Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm45438-201ENSMUST00000210242 564 ntBASIC4.54□□□□□ -1.68
Trim28Q62318 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC4.54□□□□□ -1.68
Trim28Q62318 Gm20102-201ENSMUST00000222445 220 ntBASIC4.54□□□□□ -1.68
Trim28Q62318 AC158982.2-201ENSMUST00000226283 184 ntBASIC4.54□□□□□ -1.68
Trim28Q62318 Gm24533-201ENSMUST00000083138 196 ntBASIC4.54□□□□□ -1.68
Trim28Q62318 Gm22169-201ENSMUST00000083229 107 ntBASIC4.54□□□□□ -1.68
Trim28Q62318 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.54□□□□□ -1.68
Trim28Q62318 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Trim28Q62318 Gm38069-201ENSMUST00000195360 2144 ntBASIC4.54□□□□□ -1.68
Trim28Q62318 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Trim28Q62318 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC4.53□□□□□ -1.68
Trim28Q62318 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Trim28Q62318 Gm24127-201ENSMUST00000104110 130 ntBASIC4.53□□□□□ -1.68
Trim28Q62318 Mir883a-201ENSMUST00000104824 76 ntBASIC4.53□□□□□ -1.68
Trim28Q62318 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Trim28Q62318 Gm14973-201ENSMUST00000117248 255 ntBASIC4.53□□□□□ -1.68
Trim28Q62318 Gm11219-201ENSMUST00000118565 358 ntBASIC4.53□□□□□ -1.68
Trim28Q62318 Gm7429-201ENSMUST00000118664 348 ntBASIC4.53□□□□□ -1.68
Trim28Q62318 Gm13692-201ENSMUST00000120774 371 ntBASIC4.53□□□□□ -1.68
Trim28Q62318 Gm14649-201ENSMUST00000121814 324 ntBASIC4.53□□□□□ -1.68
Trim28Q62318 Gm26020-201ENSMUST00000122729 183 ntBASIC4.53□□□□□ -1.68
Trim28Q62318 Gm23016-201ENSMUST00000158431 62 ntBASIC4.53□□□□□ -1.68
Trim28Q62318 Gm23864-201ENSMUST00000177607 107 ntBASIC4.53□□□□□ -1.68
Trim28Q62318 Gm27699-201ENSMUST00000183553 180 ntBASIC4.53□□□□□ -1.68
Trim28Q62318 Gm27161-201ENSMUST00000183960 562 ntBASIC4.53□□□□□ -1.68
Trim28Q62318 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC4.53□□□□□ -1.68
Trim28Q62318 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC4.53□□□□□ -1.68
Trim28Q62318 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC4.53□□□□□ -1.68
Trim28Q62318 Gm43217-201ENSMUST00000199513 367 ntBASIC4.53□□□□□ -1.68
Trim28Q62318 Gm5551-201ENSMUST00000199720 690 ntBASIC4.53□□□□□ -1.68
Trim28Q62318 Gm42475-201ENSMUST00000201212 295 ntBASIC4.53□□□□□ -1.68
Trim28Q62318 Gm35876-201ENSMUST00000205044 459 ntBASIC4.53□□□□□ -1.68
Trim28Q62318 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC4.53□□□□□ -1.68
Trim28Q62318 Gm31849-201ENSMUST00000220306 375 ntBASIC4.53□□□□□ -1.68
Trim28Q62318 AC167669.1-201ENSMUST00000224932 384 ntBASIC4.53□□□□□ -1.68
Trim28Q62318 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trim28Q62318 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trim28Q62318 Gm22829-201ENSMUST00000083771 106 ntBASIC4.53□□□□□ -1.68
Trim28Q62318 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Trim28Q62318 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trim28Q62318 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Trim28Q62318 Gm8744-201ENSMUST00000204475 3581 ntBASIC4.53□□□□□ -1.68
Trim28Q62318 AC135119.1-201ENSMUST00000227935 3717 ntBASIC4.52□□□□□ -1.69
Trim28Q62318 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Trim28Q62318 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Trim28Q62318 Gm42888-201ENSMUST00000202425 4361 ntBASIC4.52□□□□□ -1.69
Trim28Q62318 AC121844.2-201ENSMUST00000219067 2066 ntBASIC4.52□□□□□ -1.69
Trim28Q62318 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4.52□□□□□ -1.69
Trim28Q62318 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Trim28Q62318 Gm24118-201ENSMUST00000103972 126 ntBASIC4.52□□□□□ -1.69
Trim28Q62318 Gm24376-201ENSMUST00000104399 127 ntBASIC4.52□□□□□ -1.69
Trim28Q62318 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Trim28Q62318 Gm6274-201ENSMUST00000118173 797 ntBASIC4.52□□□□□ -1.69
Trim28Q62318 Gm14292-201ENSMUST00000118761 456 ntBASIC4.52□□□□□ -1.69
Trim28Q62318 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Trim28Q62318 Gm6565-201ENSMUST00000121217 438 ntBASIC4.52□□□□□ -1.69
Trim28Q62318 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC4.52□□□□□ -1.69
Trim28Q62318 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC4.52□□□□□ -1.69
Trim28Q62318 Gm26100-201ENSMUST00000157245 127 ntBASIC4.52□□□□□ -1.69
Trim28Q62318 Gm24499-201ENSMUST00000158446 104 ntBASIC4.52□□□□□ -1.69
Trim28Q62318 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Trim28Q62318 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC4.52□□□□□ -1.69
Trim28Q62318 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Trim28Q62318 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Trim28Q62318 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC4.52□□□□□ -1.69
Trim28Q62318 Gm27445-201ENSMUST00000184484 72 ntBASIC4.52□□□□□ -1.69
Trim28Q62318 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC4.52□□□□□ -1.69
Trim28Q62318 Gm28920-201ENSMUST00000189957 699 ntBASIC4.52□□□□□ -1.69
Trim28Q62318 Gm36984-201ENSMUST00000192770 235 ntBASIC4.52□□□□□ -1.69
Trim28Q62318 Gm43355-201ENSMUST00000196541 346 ntBASIC4.52□□□□□ -1.69
Trim28Q62318 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC4.52□□□□□ -1.69
Trim28Q62318 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Trim28Q62318 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
Trim28Q62318 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC4.52□□□□□ -1.69
Trim28Q62318 AC122341.1-201ENSMUST00000227291 560 ntBASIC4.52□□□□□ -1.69
Trim28Q62318 Gm25579-201ENSMUST00000083407 106 ntBASIC4.52□□□□□ -1.69
Trim28Q62318 Mir193a-201ENSMUST00000083461 66 ntBASIC4.52□□□□□ -1.69
Trim28Q62318 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Trim28Q62318 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Trim28Q62318 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Trim28Q62318 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC4.51□□□□□ -1.69
Trim28Q62318 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Trim28Q62318 Gm25325-201ENSMUST00000122559 86 ntBASIC4.51□□□□□ -1.69
Trim28Q62318 Gm23206-201ENSMUST00000122720 184 ntBASIC4.51□□□□□ -1.69
Trim28Q62318 Gm23592-201ENSMUST00000157859 117 ntBASIC4.51□□□□□ -1.69
Trim28Q62318 Gm22085-201ENSMUST00000158344 110 ntBASIC4.51□□□□□ -1.69
Trim28Q62318 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC4.51□□□□□ -1.69
Trim28Q62318 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Trim28Q62318 Gm24819-201ENSMUST00000175094 166 ntBASIC4.51□□□□□ -1.69
Trim28Q62318 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Trim28Q62318 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Trim28Q62318 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Trim28Q62318 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Trim28Q62318 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Trim28Q62318 Gm2092-201ENSMUST00000178887 639 ntBASIC4.51□□□□□ -1.69
Trim28Q62318 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Trim28Q62318 Gm2759-201ENSMUST00000179938 639 ntBASIC4.51□□□□□ -1.69
Trim28Q62318 Mir7578-201ENSMUST00000183455 82 ntBASIC4.51□□□□□ -1.69
Trim28Q62318 Npn2-202ENSMUST00000189275 235 ntBASIC4.51□□□□□ -1.69
Trim28Q62318 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC4.51□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 97.2 ms