Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Mir6541-201ENSMUST00000183649 110 ntBASIC3.1□□□□□ -1.91
Herc4Q6PAV2 Mir6916-201ENSMUST00000184514 63 ntBASIC3.1□□□□□ -1.91
Herc4Q6PAV2 Gm28560-201ENSMUST00000186091 315 ntBASIC3.1□□□□□ -1.91
Herc4Q6PAV2 Gm28334-201ENSMUST00000186653 315 ntBASIC3.1□□□□□ -1.91
Herc4Q6PAV2 Gm28495-201ENSMUST00000188452 315 ntBASIC3.1□□□□□ -1.91
Herc4Q6PAV2 Gm28232-201ENSMUST00000188683 315 ntBASIC3.1□□□□□ -1.91
Herc4Q6PAV2 Gm28481-201ENSMUST00000189231 315 ntBASIC3.1□□□□□ -1.91
Herc4Q6PAV2 Gm29059-201ENSMUST00000191534 315 ntBASIC3.1□□□□□ -1.91
Herc4Q6PAV2 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC3.1□□□□□ -1.91
Herc4Q6PAV2 Gm37765-201ENSMUST00000192395 315 ntBASIC3.1□□□□□ -1.91
Herc4Q6PAV2 Gm37237-201ENSMUST00000192893 315 ntBASIC3.1□□□□□ -1.91
Herc4Q6PAV2 Gm36968-201ENSMUST00000193737 315 ntBASIC3.1□□□□□ -1.91
Herc4Q6PAV2 Gm38290-201ENSMUST00000195238 315 ntBASIC3.1□□□□□ -1.91
Herc4Q6PAV2 Gm35212-201ENSMUST00000196672 606 ntBASIC3.1□□□□□ -1.91
Herc4Q6PAV2 Igkv11-114-201ENSMUST00000200013 346 ntBASIC3.1□□□□□ -1.91
Herc4Q6PAV2 Gm42857-201ENSMUST00000200823 339 ntBASIC3.1□□□□□ -1.91
Herc4Q6PAV2 Gm44718-201ENSMUST00000206886 359 ntBASIC3.1□□□□□ -1.91
Herc4Q6PAV2 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC3.1□□□□□ -1.91
Herc4Q6PAV2 Gm9068-201ENSMUST00000217393 455 ntBASIC3.1□□□□□ -1.91
Herc4Q6PAV2 Gm4921-201ENSMUST00000219804 992 ntBASIC3.1□□□□□ -1.91
Herc4Q6PAV2 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.1□□□□□ -1.91
Herc4Q6PAV2 Gm23296-201ENSMUST00000082555 107 ntBASIC3.1□□□□□ -1.91
Herc4Q6PAV2 Gm24859-201ENSMUST00000082729 107 ntBASIC3.1□□□□□ -1.91
Herc4Q6PAV2 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Herc4Q6PAV2 AC124561.2-201ENSMUST00000226657 1973 ntBASIC3.09□□□□□ -1.91
Herc4Q6PAV2 Gm45104-201ENSMUST00000208748 4350 ntBASIC3.09□□□□□ -1.91
Herc4Q6PAV2 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Herc4Q6PAV2 Gm14981-201ENSMUST00000117325 943 ntBASIC3.09□□□□□ -1.91
Herc4Q6PAV2 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
Herc4Q6PAV2 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC3.09□□□□□ -1.91
Herc4Q6PAV2 Gm11414-201ENSMUST00000121795 263 ntBASIC3.09□□□□□ -1.91
Herc4Q6PAV2 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
Herc4Q6PAV2 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC3.09□□□□□ -1.91
Herc4Q6PAV2 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC3.09□□□□□ -1.91
Herc4Q6PAV2 Gm25373-201ENSMUST00000158156 115 ntBASIC3.09□□□□□ -1.91
Herc4Q6PAV2 Gm25194-201ENSMUST00000177987 79 ntBASIC3.09□□□□□ -1.91
Herc4Q6PAV2 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Herc4Q6PAV2 Mir7014-201ENSMUST00000183853 63 ntBASIC3.09□□□□□ -1.91
Herc4Q6PAV2 Gm27163-201ENSMUST00000184767 409 ntBASIC3.09□□□□□ -1.91
Herc4Q6PAV2 Gm28282-201ENSMUST00000186072 186 ntBASIC3.09□□□□□ -1.91
Herc4Q6PAV2 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Herc4Q6PAV2 Gm38333-201ENSMUST00000193608 604 ntBASIC3.09□□□□□ -1.91
Herc4Q6PAV2 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC3.09□□□□□ -1.91
Herc4Q6PAV2 Gm37523-201ENSMUST00000194901 412 ntBASIC3.09□□□□□ -1.91
Herc4Q6PAV2 Gm43652-201ENSMUST00000196219 675 ntBASIC3.09□□□□□ -1.91
Herc4Q6PAV2 Gm42924-201ENSMUST00000197261 185 ntBASIC3.09□□□□□ -1.91
Herc4Q6PAV2 Gm31230-201ENSMUST00000199725 785 ntBASIC3.09□□□□□ -1.91
Herc4Q6PAV2 Crs-ps-201ENSMUST00000203723 760 ntBASIC3.09□□□□□ -1.91
Herc4Q6PAV2 Gm44135-201ENSMUST00000205221 368 ntBASIC3.09□□□□□ -1.91
Herc4Q6PAV2 Gm17991-201ENSMUST00000208139 297 ntBASIC3.09□□□□□ -1.91
Herc4Q6PAV2 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Herc4Q6PAV2 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
Herc4Q6PAV2 Gm24035-201ENSMUST00000082867 107 ntBASIC3.09□□□□□ -1.91
Herc4Q6PAV2 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Herc4Q6PAV2 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Herc4Q6PAV2 AC162910.1-201ENSMUST00000221219 1723 ntBASIC3.08□□□□□ -1.92
Herc4Q6PAV2 AC125532.1-201ENSMUST00000216210 2334 ntBASIC3.08□□□□□ -1.92
Herc4Q6PAV2 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Herc4Q6PAV2 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Herc4Q6PAV2 Mir669p-2-201ENSMUST00000103868 87 ntBASIC3.08□□□□□ -1.92
Herc4Q6PAV2 Mir669p-1-201ENSMUST00000103884 87 ntBASIC3.08□□□□□ -1.92
Herc4Q6PAV2 Gm14751-201ENSMUST00000117693 222 ntBASIC3.08□□□□□ -1.92
Herc4Q6PAV2 Gm14359-201ENSMUST00000118883 424 ntBASIC3.08□□□□□ -1.92
Herc4Q6PAV2 Gm12044-201ENSMUST00000120335 213 ntBASIC3.08□□□□□ -1.92
Herc4Q6PAV2 Gm14360-201ENSMUST00000120670 393 ntBASIC3.08□□□□□ -1.92
Herc4Q6PAV2 Gm11438-201ENSMUST00000121582 189 ntBASIC3.08□□□□□ -1.92
Herc4Q6PAV2 Gm15466-201ENSMUST00000122299 333 ntBASIC3.08□□□□□ -1.92
Herc4Q6PAV2 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC3.08□□□□□ -1.92
Herc4Q6PAV2 Gm9498-201ENSMUST00000140849 291 ntBASIC3.08□□□□□ -1.92
Herc4Q6PAV2 Gm20450-201ENSMUST00000173652 147 ntBASIC3.08□□□□□ -1.92
Herc4Q6PAV2 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC3.08□□□□□ -1.92
Herc4Q6PAV2 Gm23568-201ENSMUST00000177960 92 ntBASIC3.08□□□□□ -1.92
Herc4Q6PAV2 Gm24829-201ENSMUST00000179245 92 ntBASIC3.08□□□□□ -1.92
Herc4Q6PAV2 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC3.08□□□□□ -1.92
Herc4Q6PAV2 Mir6383-201ENSMUST00000184545 116 ntBASIC3.08□□□□□ -1.92
Herc4Q6PAV2 Gm28113-201ENSMUST00000188280 229 ntBASIC3.08□□□□□ -1.92
Herc4Q6PAV2 Gm28384-201ENSMUST00000189079 463 ntBASIC3.08□□□□□ -1.92
Herc4Q6PAV2 Igkv15-97-201ENSMUST00000197637 339 ntBASIC3.08□□□□□ -1.92
Herc4Q6PAV2 Gm42665-201ENSMUST00000202100 586 ntBASIC3.08□□□□□ -1.92
Herc4Q6PAV2 Gm44282-201ENSMUST00000203199 190 ntBASIC3.08□□□□□ -1.92
Herc4Q6PAV2 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC3.08□□□□□ -1.92
Herc4Q6PAV2 Gm45173-201ENSMUST00000206819 305 ntBASIC3.08□□□□□ -1.92
Herc4Q6PAV2 AC101677.1-201ENSMUST00000218590 158 ntBASIC3.08□□□□□ -1.92
Herc4Q6PAV2 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC3.08□□□□□ -1.92
Herc4Q6PAV2 Gm46994-201ENSMUST00000221523 219 ntBASIC3.08□□□□□ -1.92
Herc4Q6PAV2 Gm5955-201ENSMUST00000222712 219 ntBASIC3.08□□□□□ -1.92
Herc4Q6PAV2 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Herc4Q6PAV2 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Herc4Q6PAV2 Gm43896-201ENSMUST00000203440 2032 ntBASIC3.07□□□□□ -1.92
Herc4Q6PAV2 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Herc4Q6PAV2 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Herc4Q6PAV2 Gm14897-201ENSMUST00000118213 207 ntBASIC3.07□□□□□ -1.92
Herc4Q6PAV2 Gm23118-201ENSMUST00000122657 187 ntBASIC3.07□□□□□ -1.92
Herc4Q6PAV2 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC3.07□□□□□ -1.92
Herc4Q6PAV2 Gm23895-201ENSMUST00000158108 160 ntBASIC3.07□□□□□ -1.92
Herc4Q6PAV2 Gm26215-201ENSMUST00000158584 139 ntBASIC3.07□□□□□ -1.92
Herc4Q6PAV2 Gm17187-201ENSMUST00000164622 410 ntBASIC3.07□□□□□ -1.92
Herc4Q6PAV2 Mir5129-201ENSMUST00000174938 78 ntBASIC3.07□□□□□ -1.92
Herc4Q6PAV2 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC3.07□□□□□ -1.92
Herc4Q6PAV2 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 130.2 ms