Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.06□□□□□ -2.08
Trav3-3Q5R1C3 Mir350-201ENSMUST00000083639 99 ntBASIC2.06□□□□□ -2.08
Trav3-3Q5R1C3 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Trav3-3Q5R1C3 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
Trav3-3Q5R1C3 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Trav3-3Q5R1C3 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Trav3-3Q5R1C3 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Trav3-3Q5R1C3 Gm38382-201ENSMUST00000193790 2499 ntBASIC2.06□□□□□ -2.08
Trav3-3Q5R1C3 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.05□□□□□ -2.08
Trav3-3Q5R1C3 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
Trav3-3Q5R1C3 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
Trav3-3Q5R1C3 Gm6274-201ENSMUST00000118173 797 ntBASIC2.05□□□□□ -2.08
Trav3-3Q5R1C3 Gm15466-201ENSMUST00000122299 333 ntBASIC2.05□□□□□ -2.08
Trav3-3Q5R1C3 n-R5s179-201ENSMUST00000122564 118 ntBASIC2.05□□□□□ -2.08
Trav3-3Q5R1C3 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Trav3-3Q5R1C3 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
Trav3-3Q5R1C3 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC2.05□□□□□ -2.08
Trav3-3Q5R1C3 Gm24008-201ENSMUST00000157733 138 ntBASIC2.05□□□□□ -2.08
Trav3-3Q5R1C3 Gm22651-201ENSMUST00000157872 94 ntBASIC2.05□□□□□ -2.08
Trav3-3Q5R1C3 Gm23223-201ENSMUST00000158119 127 ntBASIC2.05□□□□□ -2.08
Trav3-3Q5R1C3 Gm24730-201ENSMUST00000158228 117 ntBASIC2.05□□□□□ -2.08
Trav3-3Q5R1C3 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.05□□□□□ -2.08
Trav3-3Q5R1C3 Gm22131-201ENSMUST00000178415 94 ntBASIC2.05□□□□□ -2.08
Trav3-3Q5R1C3 Gm26177-201ENSMUST00000178683 107 ntBASIC2.05□□□□□ -2.08
Trav3-3Q5R1C3 Gm21726-201ENSMUST00000179654 392 ntBASIC2.05□□□□□ -2.08
Trav3-3Q5R1C3 Gm25873-201ENSMUST00000180317 107 ntBASIC2.05□□□□□ -2.08
Trav3-3Q5R1C3 Gm29263-201ENSMUST00000188718 463 ntBASIC2.05□□□□□ -2.08
Trav3-3Q5R1C3 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Trav3-3Q5R1C3 Gm28384-201ENSMUST00000189079 463 ntBASIC2.05□□□□□ -2.08
Trav3-3Q5R1C3 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC2.05□□□□□ -2.08
Trav3-3Q5R1C3 Gm35570-201ENSMUST00000198730 681 ntBASIC2.05□□□□□ -2.08
Trav3-3Q5R1C3 Gm44084-201ENSMUST00000203947 409 ntBASIC2.05□□□□□ -2.08
Trav3-3Q5R1C3 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC2.05□□□□□ -2.08
Trav3-3Q5R1C3 AC155923.1-201ENSMUST00000215676 356 ntBASIC2.05□□□□□ -2.08
Trav3-3Q5R1C3 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Trav3-3Q5R1C3 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC2.05□□□□□ -2.08
Trav3-3Q5R1C3 AC153924.1-201ENSMUST00000220117 312 ntBASIC2.05□□□□□ -2.08
Trav3-3Q5R1C3 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC2.05□□□□□ -2.08
Trav3-3Q5R1C3 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Trav3-3Q5R1C3 AC161758.1-201ENSMUST00000226123 310 ntBASIC2.05□□□□□ -2.08
Trav3-3Q5R1C3 AC150560.3-201ENSMUST00000227442 455 ntBASIC2.05□□□□□ -2.08
Trav3-3Q5R1C3 CT030238.4-201ENSMUST00000228579 801 ntBASIC2.05□□□□□ -2.08
Trav3-3Q5R1C3 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
Trav3-3Q5R1C3 Gm24610-201ENSMUST00000083270 109 ntBASIC2.05□□□□□ -2.08
Trav3-3Q5R1C3 Gm25755-201ENSMUST00000083396 107 ntBASIC2.05□□□□□ -2.08
Trav3-3Q5R1C3 Gm23733-201ENSMUST00000083750 106 ntBASIC2.05□□□□□ -2.08
Trav3-3Q5R1C3 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
Trav3-3Q5R1C3 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Trav3-3Q5R1C3 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Trav3-3Q5R1C3 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Trav3-3Q5R1C3 Gm25727-201ENSMUST00000104522 131 ntBASIC2.04□□□□□ -2.08
Trav3-3Q5R1C3 Gm13343-201ENSMUST00000116474 105 ntBASIC2.04□□□□□ -2.08
Trav3-3Q5R1C3 Gm6954-201ENSMUST00000117416 225 ntBASIC2.04□□□□□ -2.08
Trav3-3Q5R1C3 Gm11813-201ENSMUST00000118586 291 ntBASIC2.04□□□□□ -2.08
Trav3-3Q5R1C3 Gm12513-201ENSMUST00000118617 352 ntBASIC2.04□□□□□ -2.08
Trav3-3Q5R1C3 Gm15760-201ENSMUST00000119553 283 ntBASIC2.04□□□□□ -2.08
Trav3-3Q5R1C3 Gm13482-201ENSMUST00000119842 254 ntBASIC2.04□□□□□ -2.08
Trav3-3Q5R1C3 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Trav3-3Q5R1C3 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC2.04□□□□□ -2.08
Trav3-3Q5R1C3 Gm25621-201ENSMUST00000157223 114 ntBASIC2.04□□□□□ -2.08
Trav3-3Q5R1C3 Gm25667-201ENSMUST00000157701 275 ntBASIC2.04□□□□□ -2.08
Trav3-3Q5R1C3 Gm22187-201ENSMUST00000157819 129 ntBASIC2.04□□□□□ -2.08
Trav3-3Q5R1C3 Gm17063-201ENSMUST00000168135 456 ntBASIC2.04□□□□□ -2.08
Trav3-3Q5R1C3 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.04□□□□□ -2.08
Trav3-3Q5R1C3 Gm20718-201ENSMUST00000176058 259 ntBASIC2.04□□□□□ -2.08
Trav3-3Q5R1C3 Mir5123-201ENSMUST00000177794 83 ntBASIC2.04□□□□□ -2.08
Trav3-3Q5R1C3 Gm23648-201ENSMUST00000180301 107 ntBASIC2.04□□□□□ -2.08
Trav3-3Q5R1C3 Gm17929-201ENSMUST00000186851 627 ntBASIC2.04□□□□□ -2.08
Trav3-3Q5R1C3 Gm37085-201ENSMUST00000193780 196 ntBASIC2.04□□□□□ -2.08
Trav3-3Q5R1C3 Mir7232-201ENSMUST00000197929 74 ntBASIC2.04□□□□□ -2.08
Trav3-3Q5R1C3 Gm44964-201ENSMUST00000207011 273 ntBASIC2.04□□□□□ -2.08
Trav3-3Q5R1C3 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Trav3-3Q5R1C3 AL669916.3-201ENSMUST00000213855 94 ntBASIC2.04□□□□□ -2.08
Trav3-3Q5R1C3 AL669916.6-201ENSMUST00000214610 94 ntBASIC2.04□□□□□ -2.08
Trav3-3Q5R1C3 AL669916.4-201ENSMUST00000215976 94 ntBASIC2.04□□□□□ -2.08
Trav3-3Q5R1C3 AL669916.1-201ENSMUST00000217640 94 ntBASIC2.04□□□□□ -2.08
Trav3-3Q5R1C3 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
Trav3-3Q5R1C3 CT030705.1-201ENSMUST00000223971 533 ntBASIC2.04□□□□□ -2.08
Trav3-3Q5R1C3 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Trav3-3Q5R1C3 Gm26206-201ENSMUST00000082908 110 ntBASIC2.04□□□□□ -2.08
Trav3-3Q5R1C3 Gm23506-201ENSMUST00000083077 107 ntBASIC2.04□□□□□ -2.08
Trav3-3Q5R1C3 Gm24533-201ENSMUST00000083138 196 ntBASIC2.04□□□□□ -2.08
Trav3-3Q5R1C3 Gm23264-201ENSMUST00000083372 107 ntBASIC2.04□□□□□ -2.08
Trav3-3Q5R1C3 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.04□□□□□ -2.08
Trav3-3Q5R1C3 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Trav3-3Q5R1C3 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Trav3-3Q5R1C3 Gm43665-201ENSMUST00000198672 1659 ntBASIC2.03□□□□□ -2.08
Trav3-3Q5R1C3 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Trav3-3Q5R1C3 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC2.03□□□□□ -2.08
Trav3-3Q5R1C3 Gm11784-201ENSMUST00000118568 474 ntBASIC2.03□□□□□ -2.08
Trav3-3Q5R1C3 Gm15177-201ENSMUST00000120491 577 ntBASIC2.03□□□□□ -2.08
Trav3-3Q5R1C3 Mup-ps20-201ENSMUST00000121132 389 ntBASIC2.03□□□□□ -2.08
Trav3-3Q5R1C3 Defa-ps5-201ENSMUST00000121541 279 ntBASIC2.03□□□□□ -2.08
Trav3-3Q5R1C3 Gm12045-201ENSMUST00000122122 573 ntBASIC2.03□□□□□ -2.08
Trav3-3Q5R1C3 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Trav3-3Q5R1C3 Gm23137-201ENSMUST00000157559 107 ntBASIC2.03□□□□□ -2.08
Trav3-3Q5R1C3 Gm15900-201ENSMUST00000161584 342 ntBASIC2.03□□□□□ -2.08
Trav3-3Q5R1C3 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC2.03□□□□□ -2.08
Trav3-3Q5R1C3 Gm27773-201ENSMUST00000184087 78 ntBASIC2.03□□□□□ -2.08
Trav3-3Q5R1C3 Mir6363-201ENSMUST00000184880 114 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms