Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm25930-201ENSMUST00000082785 107 ntBASIC5.2□□□□□ -1.58
Trim47Q8C0E3 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Trim47Q8C0E3 Gm37226-201ENSMUST00000191644 3255 ntBASIC5.2□□□□□ -1.58
Trim47Q8C0E3 AC162938.2-205ENSMUST00000217551 2828 ntBASIC5.19□□□□□ -1.58
Trim47Q8C0E3 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Trim47Q8C0E3 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Trim47Q8C0E3 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Trim47Q8C0E3 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
Trim47Q8C0E3 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Trim47Q8C0E3 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
Trim47Q8C0E3 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC5.19□□□□□ -1.58
Trim47Q8C0E3 Gm22321-201ENSMUST00000157152 104 ntBASIC5.19□□□□□ -1.58
Trim47Q8C0E3 Gm24774-201ENSMUST00000157384 134 ntBASIC5.19□□□□□ -1.58
Trim47Q8C0E3 Gm26085-201ENSMUST00000157900 116 ntBASIC5.19□□□□□ -1.58
Trim47Q8C0E3 Gm26701-201ENSMUST00000181571 234 ntBASIC5.19□□□□□ -1.58
Trim47Q8C0E3 Gm28660-201ENSMUST00000186496 253 ntBASIC5.19□□□□□ -1.58
Trim47Q8C0E3 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC5.19□□□□□ -1.58
Trim47Q8C0E3 Gm37123-201ENSMUST00000192994 1171 ntBASIC5.19□□□□□ -1.58
Trim47Q8C0E3 Gm43828-201ENSMUST00000196890 639 ntBASIC5.19□□□□□ -1.58
Trim47Q8C0E3 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC5.19□□□□□ -1.58
Trim47Q8C0E3 Gm39197-201ENSMUST00000212069 457 ntBASIC5.19□□□□□ -1.58
Trim47Q8C0E3 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC5.19□□□□□ -1.58
Trim47Q8C0E3 AC158807.1-201ENSMUST00000217959 187 ntBASIC5.19□□□□□ -1.58
Trim47Q8C0E3 Apoo-ps-201ENSMUST00000061241 586 ntBASIC5.19□□□□□ -1.58
Trim47Q8C0E3 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
Trim47Q8C0E3 Gm23722-201ENSMUST00000083002 130 ntBASIC5.19□□□□□ -1.58
Trim47Q8C0E3 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Trim47Q8C0E3 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Trim47Q8C0E3 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
Trim47Q8C0E3 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Trim47Q8C0E3 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Trim47Q8C0E3 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC5.18□□□□□ -1.58
Trim47Q8C0E3 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Trim47Q8C0E3 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Trim47Q8C0E3 Gm14304-201ENSMUST00000117272 446 ntBASIC5.18□□□□□ -1.58
Trim47Q8C0E3 Defa-ps15-201ENSMUST00000118178 477 ntBASIC5.18□□□□□ -1.58
Trim47Q8C0E3 Gm12550-201ENSMUST00000118478 329 ntBASIC5.18□□□□□ -1.58
Trim47Q8C0E3 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC5.18□□□□□ -1.58
Trim47Q8C0E3 Gm24507-201ENSMUST00000157683 134 ntBASIC5.18□□□□□ -1.58
Trim47Q8C0E3 Gm16162-201ENSMUST00000162296 297 ntBASIC5.18□□□□□ -1.58
Trim47Q8C0E3 Gm16318-201ENSMUST00000162402 601 ntBASIC5.18□□□□□ -1.58
Trim47Q8C0E3 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC5.18□□□□□ -1.58
Trim47Q8C0E3 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC5.18□□□□□ -1.58
Trim47Q8C0E3 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Trim47Q8C0E3 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC5.18□□□□□ -1.58
Trim47Q8C0E3 Gm8069-201ENSMUST00000197887 154 ntBASIC5.18□□□□□ -1.58
Trim47Q8C0E3 Gm45539-201ENSMUST00000210313 428 ntBASIC5.18□□□□□ -1.58
Trim47Q8C0E3 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC5.18□□□□□ -1.58
Trim47Q8C0E3 AC098718.2-201ENSMUST00000226822 285 ntBASIC5.18□□□□□ -1.58
Trim47Q8C0E3 Gm10916-201ENSMUST00000080330 483 ntBASIC5.18□□□□□ -1.58
Trim47Q8C0E3 Mir10a-201ENSMUST00000083585 110 ntBASIC5.18□□□□□ -1.58
Trim47Q8C0E3 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Trim47Q8C0E3 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Trim47Q8C0E3 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Trim47Q8C0E3 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Trim47Q8C0E3 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Trim47Q8C0E3 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Trim47Q8C0E3 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Trim47Q8C0E3 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Trim47Q8C0E3 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Trim47Q8C0E3 Gm26500-201ENSMUST00000101867 106 ntBASIC5.17□□□□□ -1.58
Trim47Q8C0E3 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC5.17□□□□□ -1.58
Trim47Q8C0E3 Mir466b-3-201ENSMUST00000103806 81 ntBASIC5.17□□□□□ -1.58
Trim47Q8C0E3 Gm12062-201ENSMUST00000117533 259 ntBASIC5.17□□□□□ -1.58
Trim47Q8C0E3 Gm14878-201ENSMUST00000118167 293 ntBASIC5.17□□□□□ -1.58
Trim47Q8C0E3 Gm15263-201ENSMUST00000121556 642 ntBASIC5.17□□□□□ -1.58
Trim47Q8C0E3 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC5.17□□□□□ -1.58
Trim47Q8C0E3 Gm11204-201ENSMUST00000122438 147 ntBASIC5.17□□□□□ -1.58
Trim47Q8C0E3 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC5.17□□□□□ -1.58
Trim47Q8C0E3 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Trim47Q8C0E3 Gm25054-201ENSMUST00000157370 97 ntBASIC5.17□□□□□ -1.58
Trim47Q8C0E3 Gm23902-201ENSMUST00000157571 134 ntBASIC5.17□□□□□ -1.58
Trim47Q8C0E3 Gm23584-201ENSMUST00000157655 129 ntBASIC5.17□□□□□ -1.58
Trim47Q8C0E3 Gm23640-201ENSMUST00000157860 104 ntBASIC5.17□□□□□ -1.58
Trim47Q8C0E3 Gm22789-201ENSMUST00000157884 130 ntBASIC5.17□□□□□ -1.58
Trim47Q8C0E3 Gm25863-201ENSMUST00000158249 329 ntBASIC5.17□□□□□ -1.58
Trim47Q8C0E3 Mir6393-201ENSMUST00000183709 94 ntBASIC5.17□□□□□ -1.58
Trim47Q8C0E3 Mir6418-201ENSMUST00000185075 115 ntBASIC5.17□□□□□ -1.58
Trim47Q8C0E3 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Trim47Q8C0E3 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Trim47Q8C0E3 Gm6065-201ENSMUST00000081336 492 ntBASIC5.17□□□□□ -1.58
Trim47Q8C0E3 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Trim47Q8C0E3 Gm43426-201ENSMUST00000197287 2597 ntBASIC5.17□□□□□ -1.58
Trim47Q8C0E3 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Trim47Q8C0E3 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Trim47Q8C0E3 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Trim47Q8C0E3 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Trim47Q8C0E3 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC5.17□□□□□ -1.58
Trim47Q8C0E3 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Trim47Q8C0E3 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Trim47Q8C0E3 Gm13961-201ENSMUST00000119282 4772 ntBASIC5.16□□□□□ -1.58
Trim47Q8C0E3 Gm13477-201ENSMUST00000121620 2687 ntBASIC5.16□□□□□ -1.58
Trim47Q8C0E3 Zscan4a-201ENSMUST00000210573 2279 ntBASIC5.16□□□□□ -1.58
Trim47Q8C0E3 Gm37628-201ENSMUST00000194644 5440 ntBASIC5.16□□□□□ -1.58
Trim47Q8C0E3 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Trim47Q8C0E3 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Trim47Q8C0E3 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Trim47Q8C0E3 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Trim47Q8C0E3 Gm14748-201ENSMUST00000119819 411 ntBASIC5.16□□□□□ -1.58
Trim47Q8C0E3 Gm11742-201ENSMUST00000119903 233 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms