Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Gm11367-201ENSMUST00000117802 120 ntBASIC2.31□□□□□ -2.04
SprnQ8BWU1 Gm14128-201ENSMUST00000119514 1011 ntBASIC2.31□□□□□ -2.04
SprnQ8BWU1 Gm11991-201ENSMUST00000119652 1074 ntBASIC2.31□□□□□ -2.04
SprnQ8BWU1 Gm13627-201ENSMUST00000119700 706 ntBASIC2.31□□□□□ -2.04
SprnQ8BWU1 Gm16363-201ENSMUST00000132460 877 ntBASIC2.31□□□□□ -2.04
SprnQ8BWU1 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SprnQ8BWU1 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SprnQ8BWU1 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC2.31□□□□□ -2.04
SprnQ8BWU1 Gm25280-201ENSMUST00000157269 101 ntBASIC2.31□□□□□ -2.04
SprnQ8BWU1 Gm26041-201ENSMUST00000158148 108 ntBASIC2.31□□□□□ -2.04
SprnQ8BWU1 Gm26406-201ENSMUST00000158503 124 ntBASIC2.31□□□□□ -2.04
SprnQ8BWU1 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
SprnQ8BWU1 Gm20415-201ENSMUST00000172877 423 ntBASIC2.31□□□□□ -2.04
SprnQ8BWU1 Gm27786-201ENSMUST00000184337 70 ntBASIC2.31□□□□□ -2.04
SprnQ8BWU1 Gm29073-201ENSMUST00000185563 664 ntBASIC2.31□□□□□ -2.04
SprnQ8BWU1 Gm28623-201ENSMUST00000187219 192 ntBASIC2.31□□□□□ -2.04
SprnQ8BWU1 Gm29165-201ENSMUST00000190655 664 ntBASIC2.31□□□□□ -2.04
SprnQ8BWU1 Gm29211-201ENSMUST00000191470 664 ntBASIC2.31□□□□□ -2.04
SprnQ8BWU1 Gm38076-201ENSMUST00000193889 450 ntBASIC2.31□□□□□ -2.04
SprnQ8BWU1 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC2.31□□□□□ -2.04
SprnQ8BWU1 Gm6615-201ENSMUST00000199426 631 ntBASIC2.31□□□□□ -2.04
SprnQ8BWU1 Gm44125-201ENSMUST00000203068 448 ntBASIC2.31□□□□□ -2.04
SprnQ8BWU1 Gm19253-201ENSMUST00000204279 307 ntBASIC2.31□□□□□ -2.04
SprnQ8BWU1 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC2.31□□□□□ -2.04
SprnQ8BWU1 CT010455.1-201ENSMUST00000218579 413 ntBASIC2.31□□□□□ -2.04
SprnQ8BWU1 AC166358.6-201ENSMUST00000221834 1206 ntBASIC2.31□□□□□ -2.04
SprnQ8BWU1 Gm46436-201ENSMUST00000221851 1294 ntBASIC2.31□□□□□ -2.04
SprnQ8BWU1 AC153662.1-201ENSMUST00000222220 270 ntBASIC2.31□□□□□ -2.04
SprnQ8BWU1 AC173481.1-201ENSMUST00000223351 270 ntBASIC2.31□□□□□ -2.04
SprnQ8BWU1 AC125223.1-203ENSMUST00000225304 498 ntBASIC2.31□□□□□ -2.04
SprnQ8BWU1 AC161758.1-201ENSMUST00000226123 310 ntBASIC2.31□□□□□ -2.04
SprnQ8BWU1 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.31□□□□□ -2.04
SprnQ8BWU1 AC109172.1-201ENSMUST00000227503 187 ntBASIC2.31□□□□□ -2.04
SprnQ8BWU1 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
SprnQ8BWU1 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SprnQ8BWU1 Gm10088-201ENSMUST00000074116 423 ntBASIC2.31□□□□□ -2.04
SprnQ8BWU1 Gm10038-201ENSMUST00000077233 441 ntBASIC2.31□□□□□ -2.04
SprnQ8BWU1 Gm24446-201ENSMUST00000083982 156 ntBASIC2.31□□□□□ -2.04
SprnQ8BWU1 Gm7171-201ENSMUST00000177413 1349 ntBASIC2.31□□□□□ -2.04
SprnQ8BWU1 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
SprnQ8BWU1 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
SprnQ8BWU1 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
SprnQ8BWU1 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.3□□□□□ -2.04
SprnQ8BWU1 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
SprnQ8BWU1 Mir883a-201ENSMUST00000104824 76 ntBASIC2.3□□□□□ -2.04
SprnQ8BWU1 Gm14197-201ENSMUST00000117480 1049 ntBASIC2.3□□□□□ -2.04
SprnQ8BWU1 Gm11577-201ENSMUST00000118030 737 ntBASIC2.3□□□□□ -2.04
SprnQ8BWU1 Gm14669-201ENSMUST00000118841 250 ntBASIC2.3□□□□□ -2.04
SprnQ8BWU1 Gm14566-201ENSMUST00000118915 321 ntBASIC2.3□□□□□ -2.04
SprnQ8BWU1 Gm14627-201ENSMUST00000118931 567 ntBASIC2.3□□□□□ -2.04
SprnQ8BWU1 Gm3788-201ENSMUST00000119949 136 ntBASIC2.3□□□□□ -2.04
SprnQ8BWU1 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC2.3□□□□□ -2.04
SprnQ8BWU1 Gm12748-201ENSMUST00000120763 504 ntBASIC2.3□□□□□ -2.04
SprnQ8BWU1 Gm11358-201ENSMUST00000122310 373 ntBASIC2.3□□□□□ -2.04
SprnQ8BWU1 Gm25270-201ENSMUST00000122606 138 ntBASIC2.3□□□□□ -2.04
SprnQ8BWU1 Gm23885-201ENSMUST00000122682 294 ntBASIC2.3□□□□□ -2.04
SprnQ8BWU1 Gm23223-201ENSMUST00000158119 127 ntBASIC2.3□□□□□ -2.04
SprnQ8BWU1 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC2.3□□□□□ -2.04
SprnQ8BWU1 Gm17030-201ENSMUST00000167016 393 ntBASIC2.3□□□□□ -2.04
SprnQ8BWU1 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC2.3□□□□□ -2.04
SprnQ8BWU1 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
SprnQ8BWU1 Gm8676-201ENSMUST00000184206 637 ntBASIC2.3□□□□□ -2.04
SprnQ8BWU1 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC2.3□□□□□ -2.04
SprnQ8BWU1 Gm38075-201ENSMUST00000191979 920 ntBASIC2.3□□□□□ -2.04
SprnQ8BWU1 Gm37817-201ENSMUST00000195276 434 ntBASIC2.3□□□□□ -2.04
SprnQ8BWU1 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC2.3□□□□□ -2.04
SprnQ8BWU1 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC2.3□□□□□ -2.04
SprnQ8BWU1 Gm45427-201ENSMUST00000209572 1253 ntBASIC2.3□□□□□ -2.04
SprnQ8BWU1 Gm45678-201ENSMUST00000210509 295 ntBASIC2.3□□□□□ -2.04
SprnQ8BWU1 Gm18346-201ENSMUST00000216782 325 ntBASIC2.3□□□□□ -2.04
SprnQ8BWU1 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.3□□□□□ -2.04
SprnQ8BWU1 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC2.3□□□□□ -2.04
SprnQ8BWU1 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC2.3□□□□□ -2.04
SprnQ8BWU1 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC2.3□□□□□ -2.04
SprnQ8BWU1 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.3□□□□□ -2.04
SprnQ8BWU1 AC125523.1-201ENSMUST00000228018 934 ntBASIC2.3□□□□□ -2.04
SprnQ8BWU1 AC154532.2-201ENSMUST00000228947 598 ntBASIC2.3□□□□□ -2.04
SprnQ8BWU1 Gm24611-201ENSMUST00000083272 107 ntBASIC2.3□□□□□ -2.04
SprnQ8BWU1 Gm22970-201ENSMUST00000083304 186 ntBASIC2.3□□□□□ -2.04
SprnQ8BWU1 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SprnQ8BWU1 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SprnQ8BWU1 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.29□□□□□ -2.04
SprnQ8BWU1 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
SprnQ8BWU1 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SprnQ8BWU1 Gm11219-201ENSMUST00000118565 358 ntBASIC2.29□□□□□ -2.04
SprnQ8BWU1 Gm14899-201ENSMUST00000118673 548 ntBASIC2.29□□□□□ -2.04
SprnQ8BWU1 Gm15106-201ENSMUST00000119691 821 ntBASIC2.29□□□□□ -2.04
SprnQ8BWU1 Gm14360-201ENSMUST00000120670 393 ntBASIC2.29□□□□□ -2.04
SprnQ8BWU1 Gm22107-201ENSMUST00000122548 100 ntBASIC2.29□□□□□ -2.04
SprnQ8BWU1 Gm24517-201ENSMUST00000122560 107 ntBASIC2.29□□□□□ -2.04
SprnQ8BWU1 Gm24240-201ENSMUST00000157785 135 ntBASIC2.29□□□□□ -2.04
SprnQ8BWU1 Gm22769-201ENSMUST00000158367 98 ntBASIC2.29□□□□□ -2.04
SprnQ8BWU1 Gm3370-201ENSMUST00000171785 500 ntBASIC2.29□□□□□ -2.04
SprnQ8BWU1 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC2.29□□□□□ -2.04
SprnQ8BWU1 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC2.29□□□□□ -2.04
SprnQ8BWU1 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC2.29□□□□□ -2.04
SprnQ8BWU1 Gm25528-201ENSMUST00000180264 132 ntBASIC2.29□□□□□ -2.04
SprnQ8BWU1 Gm23648-201ENSMUST00000180301 107 ntBASIC2.29□□□□□ -2.04
SprnQ8BWU1 Gm25873-201ENSMUST00000180317 107 ntBASIC2.29□□□□□ -2.04
SprnQ8BWU1 Gm27220-201ENSMUST00000183453 262 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms