Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm23496-201ENSMUST00000157741 248 ntBASIC4.77□□□□□ -1.65
Col6a1Q04857 Gm24636-201ENSMUST00000158673 288 ntBASIC4.77□□□□□ -1.65
Col6a1Q04857 Gm24664-201ENSMUST00000158939 100 ntBASIC4.77□□□□□ -1.65
Col6a1Q04857 Gm27997-201ENSMUST00000184942 69 ntBASIC4.77□□□□□ -1.65
Col6a1Q04857 Gm43855-201ENSMUST00000197462 507 ntBASIC4.77□□□□□ -1.65
Col6a1Q04857 Igkv13-64-201ENSMUST00000198143 343 ntBASIC4.77□□□□□ -1.65
Col6a1Q04857 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.77□□□□□ -1.65
Col6a1Q04857 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a1Q04857 Gm20039-201ENSMUST00000210329 394 ntBASIC4.77□□□□□ -1.65
Col6a1Q04857 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.77□□□□□ -1.65
Col6a1Q04857 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
Col6a1Q04857 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Col6a1Q04857 n-R5s50-201ENSMUST00000083168 111 ntBASIC4.77□□□□□ -1.65
Col6a1Q04857 Gm23741-201ENSMUST00000097237 171 ntBASIC4.77□□□□□ -1.65
Col6a1Q04857 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Col6a1Q04857 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
Col6a1Q04857 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Col6a1Q04857 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.77□□□□□ -1.65
Col6a1Q04857 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
Col6a1Q04857 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Col6a1Q04857 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a1Q04857 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a1Q04857 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Col6a1Q04857 Gm37814-201ENSMUST00000195820 3644 ntBASIC4.76□□□□□ -1.65
Col6a1Q04857 Gm43327-201ENSMUST00000199285 4055 ntBASIC4.76□□□□□ -1.65
Col6a1Q04857 Gm16332-201ENSMUST00000134229 2967 ntBASIC4.76□□□□□ -1.65
Col6a1Q04857 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col6a1Q04857 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Col6a1Q04857 Gm12062-201ENSMUST00000117533 259 ntBASIC4.76□□□□□ -1.65
Col6a1Q04857 Gm15553-201ENSMUST00000118757 430 ntBASIC4.76□□□□□ -1.65
Col6a1Q04857 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
Col6a1Q04857 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC4.76□□□□□ -1.65
Col6a1Q04857 Gm24876-201ENSMUST00000158780 92 ntBASIC4.76□□□□□ -1.65
Col6a1Q04857 Gm17119-201ENSMUST00000163943 280 ntBASIC4.76□□□□□ -1.65
Col6a1Q04857 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC4.76□□□□□ -1.65
Col6a1Q04857 Mir6408-201ENSMUST00000183643 91 ntBASIC4.76□□□□□ -1.65
Col6a1Q04857 Gm28598-201ENSMUST00000186490 615 ntBASIC4.76□□□□□ -1.65
Col6a1Q04857 Gm29268-201ENSMUST00000188669 615 ntBASIC4.76□□□□□ -1.65
Col6a1Q04857 Gm29218-205ENSMUST00000190846 615 ntBASIC4.76□□□□□ -1.65
Col6a1Q04857 Gm28267-201ENSMUST00000191093 265 ntBASIC4.76□□□□□ -1.65
Col6a1Q04857 Gm28978-201ENSMUST00000191120 615 ntBASIC4.76□□□□□ -1.65
Col6a1Q04857 Gm37172-201ENSMUST00000191926 615 ntBASIC4.76□□□□□ -1.65
Col6a1Q04857 Gm43853-201ENSMUST00000197162 301 ntBASIC4.76□□□□□ -1.65
Col6a1Q04857 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.76□□□□□ -1.65
Col6a1Q04857 Gm7957-201ENSMUST00000207404 2602 ntBASIC4.76□□□□□ -1.65
Col6a1Q04857 AC124772.1-201ENSMUST00000221325 151 ntBASIC4.76□□□□□ -1.65
Col6a1Q04857 AC130821.1-201ENSMUST00000221997 293 ntBASIC4.76□□□□□ -1.65
Col6a1Q04857 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC4.76□□□□□ -1.65
Col6a1Q04857 AC173482.5-201ENSMUST00000224181 327 ntBASIC4.76□□□□□ -1.65
Col6a1Q04857 AC133598.3-201ENSMUST00000224322 568 ntBASIC4.76□□□□□ -1.65
Col6a1Q04857 AC124729.1-201ENSMUST00000225327 976 ntBASIC4.76□□□□□ -1.65
Col6a1Q04857 Gm5265-201ENSMUST00000076828 342 ntBASIC4.76□□□□□ -1.65
Col6a1Q04857 Gm8074-201ENSMUST00000095071 252 ntBASIC4.76□□□□□ -1.65
Col6a1Q04857 Gm43047-201ENSMUST00000200089 3460 ntBASIC4.76□□□□□ -1.65
Col6a1Q04857 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col6a1Q04857 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Col6a1Q04857 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
Col6a1Q04857 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Col6a1Q04857 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col6a1Q04857 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col6a1Q04857 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a1Q04857 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Col6a1Q04857 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Col6a1Q04857 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a1Q04857 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Col6a1Q04857 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a1Q04857 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Col6a1Q04857 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Col6a1Q04857 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC4.75□□□□□ -1.65
Col6a1Q04857 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC4.75□□□□□ -1.65
Col6a1Q04857 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a1Q04857 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.75□□□□□ -1.65
Col6a1Q04857 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC4.75□□□□□ -1.65
Col6a1Q04857 Gm15807-201ENSMUST00000119880 1128 ntBASIC4.75□□□□□ -1.65
Col6a1Q04857 Gm13967-201ENSMUST00000120404 380 ntBASIC4.75□□□□□ -1.65
Col6a1Q04857 Gm5391-201ENSMUST00000121155 613 ntBASIC4.75□□□□□ -1.65
Col6a1Q04857 Gm5123-201ENSMUST00000121905 837 ntBASIC4.75□□□□□ -1.65
Col6a1Q04857 Gm15986-201ENSMUST00000122153 400 ntBASIC4.75□□□□□ -1.65
Col6a1Q04857 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Col6a1Q04857 Gm5755-201ENSMUST00000152394 837 ntBASIC4.75□□□□□ -1.65
Col6a1Q04857 Gm23829-201ENSMUST00000157392 270 ntBASIC4.75□□□□□ -1.65
Col6a1Q04857 Gm25425-201ENSMUST00000157611 96 ntBASIC4.75□□□□□ -1.65
Col6a1Q04857 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC4.75□□□□□ -1.65
Col6a1Q04857 Gm27928-201ENSMUST00000183747 256 ntBASIC4.75□□□□□ -1.65
Col6a1Q04857 Gm27233-201ENSMUST00000184030 307 ntBASIC4.75□□□□□ -1.65
Col6a1Q04857 Gm29428-201ENSMUST00000190086 409 ntBASIC4.75□□□□□ -1.65
Col6a1Q04857 Gm28288-201ENSMUST00000191019 214 ntBASIC4.75□□□□□ -1.65
Col6a1Q04857 Gm29014-201ENSMUST00000191422 326 ntBASIC4.75□□□□□ -1.65
Col6a1Q04857 Gm38060-201ENSMUST00000194822 464 ntBASIC4.75□□□□□ -1.65
Col6a1Q04857 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a1Q04857 Gm44032-201ENSMUST00000204841 166 ntBASIC4.75□□□□□ -1.65
Col6a1Q04857 Gm18453-201ENSMUST00000208000 626 ntBASIC4.75□□□□□ -1.65
Col6a1Q04857 Gm34779-201ENSMUST00000210036 263 ntBASIC4.75□□□□□ -1.65
Col6a1Q04857 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC4.75□□□□□ -1.65
Col6a1Q04857 AC140477.1-201ENSMUST00000222354 246 ntBASIC4.75□□□□□ -1.65
Col6a1Q04857 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.75□□□□□ -1.65
Col6a1Q04857 Gm18441-201ENSMUST00000223539 617 ntBASIC4.75□□□□□ -1.65
Col6a1Q04857 AC122397.2-201ENSMUST00000227422 686 ntBASIC4.75□□□□□ -1.65
Col6a1Q04857 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a1Q04857 Gm4987-201ENSMUST00000078326 408 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms