00000220549 293 ntBASIC1.35□□□□□ -2.19
Col6a6Q8C6K9 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
Col6a6Q8C6K9 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
Col6a6Q8C6K9 Gm5471-201ENSMUST00000072732 337 ntBASIC1.35□□□□□ -2.19
Col6a6Q8C6K9 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
Col6a6Q8C6K9 Gm11438-201ENSMUST00000121582 189 ntBASIC1.35□□□□□ -2.19
Col6a6Q8C6K9 Gm24174-201ENSMUST00000158933 111 ntBASIC1.35□□□□□ -2.19
Col6a6Q8C6K9 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC1.35□□□□□ -2.19
Col6a6Q8C6K9 Gm37417-201ENSMUST00000195257 454 ntBASIC1.35□□□□□ -2.19
Col6a6Q8C6K9 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC1.35□□□□□ -2.19
Col6a6Q8C6K9 AC157017.1-201ENSMUST00000220148 364 ntBASIC1.35□□□□□ -2.19
Col6a6Q8C6K9 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC1.35□□□□□ -2.19
Col6a6Q8C6K9 AC147639.1-201ENSMUST00000224216 661 ntBASIC1.35□□□□□ -2.19
Col6a6Q8C6K9 AC117588.2-201ENSMUST00000228340 311 ntBASIC1.35□□□□□ -2.19
Col6a6Q8C6K9 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
Col6a6Q8C6K9 Gm26029-201ENSMUST00000158659 132 ntBASIC1.34□□□□□ -2.2
Col6a6Q8C6K9 Gm6395-201ENSMUST00000167639 691 ntBASIC1.34□□□□□ -2.2
Col6a6Q8C6K9 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC1.34□□□□□ -2.2
Col6a6Q8C6K9 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.34□□□□□ -2.2
Col6a6Q8C6K9 Gm44718-201ENSMUST00000206886 359 ntBASIC1.34□□□□□ -2.2
Col6a6Q8C6K9 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC1.34□□□□□ -2.2
Col6a6Q8C6K9 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC1.34□□□□□ -2.2
Col6a6Q8C6K9 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC1.34□□□□□ -2.2
Col6a6Q8C6K9 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
Col6a6Q8C6K9 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
Col6a6Q8C6K9 Gm22494-201ENSMUST00000104495 128 ntBASIC1.33□□□□□ -2.2
Col6a6Q8C6K9 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
Col6a6Q8C6K9 Gm13460-201ENSMUST00000121274 353 ntBASIC1.33□□□□□ -2.2
Col6a6Q8C6K9 Gm14694-201ENSMUST00000121856 282 ntBASIC1.33□□□□□ -2.2
Col6a6Q8C6K9 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Col6a6Q8C6K9 Gm23229-201ENSMUST00000157297 105 ntBASIC1.33□□□□□ -2.2
Col6a6Q8C6K9 Gm25025-201ENSMUST00000175018 111 ntBASIC1.33□□□□□ -2.2
Col6a6Q8C6K9 CT025606.1-201ENSMUST00000218273 324 ntBASIC1.33□□□□□ -2.2
Col6a6Q8C6K9 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
Col6a6Q8C6K9 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.33□□□□□ -2.2
Col6a6Q8C6K9 Gm24406-201ENSMUST00000083026 128 ntBASIC1.33□□□□□ -2.2
Col6a6Q8C6K9 Gm24319-201ENSMUST00000083389 107 ntBASIC1.33□□□□□ -2.2
Col6a6Q8C6K9 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
Col6a6Q8C6K9 Gm37063-201ENSMUST00000194678 3520 ntBASIC1.33□□□□□ -2.2
Col6a6Q8C6K9 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.33□□□□□ -2.2
Col6a6Q8C6K9 Gm11357-201ENSMUST00000119758 954 ntBASIC1.33□□□□□ -2.2
Col6a6Q8C6K9 Gm11556-201ENSMUST00000120751 288 ntBASIC1.33□□□□□ -2.2
Col6a6Q8C6K9 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC1.33□□□□□ -2.2
Col6a6Q8C6K9 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Col6a6Q8C6K9 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC1.33□□□□□ -2.2
Col6a6Q8C6K9 Gm3010-201ENSMUST00000198805 448 ntBASIC1.33□□□□□ -2.2
Col6a6Q8C6K9 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Col6a6Q8C6K9 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC1.33□□□□□ -2.2
Col6a6Q8C6K9 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC1.33□□□□□ -2.2
Col6a6Q8C6K9 AC102575.1-201ENSMUST00000225348 547 ntBASIC1.33□□□□□ -2.2
Col6a6Q8C6K9 AC160550.3-201ENSMUST00000226818 400 ntBASIC1.33□□□□□ -2.2
Col6a6Q8C6K9 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
Col6a6Q8C6K9 Gm14253-201ENSMUST00000122112 639 ntBASIC1.32□□□□□ -2.2
Col6a6Q8C6K9 Gm22345-201ENSMUST00000122644 107 ntBASIC1.32□□□□□ -2.2
Col6a6Q8C6K9 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC1.32□□□□□ -2.2
Col6a6Q8C6K9 Gm23329-201ENSMUST00000157415 108 ntBASIC1.32□□□□□ -2.2
Col6a6Q8C6K9 Gm24770-201ENSMUST00000158505 92 ntBASIC1.32□□□□□ -2.2
Col6a6Q8C6K9 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
Col6a6Q8C6K9 Gm43513-201ENSMUST00000199779 1076 ntBASIC1.32□□□□□ -2.2
Col6a6Q8C6K9 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC1.32□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms