Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Gm22886-201ENSMUST00000093714 107 ntBASIC4.24□□□□□ -1.73
Msx2Q03358 Gm22170-201ENSMUST00000097247 107 ntBASIC4.24□□□□□ -1.73
Msx2Q03358 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Msx2Q03358 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Msx2Q03358 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.24□□□□□ -1.73
Msx2Q03358 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Msx2Q03358 Gm44821-201ENSMUST00000208212 2002 ntBASIC4.24□□□□□ -1.73
Msx2Q03358 Gm38260-201ENSMUST00000193573 3995 ntBASIC4.24□□□□□ -1.73
Msx2Q03358 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Msx2Q03358 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Msx2Q03358 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Msx2Q03358 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Msx2Q03358 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Msx2Q03358 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Msx2Q03358 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Msx2Q03358 Gm25096-201ENSMUST00000104043 129 ntBASIC4.23□□□□□ -1.73
Msx2Q03358 Gm16242-201ENSMUST00000117741 334 ntBASIC4.23□□□□□ -1.73
Msx2Q03358 Gm11633-201ENSMUST00000118176 444 ntBASIC4.23□□□□□ -1.73
Msx2Q03358 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC4.23□□□□□ -1.73
Msx2Q03358 Gm13557-201ENSMUST00000120771 382 ntBASIC4.23□□□□□ -1.73
Msx2Q03358 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC4.23□□□□□ -1.73
Msx2Q03358 Gm22145-201ENSMUST00000157396 148 ntBASIC4.23□□□□□ -1.73
Msx2Q03358 Gm23557-201ENSMUST00000157820 138 ntBASIC4.23□□□□□ -1.73
Msx2Q03358 Gm22328-201ENSMUST00000158074 112 ntBASIC4.23□□□□□ -1.73
Msx2Q03358 Mir3062-201ENSMUST00000174986 105 ntBASIC4.23□□□□□ -1.73
Msx2Q03358 Gm5558-201ENSMUST00000178933 495 ntBASIC4.23□□□□□ -1.73
Msx2Q03358 Gm44474-201ENSMUST00000196525 127 ntBASIC4.23□□□□□ -1.73
Msx2Q03358 Gm44473-201ENSMUST00000204039 152 ntBASIC4.23□□□□□ -1.73
Msx2Q03358 Gm45101-201ENSMUST00000208327 232 ntBASIC4.23□□□□□ -1.73
Msx2Q03358 Gm45392-201ENSMUST00000210441 214 ntBASIC4.23□□□□□ -1.73
Msx2Q03358 Gm18016-201ENSMUST00000216119 801 ntBASIC4.23□□□□□ -1.73
Msx2Q03358 AC154452.1-201ENSMUST00000225819 241 ntBASIC4.23□□□□□ -1.73
Msx2Q03358 Gm26121-201ENSMUST00000083364 162 ntBASIC4.23□□□□□ -1.73
Msx2Q03358 Mir134-201ENSMUST00000083492 71 ntBASIC4.23□□□□□ -1.73
Msx2Q03358 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Msx2Q03358 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC4.23□□□□□ -1.73
Msx2Q03358 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.23□□□□□ -1.73
Msx2Q03358 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Msx2Q03358 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.22□□□□□ -1.73
Msx2Q03358 AC135119.1-201ENSMUST00000227935 3717 ntBASIC4.22□□□□□ -1.73
Msx2Q03358 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Msx2Q03358 Gm7853-201ENSMUST00000100708 478 ntBASIC4.22□□□□□ -1.73
Msx2Q03358 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Msx2Q03358 Gm22273-201ENSMUST00000104040 132 ntBASIC4.22□□□□□ -1.73
Msx2Q03358 Gm22498-201ENSMUST00000104497 86 ntBASIC4.22□□□□□ -1.73
Msx2Q03358 Gm13729-201ENSMUST00000120328 406 ntBASIC4.22□□□□□ -1.73
Msx2Q03358 Gm25293-201ENSMUST00000122792 285 ntBASIC4.22□□□□□ -1.73
Msx2Q03358 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC4.22□□□□□ -1.73
Msx2Q03358 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC4.22□□□□□ -1.73
Msx2Q03358 Gm5958-201ENSMUST00000147698 297 ntBASIC4.22□□□□□ -1.73
Msx2Q03358 Gm22337-201ENSMUST00000157721 132 ntBASIC4.22□□□□□ -1.73
Msx2Q03358 Mir3080-201ENSMUST00000175010 79 ntBASIC4.22□□□□□ -1.73
Msx2Q03358 Mir195b-201ENSMUST00000184814 97 ntBASIC4.22□□□□□ -1.73
Msx2Q03358 Gm27608-201ENSMUST00000184822 162 ntBASIC4.22□□□□□ -1.73
Msx2Q03358 Gm20257-202ENSMUST00000188643 130 ntBASIC4.22□□□□□ -1.73
Msx2Q03358 Gm44376-201ENSMUST00000197570 128 ntBASIC4.22□□□□□ -1.73
Msx2Q03358 Gm44391-201ENSMUST00000198490 93 ntBASIC4.22□□□□□ -1.73
Msx2Q03358 Gm25203-202ENSMUST00000200458 216 ntBASIC4.22□□□□□ -1.73
Msx2Q03358 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC4.22□□□□□ -1.73
Msx2Q03358 Gm19908-201ENSMUST00000204684 391 ntBASIC4.22□□□□□ -1.73
Msx2Q03358 Gm35857-201ENSMUST00000212739 178 ntBASIC4.22□□□□□ -1.73
Msx2Q03358 AC159709.1-201ENSMUST00000220445 349 ntBASIC4.22□□□□□ -1.73
Msx2Q03358 AC123860.1-201ENSMUST00000228033 481 ntBASIC4.22□□□□□ -1.73
Msx2Q03358 Gm25203-201ENSMUST00000082842 215 ntBASIC4.22□□□□□ -1.73
Msx2Q03358 Gm7676-201ENSMUST00000084055 319 ntBASIC4.22□□□□□ -1.73
Msx2Q03358 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Msx2Q03358 AC152162.1-201ENSMUST00000225910 2917 ntBASIC4.22□□□□□ -1.73
Msx2Q03358 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Msx2Q03358 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.22□□□□□ -1.73
Msx2Q03358 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Msx2Q03358 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Msx2Q03358 Gm37916-201ENSMUST00000192153 2435 ntBASIC4.22□□□□□ -1.73
Msx2Q03358 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Msx2Q03358 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Msx2Q03358 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Msx2Q03358 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
Msx2Q03358 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Msx2Q03358 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Msx2Q03358 Mir541-201ENSMUST00000102097 90 ntBASIC4.21□□□□□ -1.74
Msx2Q03358 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Msx2Q03358 Gm14971-201ENSMUST00000117980 663 ntBASIC4.21□□□□□ -1.74
Msx2Q03358 Gm13887-201ENSMUST00000119009 344 ntBASIC4.21□□□□□ -1.74
Msx2Q03358 Gm12417-201ENSMUST00000119153 403 ntBASIC4.21□□□□□ -1.74
Msx2Q03358 Gm11894-201ENSMUST00000121579 328 ntBASIC4.21□□□□□ -1.74
Msx2Q03358 Gm13424-201ENSMUST00000122301 354 ntBASIC4.21□□□□□ -1.74
Msx2Q03358 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.21□□□□□ -1.74
Msx2Q03358 Gm24630-201ENSMUST00000122768 106 ntBASIC4.21□□□□□ -1.74
Msx2Q03358 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC4.21□□□□□ -1.74
Msx2Q03358 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC4.21□□□□□ -1.74
Msx2Q03358 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC4.21□□□□□ -1.74
Msx2Q03358 Gm25824-201ENSMUST00000157092 121 ntBASIC4.21□□□□□ -1.74
Msx2Q03358 Gm24251-201ENSMUST00000157324 114 ntBASIC4.21□□□□□ -1.74
Msx2Q03358 Gm22378-201ENSMUST00000157481 111 ntBASIC4.21□□□□□ -1.74
Msx2Q03358 Gm25603-201ENSMUST00000158361 105 ntBASIC4.21□□□□□ -1.74
Msx2Q03358 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Msx2Q03358 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Msx2Q03358 Gm27645-201ENSMUST00000183348 77 ntBASIC4.21□□□□□ -1.74
Msx2Q03358 Gm27543-201ENSMUST00000183562 177 ntBASIC4.21□□□□□ -1.74
Msx2Q03358 Gm28385-201ENSMUST00000185671 292 ntBASIC4.21□□□□□ -1.74
Msx2Q03358 Gm32340-201ENSMUST00000192883 259 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms