Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC2.56□□□□□ -2
Cxcl12P40224 AC153968.2-201ENSMUST00000215579 1140 ntBASIC2.56□□□□□ -2
Cxcl12P40224 Gm46103-201ENSMUST00000217614 341 ntBASIC2.56□□□□□ -2
Cxcl12P40224 Gm9973-202ENSMUST00000220926 166 ntBASIC2.56□□□□□ -2
Cxcl12P40224 AC120540.1-201ENSMUST00000221879 324 ntBASIC2.56□□□□□ -2
Cxcl12P40224 AC153646.1-201ENSMUST00000223229 1279 ntBASIC2.56□□□□□ -2
Cxcl12P40224 AC131085.1-201ENSMUST00000224746 656 ntBASIC2.56□□□□□ -2
Cxcl12P40224 AC109172.2-201ENSMUST00000228792 381 ntBASIC2.56□□□□□ -2
Cxcl12P40224 AC168062.2-201ENSMUST00000228907 422 ntBASIC2.56□□□□□ -2
Cxcl12P40224 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC2.56□□□□□ -2
Cxcl12P40224 Gm23264-201ENSMUST00000083372 107 ntBASIC2.56□□□□□ -2
Cxcl12P40224 Mir410-201ENSMUST00000083563 81 ntBASIC2.56□□□□□ -2
Cxcl12P40224 Gm15302-201ENSMUST00000117779 2630 ntBASIC2.56□□□□□ -2
Cxcl12P40224 Gm14404-201ENSMUST00000119117 1660 ntBASIC2.56□□□□□ -2
Cxcl12P40224 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Cxcl12P40224 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Cxcl12P40224 Gm43047-201ENSMUST00000200089 3460 ntBASIC2.55□□□□□ -2
Cxcl12P40224 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.55□□□□□ -2
Cxcl12P40224 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.55□□□□□ -2
Cxcl12P40224 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Cxcl12P40224 Gm23691-201ENSMUST00000101878 107 ntBASIC2.55□□□□□ -2
Cxcl12P40224 Gm3940-201ENSMUST00000105087 432 ntBASIC2.55□□□□□ -2
Cxcl12P40224 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
Cxcl12P40224 Gm13728-201ENSMUST00000117471 400 ntBASIC2.55□□□□□ -2
Cxcl12P40224 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.55□□□□□ -2
Cxcl12P40224 Gm5396-201ENSMUST00000121222 532 ntBASIC2.55□□□□□ -2
Cxcl12P40224 Gm15147-201ENSMUST00000122263 483 ntBASIC2.55□□□□□ -2
Cxcl12P40224 Gm12443-201ENSMUST00000122308 323 ntBASIC2.55□□□□□ -2
Cxcl12P40224 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC2.55□□□□□ -2
Cxcl12P40224 Gm25902-201ENSMUST00000158493 318 ntBASIC2.55□□□□□ -2
Cxcl12P40224 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC2.55□□□□□ -2
Cxcl12P40224 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.55□□□□□ -2
Cxcl12P40224 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC2.55□□□□□ -2
Cxcl12P40224 Gm27428-201ENSMUST00000184289 110 ntBASIC2.55□□□□□ -2
Cxcl12P40224 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC2.55□□□□□ -2
Cxcl12P40224 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC2.55□□□□□ -2
Cxcl12P40224 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC2.55□□□□□ -2
Cxcl12P40224 Gm29288-201ENSMUST00000191582 901 ntBASIC2.55□□□□□ -2
Cxcl12P40224 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC2.55□□□□□ -2
Cxcl12P40224 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.55□□□□□ -2
Cxcl12P40224 Gm43498-201ENSMUST00000202002 1486 ntBASIC2.55□□□□□ -2
Cxcl12P40224 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC2.55□□□□□ -2
Cxcl12P40224 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC2.55□□□□□ -2
Cxcl12P40224 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC2.55□□□□□ -2
Cxcl12P40224 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC2.55□□□□□ -2
Cxcl12P40224 Mir222-201ENSMUST00000083537 79 ntBASIC2.55□□□□□ -2
Cxcl12P40224 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Cxcl12P40224 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC2.55□□□□□ -2
Cxcl12P40224 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Cxcl12P40224 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Cxcl12P40224 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
Cxcl12P40224 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Cxcl12P40224 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Cxcl12P40224 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Cxcl12P40224 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC2.54□□□□□ -2
Cxcl12P40224 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC2.54□□□□□ -2
Cxcl12P40224 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
Cxcl12P40224 Snora36b-201ENSMUST00000104383 132 ntBASIC2.54□□□□□ -2
Cxcl12P40224 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC2.54□□□□□ -2
Cxcl12P40224 Gm24907-201ENSMUST00000116932 128 ntBASIC2.54□□□□□ -2
Cxcl12P40224 Gm13614-201ENSMUST00000117306 503 ntBASIC2.54□□□□□ -2
Cxcl12P40224 Gm14537-201ENSMUST00000117464 599 ntBASIC2.54□□□□□ -2
Cxcl12P40224 Gm14402-201ENSMUST00000122217 508 ntBASIC2.54□□□□□ -2
Cxcl12P40224 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC2.54□□□□□ -2
Cxcl12P40224 Gm22769-201ENSMUST00000158367 98 ntBASIC2.54□□□□□ -2
Cxcl12P40224 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Cxcl12P40224 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC2.54□□□□□ -2
Cxcl12P40224 Gm27861-201ENSMUST00000183920 214 ntBASIC2.54□□□□□ -2
Cxcl12P40224 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC2.54□□□□□ -2
Cxcl12P40224 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC2.54□□□□□ -2
Cxcl12P40224 Gm43043-201ENSMUST00000196579 412 ntBASIC2.54□□□□□ -2
Cxcl12P40224 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC2.54□□□□□ -2
Cxcl12P40224 Mir497-201ENSMUST00000200557 84 ntBASIC2.54□□□□□ -2
Cxcl12P40224 Gm45678-201ENSMUST00000210509 295 ntBASIC2.54□□□□□ -2
Cxcl12P40224 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC2.54□□□□□ -2
Cxcl12P40224 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC2.54□□□□□ -2
Cxcl12P40224 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC2.54□□□□□ -2
Cxcl12P40224 AC166358.6-201ENSMUST00000221834 1206 ntBASIC2.54□□□□□ -2
Cxcl12P40224 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.54□□□□□ -2
Cxcl12P40224 Gm10088-201ENSMUST00000074116 423 ntBASIC2.54□□□□□ -2
Cxcl12P40224 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Cxcl12P40224 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
Cxcl12P40224 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.54□□□□□ -2
Cxcl12P40224 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.54□□□□□ -2
Cxcl12P40224 Gm17976-201ENSMUST00000184037 1909 ntBASIC2.54□□□□□ -2
Cxcl12P40224 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC2.53□□□□□ -2
Cxcl12P40224 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Cxcl12P40224 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Cxcl12P40224 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
Cxcl12P40224 Snord14c-201ENSMUST00000101927 86 ntBASIC2.53□□□□□ -2
Cxcl12P40224 Gm23010-201ENSMUST00000104151 126 ntBASIC2.53□□□□□ -2
Cxcl12P40224 Gm9009-201ENSMUST00000117321 326 ntBASIC2.53□□□□□ -2
Cxcl12P40224 Gm11285-201ENSMUST00000118443 322 ntBASIC2.53□□□□□ -2
Cxcl12P40224 Gm12137-201ENSMUST00000119565 346 ntBASIC2.53□□□□□ -2
Cxcl12P40224 Gm22026-201ENSMUST00000122735 281 ntBASIC2.53□□□□□ -2
Cxcl12P40224 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC2.53□□□□□ -2
Cxcl12P40224 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.53□□□□□ -2
Cxcl12P40224 Gm16232-201ENSMUST00000162856 167 ntBASIC2.53□□□□□ -2
Cxcl12P40224 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC2.53□□□□□ -2
Cxcl12P40224 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms