Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Gm12238-201ENSMUST00000127764 124 ntBASIC3.71□□□□□ -1.82
Smarca1Q6PGB8 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.71□□□□□ -1.82
Smarca1Q6PGB8 Gm22755-201ENSMUST00000157143 100 ntBASIC3.71□□□□□ -1.82
Smarca1Q6PGB8 Gm26101-201ENSMUST00000157246 105 ntBASIC3.71□□□□□ -1.82
Smarca1Q6PGB8 Gm20698-201ENSMUST00000175657 233 ntBASIC3.71□□□□□ -1.82
Smarca1Q6PGB8 Gm22851-201ENSMUST00000178741 94 ntBASIC3.71□□□□□ -1.82
Smarca1Q6PGB8 Gm25074-201ENSMUST00000178782 94 ntBASIC3.71□□□□□ -1.82
Smarca1Q6PGB8 Gm25361-201ENSMUST00000179358 76 ntBASIC3.71□□□□□ -1.82
Smarca1Q6PGB8 Gm17946-201ENSMUST00000186856 538 ntBASIC3.71□□□□□ -1.82
Smarca1Q6PGB8 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.71□□□□□ -1.82
Smarca1Q6PGB8 Gm31123-201ENSMUST00000192094 666 ntBASIC3.71□□□□□ -1.82
Smarca1Q6PGB8 Ighv3-7-201ENSMUST00000193370 348 ntBASIC3.71□□□□□ -1.82
Smarca1Q6PGB8 Gm43227-201ENSMUST00000202239 677 ntBASIC3.71□□□□□ -1.82
Smarca1Q6PGB8 Gm17906-201ENSMUST00000202480 901 ntBASIC3.71□□□□□ -1.82
Smarca1Q6PGB8 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC3.71□□□□□ -1.82
Smarca1Q6PGB8 Gm45588-201ENSMUST00000211213 630 ntBASIC3.71□□□□□ -1.82
Smarca1Q6PGB8 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Smarca1Q6PGB8 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.71□□□□□ -1.82
Smarca1Q6PGB8 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC3.71□□□□□ -1.82
Smarca1Q6PGB8 AC156790.3-201ENSMUST00000226200 254 ntBASIC3.71□□□□□ -1.82
Smarca1Q6PGB8 AC129208.2-201ENSMUST00000228506 320 ntBASIC3.71□□□□□ -1.82
Smarca1Q6PGB8 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.71□□□□□ -1.82
Smarca1Q6PGB8 Gm10242-201ENSMUST00000090064 330 ntBASIC3.71□□□□□ -1.82
Smarca1Q6PGB8 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.71□□□□□ -1.82
Smarca1Q6PGB8 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Smarca1Q6PGB8 AC137842.3-201ENSMUST00000228855 2397 ntBASIC3.7□□□□□ -1.82
Smarca1Q6PGB8 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Smarca1Q6PGB8 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Smarca1Q6PGB8 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Smarca1Q6PGB8 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Smarca1Q6PGB8 Gm12433-201ENSMUST00000119659 255 ntBASIC3.7□□□□□ -1.82
Smarca1Q6PGB8 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC3.7□□□□□ -1.82
Smarca1Q6PGB8 Gm26100-201ENSMUST00000157245 127 ntBASIC3.7□□□□□ -1.82
Smarca1Q6PGB8 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.7□□□□□ -1.82
Smarca1Q6PGB8 Gm44657-201ENSMUST00000208568 450 ntBASIC3.7□□□□□ -1.82
Smarca1Q6PGB8 Gm39147-201ENSMUST00000211376 465 ntBASIC3.7□□□□□ -1.82
Smarca1Q6PGB8 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC3.7□□□□□ -1.82
Smarca1Q6PGB8 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC3.7□□□□□ -1.82
Smarca1Q6PGB8 AC110380.1-201ENSMUST00000226987 389 ntBASIC3.7□□□□□ -1.82
Smarca1Q6PGB8 AC120553.1-201ENSMUST00000227313 260 ntBASIC3.7□□□□□ -1.82
Smarca1Q6PGB8 CT025525.2-201ENSMUST00000227743 423 ntBASIC3.7□□□□□ -1.82
Smarca1Q6PGB8 AC098719.1-201ENSMUST00000228920 371 ntBASIC3.7□□□□□ -1.82
Smarca1Q6PGB8 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Smarca1Q6PGB8 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Smarca1Q6PGB8 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Smarca1Q6PGB8 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Smarca1Q6PGB8 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Smarca1Q6PGB8 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Smarca1Q6PGB8 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.69□□□□□ -1.82
Smarca1Q6PGB8 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Smarca1Q6PGB8 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.69□□□□□ -1.82
Smarca1Q6PGB8 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC3.69□□□□□ -1.82
Smarca1Q6PGB8 Gm15760-201ENSMUST00000119553 283 ntBASIC3.69□□□□□ -1.82
Smarca1Q6PGB8 Gm11785-201ENSMUST00000120165 601 ntBASIC3.69□□□□□ -1.82
Smarca1Q6PGB8 Gm22956-201ENSMUST00000122520 80 ntBASIC3.69□□□□□ -1.82
Smarca1Q6PGB8 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.69□□□□□ -1.82
Smarca1Q6PGB8 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC3.69□□□□□ -1.82
Smarca1Q6PGB8 Gm20450-201ENSMUST00000173652 147 ntBASIC3.69□□□□□ -1.82
Smarca1Q6PGB8 Gm22910-201ENSMUST00000178568 132 ntBASIC3.69□□□□□ -1.82
Smarca1Q6PGB8 Gm18433-202ENSMUST00000195682 196 ntBASIC3.69□□□□□ -1.82
Smarca1Q6PGB8 Gm43704-201ENSMUST00000196164 496 ntBASIC3.69□□□□□ -1.82
Smarca1Q6PGB8 Gm29848-201ENSMUST00000203107 295 ntBASIC3.69□□□□□ -1.82
Smarca1Q6PGB8 Gm44128-201ENSMUST00000204909 219 ntBASIC3.69□□□□□ -1.82
Smarca1Q6PGB8 Gm44818-201ENSMUST00000206608 358 ntBASIC3.69□□□□□ -1.82
Smarca1Q6PGB8 CT025689.4-201ENSMUST00000225926 601 ntBASIC3.69□□□□□ -1.82
Smarca1Q6PGB8 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Smarca1Q6PGB8 Snora70-201ENSMUST00000083047 137 ntBASIC3.69□□□□□ -1.82
Smarca1Q6PGB8 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Smarca1Q6PGB8 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
Smarca1Q6PGB8 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Smarca1Q6PGB8 Gm17969-201ENSMUST00000185706 2557 ntBASIC3.68□□□□□ -1.82
Smarca1Q6PGB8 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Smarca1Q6PGB8 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.68□□□□□ -1.82
Smarca1Q6PGB8 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Smarca1Q6PGB8 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Smarca1Q6PGB8 Igkv13-87-201ENSMUST00000114214 286 ntBASIC3.68□□□□□ -1.82
Smarca1Q6PGB8 Gm11582-201ENSMUST00000121041 236 ntBASIC3.68□□□□□ -1.82
Smarca1Q6PGB8 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.68□□□□□ -1.82
Smarca1Q6PGB8 Gm8289-201ENSMUST00000144814 1182 ntBASIC3.68□□□□□ -1.82
Smarca1Q6PGB8 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Smarca1Q6PGB8 Gm16354-201ENSMUST00000155376 150 ntBASIC3.68□□□□□ -1.82
Smarca1Q6PGB8 Gm22225-201ENSMUST00000157358 278 ntBASIC3.68□□□□□ -1.82
Smarca1Q6PGB8 Gm24439-201ENSMUST00000157894 117 ntBASIC3.68□□□□□ -1.82
Smarca1Q6PGB8 Gm24901-201ENSMUST00000158125 110 ntBASIC3.68□□□□□ -1.82
Smarca1Q6PGB8 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Smarca1Q6PGB8 Gm27648-201ENSMUST00000184315 107 ntBASIC3.68□□□□□ -1.82
Smarca1Q6PGB8 Mir8106-201ENSMUST00000184520 139 ntBASIC3.68□□□□□ -1.82
Smarca1Q6PGB8 Gm28343-201ENSMUST00000185386 112 ntBASIC3.68□□□□□ -1.82
Smarca1Q6PGB8 Gm37771-201ENSMUST00000193121 265 ntBASIC3.68□□□□□ -1.82
Smarca1Q6PGB8 Gm37869-201ENSMUST00000193385 595 ntBASIC3.68□□□□□ -1.82
Smarca1Q6PGB8 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3.68□□□□□ -1.82
Smarca1Q6PGB8 Gm45814-201ENSMUST00000212646 775 ntBASIC3.68□□□□□ -1.82
Smarca1Q6PGB8 AC112935.1-201ENSMUST00000227603 250 ntBASIC3.68□□□□□ -1.82
Smarca1Q6PGB8 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Smarca1Q6PGB8 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Smarca1Q6PGB8 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Smarca1Q6PGB8 Gm16436-201ENSMUST00000121510 1607 ntBASIC3.68□□□□□ -1.82
Smarca1Q6PGB8 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Smarca1Q6PGB8 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Smarca1Q6PGB8 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 98.2 ms