Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC2.7□□□□□ -1.98
Sox3P53784 Gm15177-201ENSMUST00000120491 577 ntBASIC2.7□□□□□ -1.98
Sox3P53784 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC2.7□□□□□ -1.98
Sox3P53784 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC2.7□□□□□ -1.98
Sox3P53784 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.7□□□□□ -1.98
Sox3P53784 Gm22794-201ENSMUST00000157228 306 ntBASIC2.7□□□□□ -1.98
Sox3P53784 Gm22765-201ENSMUST00000158371 128 ntBASIC2.7□□□□□ -1.98
Sox3P53784 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Sox3P53784 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Sox3P53784 Gm17054-201ENSMUST00000169811 259 ntBASIC2.7□□□□□ -1.98
Sox3P53784 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC2.7□□□□□ -1.98
Sox3P53784 Gm5709-201ENSMUST00000177879 1165 ntBASIC2.7□□□□□ -1.98
Sox3P53784 Mir6338-201ENSMUST00000183389 109 ntBASIC2.7□□□□□ -1.98
Sox3P53784 Gm27161-201ENSMUST00000183960 562 ntBASIC2.7□□□□□ -1.98
Sox3P53784 Gm28666-201ENSMUST00000186649 274 ntBASIC2.7□□□□□ -1.98
Sox3P53784 Gm29330-201ENSMUST00000190032 699 ntBASIC2.7□□□□□ -1.98
Sox3P53784 Gm28098-201ENSMUST00000191361 699 ntBASIC2.7□□□□□ -1.98
Sox3P53784 Gm35931-201ENSMUST00000203931 448 ntBASIC2.7□□□□□ -1.98
Sox3P53784 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Sox3P53784 Gm7675-201ENSMUST00000208828 686 ntBASIC2.7□□□□□ -1.98
Sox3P53784 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC2.7□□□□□ -1.98
Sox3P53784 Gm4921-201ENSMUST00000219804 992 ntBASIC2.7□□□□□ -1.98
Sox3P53784 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.7□□□□□ -1.98
Sox3P53784 AC154252.1-201ENSMUST00000226041 473 ntBASIC2.7□□□□□ -1.98
Sox3P53784 Gm24698-201ENSMUST00000083883 130 ntBASIC2.7□□□□□ -1.98
Sox3P53784 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.7□□□□□ -1.98
Sox3P53784 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.7□□□□□ -1.98
Sox3P53784 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Sox3P53784 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
Sox3P53784 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
Sox3P53784 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Sox3P53784 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
Sox3P53784 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Sox3P53784 Gm9009-201ENSMUST00000117321 326 ntBASIC2.69□□□□□ -1.98
Sox3P53784 Gm15399-201ENSMUST00000118055 724 ntBASIC2.69□□□□□ -1.98
Sox3P53784 Gm14943-201ENSMUST00000118056 546 ntBASIC2.69□□□□□ -1.98
Sox3P53784 Gm9440-201ENSMUST00000119667 539 ntBASIC2.69□□□□□ -1.98
Sox3P53784 Gm11430-201ENSMUST00000121317 217 ntBASIC2.69□□□□□ -1.98
Sox3P53784 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC2.69□□□□□ -1.98
Sox3P53784 Gm25107-201ENSMUST00000122472 129 ntBASIC2.69□□□□□ -1.98
Sox3P53784 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC2.69□□□□□ -1.98
Sox3P53784 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC2.69□□□□□ -1.98
Sox3P53784 Gm3102-201ENSMUST00000164236 489 ntBASIC2.69□□□□□ -1.98
Sox3P53784 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC2.69□□□□□ -1.98
Sox3P53784 Mir8116-201ENSMUST00000184134 97 ntBASIC2.69□□□□□ -1.98
Sox3P53784 Gm28802-201ENSMUST00000188624 944 ntBASIC2.69□□□□□ -1.98
Sox3P53784 Gm37428-201ENSMUST00000193886 137 ntBASIC2.69□□□□□ -1.98
Sox3P53784 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC2.69□□□□□ -1.98
Sox3P53784 Gm43384-201ENSMUST00000200569 637 ntBASIC2.69□□□□□ -1.98
Sox3P53784 AC154636.3-201ENSMUST00000221489 1214 ntBASIC2.69□□□□□ -1.98
Sox3P53784 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.69□□□□□ -1.98
Sox3P53784 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Sox3P53784 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Sox3P53784 Snora23-201ENSMUST00000082517 184 ntBASIC2.69□□□□□ -1.98
Sox3P53784 Mir184-201ENSMUST00000083662 69 ntBASIC2.69□□□□□ -1.98
Sox3P53784 Gm25008-201ENSMUST00000083809 81 ntBASIC2.69□□□□□ -1.98
Sox3P53784 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Sox3P53784 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Sox3P53784 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Sox3P53784 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
Sox3P53784 Snord14c-201ENSMUST00000101927 86 ntBASIC2.68□□□□□ -1.98
Sox3P53784 Gm14593-201ENSMUST00000119948 294 ntBASIC2.68□□□□□ -1.98
Sox3P53784 Gm13574-201ENSMUST00000120482 394 ntBASIC2.68□□□□□ -1.98
Sox3P53784 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC2.68□□□□□ -1.98
Sox3P53784 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC2.68□□□□□ -1.98
Sox3P53784 Gm14253-201ENSMUST00000122112 639 ntBASIC2.68□□□□□ -1.98
Sox3P53784 Gm23111-201ENSMUST00000122652 105 ntBASIC2.68□□□□□ -1.98
Sox3P53784 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC2.68□□□□□ -1.98
Sox3P53784 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC2.68□□□□□ -1.98
Sox3P53784 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.68□□□□□ -1.98
Sox3P53784 Gm25334-201ENSMUST00000158036 110 ntBASIC2.68□□□□□ -1.98
Sox3P53784 Gm25863-201ENSMUST00000158249 329 ntBASIC2.68□□□□□ -1.98
Sox3P53784 Gm27959-201ENSMUST00000185172 111 ntBASIC2.68□□□□□ -1.98
Sox3P53784 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.68□□□□□ -1.98
Sox3P53784 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
Sox3P53784 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC2.68□□□□□ -1.98
Sox3P53784 Gm30341-201ENSMUST00000194363 289 ntBASIC2.68□□□□□ -1.98
Sox3P53784 Gm37987-201ENSMUST00000194999 825 ntBASIC2.68□□□□□ -1.98
Sox3P53784 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.68□□□□□ -1.98
Sox3P53784 Gm25820-202ENSMUST00000197479 128 ntBASIC2.68□□□□□ -1.98
Sox3P53784 Gm25820-201ENSMUST00000198589 127 ntBASIC2.68□□□□□ -1.98
Sox3P53784 Ighv1-68-201ENSMUST00000198789 294 ntBASIC2.68□□□□□ -1.98
Sox3P53784 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.68□□□□□ -1.98
Sox3P53784 Gm44050-201ENSMUST00000204263 527 ntBASIC2.68□□□□□ -1.98
Sox3P53784 Gm44030-201ENSMUST00000204865 432 ntBASIC2.68□□□□□ -1.98
Sox3P53784 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC2.68□□□□□ -1.98
Sox3P53784 AC153968.2-201ENSMUST00000215579 1140 ntBASIC2.68□□□□□ -1.98
Sox3P53784 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Sox3P53784 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC2.68□□□□□ -1.98
Sox3P53784 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.68□□□□□ -1.98
Sox3P53784 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Sox3P53784 AC167977.2-201ENSMUST00000225676 682 ntBASIC2.68□□□□□ -1.98
Sox3P53784 Gm24707-201ENSMUST00000082812 107 ntBASIC2.68□□□□□ -1.98
Sox3P53784 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Sox3P53784 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Sox3P53784 Gm14442-201ENSMUST00000119690 1736 ntBASIC2.68□□□□□ -1.98
Sox3P53784 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.67□□□□□ -1.98
Sox3P53784 Gm23128-201ENSMUST00000104257 132 ntBASIC2.67□□□□□ -1.98
Sox3P53784 Gm26341-201ENSMUST00000104561 134 ntBASIC2.67□□□□□ -1.98
Sox3P53784 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms