Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.52□□□□□ -1.85
Col28a1Q2UY11 Gm38073-201ENSMUST00000195141 3665 ntBASIC3.52□□□□□ -1.85
Col28a1Q2UY11 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Col28a1Q2UY11 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Col28a1Q2UY11 Gm24127-201ENSMUST00000104110 130 ntBASIC3.52□□□□□ -1.85
Col28a1Q2UY11 Gm12765-201ENSMUST00000117273 615 ntBASIC3.52□□□□□ -1.85
Col28a1Q2UY11 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.52□□□□□ -1.85
Col28a1Q2UY11 Gm11403-201ENSMUST00000122195 369 ntBASIC3.52□□□□□ -1.85
Col28a1Q2UY11 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.52□□□□□ -1.85
Col28a1Q2UY11 Gm22085-201ENSMUST00000158344 110 ntBASIC3.52□□□□□ -1.85
Col28a1Q2UY11 Gm23702-201ENSMUST00000158840 130 ntBASIC3.52□□□□□ -1.85
Col28a1Q2UY11 Gm7925-201ENSMUST00000166690 401 ntBASIC3.52□□□□□ -1.85
Col28a1Q2UY11 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC3.52□□□□□ -1.85
Col28a1Q2UY11 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Col28a1Q2UY11 Mir6481-201ENSMUST00000184617 110 ntBASIC3.52□□□□□ -1.85
Col28a1Q2UY11 Gm28598-201ENSMUST00000186490 615 ntBASIC3.52□□□□□ -1.85
Col28a1Q2UY11 Gm29045-201ENSMUST00000187278 698 ntBASIC3.52□□□□□ -1.85
Col28a1Q2UY11 Gm29268-201ENSMUST00000188669 615 ntBASIC3.52□□□□□ -1.85
Col28a1Q2UY11 Gm28506-201ENSMUST00000189937 150 ntBASIC3.52□□□□□ -1.85
Col28a1Q2UY11 Gm29218-205ENSMUST00000190846 615 ntBASIC3.52□□□□□ -1.85
Col28a1Q2UY11 Gm28978-201ENSMUST00000191120 615 ntBASIC3.52□□□□□ -1.85
Col28a1Q2UY11 Gm37172-201ENSMUST00000191926 615 ntBASIC3.52□□□□□ -1.85
Col28a1Q2UY11 Gm36891-201ENSMUST00000191995 655 ntBASIC3.52□□□□□ -1.85
Col28a1Q2UY11 Gm37239-201ENSMUST00000193510 141 ntBASIC3.52□□□□□ -1.85
Col28a1Q2UY11 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC3.52□□□□□ -1.85
Col28a1Q2UY11 Mir3970-201ENSMUST00000199287 90 ntBASIC3.52□□□□□ -1.85
Col28a1Q2UY11 Gm43039-201ENSMUST00000202883 963 ntBASIC3.52□□□□□ -1.85
Col28a1Q2UY11 Gm44099-201ENSMUST00000203299 112 ntBASIC3.52□□□□□ -1.85
Col28a1Q2UY11 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Col28a1Q2UY11 AC125531.1-201ENSMUST00000219849 221 ntBASIC3.52□□□□□ -1.85
Col28a1Q2UY11 AC166358.7-201ENSMUST00000221132 108 ntBASIC3.52□□□□□ -1.85
Col28a1Q2UY11 AC125543.5-201ENSMUST00000222799 108 ntBASIC3.52□□□□□ -1.85
Col28a1Q2UY11 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Col28a1Q2UY11 Gm25481-201ENSMUST00000083221 158 ntBASIC3.52□□□□□ -1.85
Col28a1Q2UY11 Gm23460-201ENSMUST00000083258 109 ntBASIC3.52□□□□□ -1.85
Col28a1Q2UY11 Gm25008-201ENSMUST00000083809 81 ntBASIC3.52□□□□□ -1.85
Col28a1Q2UY11 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Col28a1Q2UY11 Gm18913-201ENSMUST00000204311 1789 ntBASIC3.52□□□□□ -1.85
Col28a1Q2UY11 Gm37064-201ENSMUST00000193851 2231 ntBASIC3.52□□□□□ -1.85
Col28a1Q2UY11 AC101945.4-201ENSMUST00000228464 1976 ntBASIC3.52□□□□□ -1.85
Col28a1Q2UY11 Gm45033-201ENSMUST00000206710 3167 ntBASIC3.52□□□□□ -1.85
Col28a1Q2UY11 Gm43320-201ENSMUST00000196047 2916 ntBASIC3.52□□□□□ -1.85
Col28a1Q2UY11 Gm44679-201ENSMUST00000207202 2908 ntBASIC3.52□□□□□ -1.85
Col28a1Q2UY11 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
Col28a1Q2UY11 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.52□□□□□ -1.85
Col28a1Q2UY11 AC125532.1-201ENSMUST00000216210 2334 ntBASIC3.52□□□□□ -1.85
Col28a1Q2UY11 AC147615.2-201ENSMUST00000219876 2154 ntBASIC3.51□□□□□ -1.85
Col28a1Q2UY11 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.51□□□□□ -1.85
Col28a1Q2UY11 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.51□□□□□ -1.85
Col28a1Q2UY11 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Col28a1Q2UY11 Gm14669-201ENSMUST00000118841 250 ntBASIC3.51□□□□□ -1.85
Col28a1Q2UY11 Gm14359-201ENSMUST00000118883 424 ntBASIC3.51□□□□□ -1.85
Col28a1Q2UY11 Gm14687-201ENSMUST00000120206 363 ntBASIC3.51□□□□□ -1.85
Col28a1Q2UY11 Gm14980-201ENSMUST00000121247 736 ntBASIC3.51□□□□□ -1.85
Col28a1Q2UY11 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC3.51□□□□□ -1.85
Col28a1Q2UY11 Gm25325-201ENSMUST00000122559 86 ntBASIC3.51□□□□□ -1.85
Col28a1Q2UY11 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.51□□□□□ -1.85
Col28a1Q2UY11 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC3.51□□□□□ -1.85
Col28a1Q2UY11 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC3.51□□□□□ -1.85
Col28a1Q2UY11 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Col28a1Q2UY11 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Col28a1Q2UY11 Gm23860-201ENSMUST00000179446 132 ntBASIC3.51□□□□□ -1.85
Col28a1Q2UY11 Gm26746-201ENSMUST00000181722 487 ntBASIC3.51□□□□□ -1.85
Col28a1Q2UY11 Gm27028-201ENSMUST00000182303 399 ntBASIC3.51□□□□□ -1.85
Col28a1Q2UY11 Gm27796-201ENSMUST00000183863 261 ntBASIC3.51□□□□□ -1.85
Col28a1Q2UY11 Gm20923-201ENSMUST00000190009 319 ntBASIC3.51□□□□□ -1.85
Col28a1Q2UY11 Gm38098-201ENSMUST00000194115 241 ntBASIC3.51□□□□□ -1.85
Col28a1Q2UY11 Gm43355-201ENSMUST00000196541 346 ntBASIC3.51□□□□□ -1.85
Col28a1Q2UY11 Gm19243-201ENSMUST00000198592 269 ntBASIC3.51□□□□□ -1.85
Col28a1Q2UY11 Gm45367-201ENSMUST00000210171 347 ntBASIC3.51□□□□□ -1.85
Col28a1Q2UY11 AC093926.1-201ENSMUST00000213730 243 ntBASIC3.51□□□□□ -1.85
Col28a1Q2UY11 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Col28a1Q2UY11 Gm18116-201ENSMUST00000220920 537 ntBASIC3.51□□□□□ -1.85
Col28a1Q2UY11 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC3.51□□□□□ -1.85
Col28a1Q2UY11 AC126275.2-201ENSMUST00000225224 253 ntBASIC3.51□□□□□ -1.85
Col28a1Q2UY11 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Col28a1Q2UY11 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Col28a1Q2UY11 Gm23925-201ENSMUST00000082471 132 ntBASIC3.51□□□□□ -1.85
Col28a1Q2UY11 Gm23736-201ENSMUST00000082553 75 ntBASIC3.51□□□□□ -1.85
Col28a1Q2UY11 Gm23447-201ENSMUST00000082798 163 ntBASIC3.51□□□□□ -1.85
Col28a1Q2UY11 Gm25579-201ENSMUST00000083407 106 ntBASIC3.51□□□□□ -1.85
Col28a1Q2UY11 Olfr895-201ENSMUST00000093864 951 ntBASIC3.51□□□□□ -1.85
Col28a1Q2UY11 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Col28a1Q2UY11 Gm37999-201ENSMUST00000195178 1809 ntBASIC3.51□□□□□ -1.85
Col28a1Q2UY11 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
Col28a1Q2UY11 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Col28a1Q2UY11 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Col28a1Q2UY11 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3.5□□□□□ -1.85
Col28a1Q2UY11 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Col28a1Q2UY11 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Col28a1Q2UY11 Gm23744-201ENSMUST00000104231 149 ntBASIC3.5□□□□□ -1.85
Col28a1Q2UY11 Gm15148-201ENSMUST00000117602 156 ntBASIC3.5□□□□□ -1.85
Col28a1Q2UY11 Gm15268-201ENSMUST00000118845 352 ntBASIC3.5□□□□□ -1.85
Col28a1Q2UY11 Gm23214-201ENSMUST00000122716 157 ntBASIC3.5□□□□□ -1.85
Col28a1Q2UY11 Hba-ps4-201ENSMUST00000128900 447 ntBASIC3.5□□□□□ -1.85
Col28a1Q2UY11 Gm23168-201ENSMUST00000157156 143 ntBASIC3.5□□□□□ -1.85
Col28a1Q2UY11 Gm25339-201ENSMUST00000157458 232 ntBASIC3.5□□□□□ -1.85
Col28a1Q2UY11 Gm25184-201ENSMUST00000157753 163 ntBASIC3.5□□□□□ -1.85
Col28a1Q2UY11 Gm24965-201ENSMUST00000157922 106 ntBASIC3.5□□□□□ -1.85
Col28a1Q2UY11 Gm5263-201ENSMUST00000163646 601 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms