Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 AC154677.1-201ENSMUST00000227636 2805 ntBASIC4.62□□□□□ -1.67
Sox1P53783 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Sox1P53783 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Sox1P53783 Gm37045-201ENSMUST00000192016 2463 ntBASIC4.62□□□□□ -1.67
Sox1P53783 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Sox1P53783 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Sox1P53783 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Sox1P53783 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
Sox1P53783 Gm45557-201ENSMUST00000210004 1651 ntBASIC4.61□□□□□ -1.67
Sox1P53783 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC4.61□□□□□ -1.67
Sox1P53783 Gm44027-201ENSMUST00000203419 3480 ntBASIC4.61□□□□□ -1.67
Sox1P53783 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Sox1P53783 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Sox1P53783 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Sox1P53783 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Sox1P53783 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Sox1P53783 Gm15151-201ENSMUST00000117106 177 ntBASIC4.61□□□□□ -1.67
Sox1P53783 Gm14838-201ENSMUST00000118913 248 ntBASIC4.61□□□□□ -1.67
Sox1P53783 Gm12721-201ENSMUST00000120621 268 ntBASIC4.61□□□□□ -1.67
Sox1P53783 Gm11384-201ENSMUST00000121376 303 ntBASIC4.61□□□□□ -1.67
Sox1P53783 Gm10444-201ENSMUST00000126708 148 ntBASIC4.61□□□□□ -1.67
Sox1P53783 Gm24001-201ENSMUST00000158463 85 ntBASIC4.61□□□□□ -1.67
Sox1P53783 Gm24348-201ENSMUST00000158710 130 ntBASIC4.61□□□□□ -1.67
Sox1P53783 Mir6336-201ENSMUST00000183581 130 ntBASIC4.61□□□□□ -1.67
Sox1P53783 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC4.61□□□□□ -1.67
Sox1P53783 Gm29408-201ENSMUST00000187536 216 ntBASIC4.61□□□□□ -1.67
Sox1P53783 Gm20257-202ENSMUST00000188643 130 ntBASIC4.61□□□□□ -1.67
Sox1P53783 Gm44076-201ENSMUST00000203072 520 ntBASIC4.61□□□□□ -1.67
Sox1P53783 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC4.61□□□□□ -1.67
Sox1P53783 Gm45315-201ENSMUST00000209283 333 ntBASIC4.61□□□□□ -1.67
Sox1P53783 Gm22739-201ENSMUST00000083437 160 ntBASIC4.61□□□□□ -1.67
Sox1P53783 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Sox1P53783 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Sox1P53783 Gm37211-201ENSMUST00000193392 3433 ntBASIC4.61□□□□□ -1.67
Sox1P53783 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Sox1P53783 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Sox1P53783 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Sox1P53783 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Sox1P53783 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Sox1P53783 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Sox1P53783 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC4.6□□□□□ -1.67
Sox1P53783 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Sox1P53783 Gm12080-201ENSMUST00000119821 1883 ntBASIC4.6□□□□□ -1.67
Sox1P53783 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Sox1P53783 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Sox1P53783 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC4.6□□□□□ -1.67
Sox1P53783 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Sox1P53783 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC4.6□□□□□ -1.67
Sox1P53783 Gm7853-201ENSMUST00000100708 478 ntBASIC4.6□□□□□ -1.67
Sox1P53783 Gm12982-201ENSMUST00000117408 190 ntBASIC4.6□□□□□ -1.67
Sox1P53783 Gm14877-201ENSMUST00000119803 478 ntBASIC4.6□□□□□ -1.67
Sox1P53783 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC4.6□□□□□ -1.67
Sox1P53783 Gm24629-201ENSMUST00000122762 89 ntBASIC4.6□□□□□ -1.67
Sox1P53783 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC4.6□□□□□ -1.67
Sox1P53783 Gm25425-201ENSMUST00000157611 96 ntBASIC4.6□□□□□ -1.67
Sox1P53783 Gm24976-201ENSMUST00000158972 135 ntBASIC4.6□□□□□ -1.67
Sox1P53783 Gm10357-201ENSMUST00000159886 264 ntBASIC4.6□□□□□ -1.67
Sox1P53783 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC4.6□□□□□ -1.67
Sox1P53783 Gm26928-201ENSMUST00000182674 572 ntBASIC4.6□□□□□ -1.67
Sox1P53783 Gm27245-201ENSMUST00000184385 376 ntBASIC4.6□□□□□ -1.67
Sox1P53783 Gm29140-201ENSMUST00000190187 476 ntBASIC4.6□□□□□ -1.67
Sox1P53783 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC4.6□□□□□ -1.67
Sox1P53783 AC121898.1-201ENSMUST00000227599 288 ntBASIC4.6□□□□□ -1.67
Sox1P53783 n-R5s162-201ENSMUST00000082581 119 ntBASIC4.6□□□□□ -1.67
Sox1P53783 Gm23731-201ENSMUST00000083749 107 ntBASIC4.6□□□□□ -1.67
Sox1P53783 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.6□□□□□ -1.67
Sox1P53783 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Sox1P53783 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Sox1P53783 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.6□□□□□ -1.67
Sox1P53783 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Sox1P53783 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Sox1P53783 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Sox1P53783 Gm38152-201ENSMUST00000195389 3566 ntBASIC4.59□□□□□ -1.67
Sox1P53783 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Sox1P53783 Gm24867-201ENSMUST00000104161 107 ntBASIC4.59□□□□□ -1.67
Sox1P53783 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC4.59□□□□□ -1.67
Sox1P53783 Gm15426-201ENSMUST00000117823 556 ntBASIC4.59□□□□□ -1.67
Sox1P53783 Gm11718-201ENSMUST00000119942 537 ntBASIC4.59□□□□□ -1.67
Sox1P53783 Gm13477-201ENSMUST00000121620 2687 ntBASIC4.59□□□□□ -1.67
Sox1P53783 Gm12893-201ENSMUST00000121732 275 ntBASIC4.59□□□□□ -1.67
Sox1P53783 Gm14916-201ENSMUST00000121904 204 ntBASIC4.59□□□□□ -1.67
Sox1P53783 Gm13424-201ENSMUST00000122301 354 ntBASIC4.59□□□□□ -1.67
Sox1P53783 Gm25637-201ENSMUST00000157529 107 ntBASIC4.59□□□□□ -1.67
Sox1P53783 Gm22113-201ENSMUST00000158343 104 ntBASIC4.59□□□□□ -1.67
Sox1P53783 Gm23115-201ENSMUST00000158480 108 ntBASIC4.59□□□□□ -1.67
Sox1P53783 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC4.59□□□□□ -1.67
Sox1P53783 Gm10292-201ENSMUST00000183142 581 ntBASIC4.59□□□□□ -1.67
Sox1P53783 Gm29330-201ENSMUST00000190032 699 ntBASIC4.59□□□□□ -1.67
Sox1P53783 Gm37393-201ENSMUST00000195118 3870 ntBASIC4.59□□□□□ -1.67
Sox1P53783 Ighv1-32-201ENSMUST00000195149 351 ntBASIC4.59□□□□□ -1.67
Sox1P53783 Mirlet7e-201ENSMUST00000196737 93 ntBASIC4.59□□□□□ -1.67
Sox1P53783 Gm9379-201ENSMUST00000196790 646 ntBASIC4.59□□□□□ -1.67
Sox1P53783 Gm43853-201ENSMUST00000197162 301 ntBASIC4.59□□□□□ -1.67
Sox1P53783 Gm2033-201ENSMUST00000210753 2287 ntBASIC4.59□□□□□ -1.67
Sox1P53783 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
Sox1P53783 AC161054.1-201ENSMUST00000214319 184 ntBASIC4.59□□□□□ -1.67
Sox1P53783 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Sox1P53783 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Sox1P53783 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Sox1P53783 Gm22061-201ENSMUST00000082557 107 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 103.7 ms