Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC2.58□□□□□ -2
Col2a1P28481 AC121844.1-201ENSMUST00000218706 137 ntBASIC2.58□□□□□ -2
Col2a1P28481 AC079644.1-201ENSMUST00000220586 405 ntBASIC2.58□□□□□ -2
Col2a1P28481 AC134468.2-201ENSMUST00000222549 672 ntBASIC2.58□□□□□ -2
Col2a1P28481 AC144733.1-201ENSMUST00000222893 1289 ntBASIC2.58□□□□□ -2
Col2a1P28481 AC167192.4-201ENSMUST00000224087 993 ntBASIC2.58□□□□□ -2
Col2a1P28481 Gm37903-201ENSMUST00000192122 2381 ntBASIC2.57□□□□□ -2
Col2a1P28481 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.57□□□□□ -2
Col2a1P28481 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Col2a1P28481 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC2.57□□□□□ -2
Col2a1P28481 Gm24715-201ENSMUST00000102377 95 ntBASIC2.57□□□□□ -2
Col2a1P28481 Mir190b-201ENSMUST00000104803 80 ntBASIC2.57□□□□□ -2
Col2a1P28481 Gm14541-201ENSMUST00000118985 157 ntBASIC2.57□□□□□ -2
Col2a1P28481 Gm14903-201ENSMUST00000122435 537 ntBASIC2.57□□□□□ -2
Col2a1P28481 Gm17154-201ENSMUST00000165748 431 ntBASIC2.57□□□□□ -2
Col2a1P28481 Gm24811-201ENSMUST00000175313 100 ntBASIC2.57□□□□□ -2
Col2a1P28481 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC2.57□□□□□ -2
Col2a1P28481 Gm27580-201ENSMUST00000183666 149 ntBASIC2.57□□□□□ -2
Col2a1P28481 Gm28648-201ENSMUST00000190092 343 ntBASIC2.57□□□□□ -2
Col2a1P28481 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC2.57□□□□□ -2
Col2a1P28481 Gm9251-201ENSMUST00000197202 628 ntBASIC2.57□□□□□ -2
Col2a1P28481 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC2.57□□□□□ -2
Col2a1P28481 Gm43427-201ENSMUST00000198188 331 ntBASIC2.57□□□□□ -2
Col2a1P28481 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC2.57□□□□□ -2
Col2a1P28481 Gm45150-201ENSMUST00000206051 467 ntBASIC2.57□□□□□ -2
Col2a1P28481 AC122465.3-201ENSMUST00000221644 355 ntBASIC2.57□□□□□ -2
Col2a1P28481 AC166358.6-201ENSMUST00000221834 1206 ntBASIC2.57□□□□□ -2
Col2a1P28481 CT030166.1-201ENSMUST00000222654 357 ntBASIC2.57□□□□□ -2
Col2a1P28481 AC154257.2-201ENSMUST00000224166 340 ntBASIC2.57□□□□□ -2
Col2a1P28481 AC154506.3-201ENSMUST00000225417 213 ntBASIC2.57□□□□□ -2
Col2a1P28481 AC167192.1-201ENSMUST00000225908 139 ntBASIC2.57□□□□□ -2
Col2a1P28481 AC125464.1-201ENSMUST00000228013 512 ntBASIC2.57□□□□□ -2
Col2a1P28481 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Col2a1P28481 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Col2a1P28481 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC2.57□□□□□ -2
Col2a1P28481 Gm25582-201ENSMUST00000083412 110 ntBASIC2.57□□□□□ -2
Col2a1P28481 Mir16-2-201ENSMUST00000083672 95 ntBASIC2.57□□□□□ -2
Col2a1P28481 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Col2a1P28481 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC2.57□□□□□ -2
Col2a1P28481 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Col2a1P28481 Gm38278-201ENSMUST00000194715 1365 ntBASIC2.56□□□□□ -2
Col2a1P28481 AC124746.1-201ENSMUST00000227535 1300 ntBASIC2.56□□□□□ -2
Col2a1P28481 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Col2a1P28481 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Col2a1P28481 Gm25097-201ENSMUST00000104042 145 ntBASIC2.56□□□□□ -2
Col2a1P28481 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC2.56□□□□□ -2
Col2a1P28481 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC2.56□□□□□ -2
Col2a1P28481 Gm11991-201ENSMUST00000119652 1074 ntBASIC2.56□□□□□ -2
Col2a1P28481 Gm14927-201ENSMUST00000120283 454 ntBASIC2.56□□□□□ -2
Col2a1P28481 Gm15157-201ENSMUST00000121852 702 ntBASIC2.56□□□□□ -2
Col2a1P28481 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC2.56□□□□□ -2
Col2a1P28481 Gm25150-201ENSMUST00000157121 60 ntBASIC2.56□□□□□ -2
Col2a1P28481 Gm25910-201ENSMUST00000157620 140 ntBASIC2.56□□□□□ -2
Col2a1P28481 Gm22093-201ENSMUST00000158980 111 ntBASIC2.56□□□□□ -2
Col2a1P28481 Gm23505-201ENSMUST00000158989 130 ntBASIC2.56□□□□□ -2
Col2a1P28481 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.56□□□□□ -2
Col2a1P28481 Fth-ps2-201ENSMUST00000168364 516 ntBASIC2.56□□□□□ -2
Col2a1P28481 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC2.56□□□□□ -2
Col2a1P28481 Gm28437-201ENSMUST00000190277 783 ntBASIC2.56□□□□□ -2
Col2a1P28481 Gm42958-201ENSMUST00000197595 318 ntBASIC2.56□□□□□ -2
Col2a1P28481 Mir3069-201ENSMUST00000198802 65 ntBASIC2.56□□□□□ -2
Col2a1P28481 AC124542.1-201ENSMUST00000205588 908 ntBASIC2.56□□□□□ -2
Col2a1P28481 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.56□□□□□ -2
Col2a1P28481 AC124569.1-201ENSMUST00000225932 101 ntBASIC2.56□□□□□ -2
Col2a1P28481 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.56□□□□□ -2
Col2a1P28481 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC2.56□□□□□ -2
Col2a1P28481 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Col2a1P28481 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
Col2a1P28481 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.55□□□□□ -2
Col2a1P28481 Gm42967-201ENSMUST00000198647 2312 ntBASIC2.55□□□□□ -2
Col2a1P28481 Gm23431-201ENSMUST00000104006 107 ntBASIC2.55□□□□□ -2
Col2a1P28481 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Col2a1P28481 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Col2a1P28481 Gm16412-201ENSMUST00000121602 273 ntBASIC2.55□□□□□ -2
Col2a1P28481 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC2.55□□□□□ -2
Col2a1P28481 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC2.55□□□□□ -2
Col2a1P28481 Gm10177-202ENSMUST00000161698 207 ntBASIC2.55□□□□□ -2
Col2a1P28481 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Col2a1P28481 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC2.55□□□□□ -2
Col2a1P28481 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Col2a1P28481 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC2.55□□□□□ -2
Col2a1P28481 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Col2a1P28481 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Col2a1P28481 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Col2a1P28481 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Col2a1P28481 Gm2092-201ENSMUST00000178887 639 ntBASIC2.55□□□□□ -2
Col2a1P28481 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Col2a1P28481 Gm2759-201ENSMUST00000179938 639 ntBASIC2.55□□□□□ -2
Col2a1P28481 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC2.55□□□□□ -2
Col2a1P28481 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC2.55□□□□□ -2
Col2a1P28481 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.55□□□□□ -2
Col2a1P28481 Gm30341-201ENSMUST00000194363 289 ntBASIC2.55□□□□□ -2
Col2a1P28481 Gm36954-201ENSMUST00000195362 363 ntBASIC2.55□□□□□ -2
Col2a1P28481 Gm43582-201ENSMUST00000196149 343 ntBASIC2.55□□□□□ -2
Col2a1P28481 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC2.55□□□□□ -2
Col2a1P28481 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC2.55□□□□□ -2
Col2a1P28481 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC2.55□□□□□ -2
Col2a1P28481 Gm43675-201ENSMUST00000199468 1184 ntBASIC2.55□□□□□ -2
Col2a1P28481 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC2.55□□□□□ -2
Col2a1P28481 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC2.55□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms