Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
Sox9Q04887 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Sox9Q04887 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Sox9Q04887 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Sox9Q04887 Gm13664-201ENSMUST00000117304 345 ntBASIC4.26□□□□□ -1.73
Sox9Q04887 Gm13672-201ENSMUST00000117554 459 ntBASIC4.26□□□□□ -1.73
Sox9Q04887 Gm11398-201ENSMUST00000120330 320 ntBASIC4.26□□□□□ -1.73
Sox9Q04887 Gm25105-201ENSMUST00000122477 130 ntBASIC4.26□□□□□ -1.73
Sox9Q04887 Gm22378-201ENSMUST00000157481 111 ntBASIC4.26□□□□□ -1.73
Sox9Q04887 Gm23585-201ENSMUST00000157656 102 ntBASIC4.26□□□□□ -1.73
Sox9Q04887 Gm23702-201ENSMUST00000158840 130 ntBASIC4.26□□□□□ -1.73
Sox9Q04887 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Sox9Q04887 Gm23415-201ENSMUST00000175519 83 ntBASIC4.26□□□□□ -1.73
Sox9Q04887 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC4.26□□□□□ -1.73
Sox9Q04887 Gm4761-201ENSMUST00000178086 582 ntBASIC4.26□□□□□ -1.73
Sox9Q04887 Gm27392-201ENSMUST00000185041 101 ntBASIC4.26□□□□□ -1.73
Sox9Q04887 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Sox9Q04887 Gm28717-201ENSMUST00000189950 315 ntBASIC4.26□□□□□ -1.73
Sox9Q04887 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.26□□□□□ -1.73
Sox9Q04887 Gm32381-201ENSMUST00000203192 476 ntBASIC4.26□□□□□ -1.73
Sox9Q04887 Gm44879-201ENSMUST00000207007 503 ntBASIC4.26□□□□□ -1.73
Sox9Q04887 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC4.26□□□□□ -1.73
Sox9Q04887 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC4.26□□□□□ -1.73
Sox9Q04887 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC4.26□□□□□ -1.73
Sox9Q04887 AC135019.1-201ENSMUST00000219949 307 ntBASIC4.26□□□□□ -1.73
Sox9Q04887 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Sox9Q04887 Mir452-201ENSMUST00000093629 85 ntBASIC4.26□□□□□ -1.73
Sox9Q04887 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
Sox9Q04887 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
Sox9Q04887 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Sox9Q04887 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Sox9Q04887 Gm2123-201ENSMUST00000221476 2836 ntBASIC4.26□□□□□ -1.73
Sox9Q04887 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
Sox9Q04887 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
Sox9Q04887 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Sox9Q04887 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.25□□□□□ -1.73
Sox9Q04887 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Sox9Q04887 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC4.25□□□□□ -1.73
Sox9Q04887 Gm13046-201ENSMUST00000117391 501 ntBASIC4.25□□□□□ -1.73
Sox9Q04887 Gm12235-201ENSMUST00000118596 170 ntBASIC4.25□□□□□ -1.73
Sox9Q04887 Gm12876-201ENSMUST00000120975 408 ntBASIC4.25□□□□□ -1.73
Sox9Q04887 Gm14287-201ENSMUST00000121060 117 ntBASIC4.25□□□□□ -1.73
Sox9Q04887 Gm14694-201ENSMUST00000121856 282 ntBASIC4.25□□□□□ -1.73
Sox9Q04887 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC4.25□□□□□ -1.73
Sox9Q04887 Gm23960-201ENSMUST00000157206 131 ntBASIC4.25□□□□□ -1.73
Sox9Q04887 Gm25621-201ENSMUST00000157223 114 ntBASIC4.25□□□□□ -1.73
Sox9Q04887 Gm24008-201ENSMUST00000157733 138 ntBASIC4.25□□□□□ -1.73
Sox9Q04887 Mir6917-201ENSMUST00000184111 61 ntBASIC4.25□□□□□ -1.73
Sox9Q04887 Gm27457-201ENSMUST00000184771 156 ntBASIC4.25□□□□□ -1.73
Sox9Q04887 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC4.25□□□□□ -1.73
Sox9Q04887 Gm20923-201ENSMUST00000190009 319 ntBASIC4.25□□□□□ -1.73
Sox9Q04887 Gm28951-201ENSMUST00000190742 313 ntBASIC4.25□□□□□ -1.73
Sox9Q04887 Gm37081-201ENSMUST00000192034 196 ntBASIC4.25□□□□□ -1.73
Sox9Q04887 Gm44099-201ENSMUST00000203299 112 ntBASIC4.25□□□□□ -1.73
Sox9Q04887 Gm44523-201ENSMUST00000205616 417 ntBASIC4.25□□□□□ -1.73
Sox9Q04887 Gm44824-201ENSMUST00000207021 229 ntBASIC4.25□□□□□ -1.73
Sox9Q04887 Gm44600-201ENSMUST00000208540 111 ntBASIC4.25□□□□□ -1.73
Sox9Q04887 Gm45420-201ENSMUST00000211243 425 ntBASIC4.25□□□□□ -1.73
Sox9Q04887 Gm45327-201ENSMUST00000211612 565 ntBASIC4.25□□□□□ -1.73
Sox9Q04887 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC4.25□□□□□ -1.73
Sox9Q04887 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.25□□□□□ -1.73
Sox9Q04887 Gm3829-201ENSMUST00000222362 619 ntBASIC4.25□□□□□ -1.73
Sox9Q04887 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
Sox9Q04887 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Sox9Q04887 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.25□□□□□ -1.73
Sox9Q04887 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Sox9Q04887 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Sox9Q04887 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.25□□□□□ -1.73
Sox9Q04887 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Sox9Q04887 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Sox9Q04887 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.25□□□□□ -1.73
Sox9Q04887 AC124572.2-201ENSMUST00000218041 5152 ntBASIC4.25□□□□□ -1.73
Sox9Q04887 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Sox9Q04887 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Sox9Q04887 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Sox9Q04887 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Sox9Q04887 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Sox9Q04887 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Sox9Q04887 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
Sox9Q04887 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC4.24□□□□□ -1.73
Sox9Q04887 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Sox9Q04887 Mir673-201ENSMUST00000102361 91 ntBASIC4.24□□□□□ -1.73
Sox9Q04887 Gm11432-201ENSMUST00000117334 231 ntBASIC4.24□□□□□ -1.73
Sox9Q04887 Gm14657-201ENSMUST00000117461 302 ntBASIC4.24□□□□□ -1.73
Sox9Q04887 Gm13076-201ENSMUST00000118041 204 ntBASIC4.24□□□□□ -1.73
Sox9Q04887 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC4.24□□□□□ -1.73
Sox9Q04887 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC4.24□□□□□ -1.73
Sox9Q04887 Mir7676-1-201ENSMUST00000183491 62 ntBASIC4.24□□□□□ -1.73
Sox9Q04887 Mir7676-2-201ENSMUST00000183523 62 ntBASIC4.24□□□□□ -1.73
Sox9Q04887 Gm6059-201ENSMUST00000196903 340 ntBASIC4.24□□□□□ -1.73
Sox9Q04887 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.24□□□□□ -1.73
Sox9Q04887 Gm44083-201ENSMUST00000203114 337 ntBASIC4.24□□□□□ -1.73
Sox9Q04887 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC4.24□□□□□ -1.73
Sox9Q04887 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC4.24□□□□□ -1.73
Sox9Q04887 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC4.24□□□□□ -1.73
Sox9Q04887 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Sox9Q04887 Gm8074-201ENSMUST00000095071 252 ntBASIC4.24□□□□□ -1.73
Sox9Q04887 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Sox9Q04887 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Sox9Q04887 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms