Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm13913-201ENSMUST00000121126 260 ntBASIC1.96□□□□□ -2.1
Nkx3-1P97436 Gm24937-201ENSMUST00000122597 134 ntBASIC1.96□□□□□ -2.1
Nkx3-1P97436 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC1.96□□□□□ -2.1
Nkx3-1P97436 Gm25979-201ENSMUST00000157177 138 ntBASIC1.96□□□□□ -2.1
Nkx3-1P97436 Gm25902-201ENSMUST00000158493 318 ntBASIC1.96□□□□□ -2.1
Nkx3-1P97436 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC1.96□□□□□ -2.1
Nkx3-1P97436 Gm17204-201ENSMUST00000167936 478 ntBASIC1.96□□□□□ -2.1
Nkx3-1P97436 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC1.96□□□□□ -2.1
Nkx3-1P97436 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC1.96□□□□□ -2.1
Nkx3-1P97436 Gm18595-201ENSMUST00000175736 1068 ntBASIC1.96□□□□□ -2.1
Nkx3-1P97436 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC1.96□□□□□ -2.1
Nkx3-1P97436 Gm20915-201ENSMUST00000191575 663 ntBASIC1.96□□□□□ -2.1
Nkx3-1P97436 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Nkx3-1P97436 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC1.96□□□□□ -2.1
Nkx3-1P97436 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Nkx3-1P97436 AC147639.1-201ENSMUST00000224216 661 ntBASIC1.96□□□□□ -2.1
Nkx3-1P97436 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Nkx3-1P97436 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
Nkx3-1P97436 Gm26439-201ENSMUST00000082592 106 ntBASIC1.96□□□□□ -2.1
Nkx3-1P97436 Gm26203-201ENSMUST00000082911 114 ntBASIC1.96□□□□□ -2.1
Nkx3-1P97436 Mir222-201ENSMUST00000083537 79 ntBASIC1.96□□□□□ -2.1
Nkx3-1P97436 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Nkx3-1P97436 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Nkx3-1P97436 Gm38162-201ENSMUST00000195562 4597 ntBASIC1.96□□□□□ -2.1
Nkx3-1P97436 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Nkx3-1P97436 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC1.96□□□□□ -2.1
Nkx3-1P97436 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 AC115891.1-201ENSMUST00000215798 1755 ntBASIC1.95□□□□□ -2.1
Nkx3-1P97436 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm25560-201ENSMUST00000104606 176 ntBASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm12509-201ENSMUST00000118033 609 ntBASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm12137-201ENSMUST00000119565 346 ntBASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm6591-201ENSMUST00000121063 434 ntBASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm12327-201ENSMUST00000121729 1168 ntBASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm13676-201ENSMUST00000122185 591 ntBASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm12238-201ENSMUST00000127764 124 ntBASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm22099-201ENSMUST00000157925 123 ntBASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm15900-201ENSMUST00000161584 342 ntBASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm8292-201ENSMUST00000162574 396 ntBASIC1.95□□□□□ -2.1
Nkx3-1P97436 Mir3112-201ENSMUST00000175431 82 ntBASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm7258-201ENSMUST00000179317 300 ntBASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm27999-201ENSMUST00000183539 193 ntBASIC1.95□□□□□ -2.1
Nkx3-1P97436 Mir6406-201ENSMUST00000183592 120 ntBASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm29299-201ENSMUST00000185609 923 ntBASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm17929-201ENSMUST00000186851 627 ntBASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm29573-201ENSMUST00000190291 919 ntBASIC1.95□□□□□ -2.1
Nkx3-1P97436 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm38018-201ENSMUST00000195651 540 ntBASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm44727-201ENSMUST00000204225 451 ntBASIC1.95□□□□□ -2.1
Nkx3-1P97436 AC122194.1-201ENSMUST00000220549 293 ntBASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm5655-201ENSMUST00000221078 901 ntBASIC1.95□□□□□ -2.1
Nkx3-1P97436 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC1.95□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms