Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Sdc1P18828 AC167250.1-201ENSMUST00000213739 3813 ntBASIC2.23□□□□□ -2.05
Sdc1P18828 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Sdc1P18828 Gm8473-201ENSMUST00000176697 1885 ntBASIC2.23□□□□□ -2.05
Sdc1P18828 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
Sdc1P18828 Gm12513-201ENSMUST00000118617 352 ntBASIC2.23□□□□□ -2.05
Sdc1P18828 Gm16412-201ENSMUST00000121602 273 ntBASIC2.23□□□□□ -2.05
Sdc1P18828 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Sdc1P18828 Gm26186-201ENSMUST00000157689 125 ntBASIC2.23□□□□□ -2.05
Sdc1P18828 Gm22765-201ENSMUST00000158371 128 ntBASIC2.23□□□□□ -2.05
Sdc1P18828 Gm10177-202ENSMUST00000161698 207 ntBASIC2.23□□□□□ -2.05
Sdc1P18828 Gm17154-201ENSMUST00000165748 431 ntBASIC2.23□□□□□ -2.05
Sdc1P18828 Gm8207-201ENSMUST00000171204 502 ntBASIC2.23□□□□□ -2.05
Sdc1P18828 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC2.23□□□□□ -2.05
Sdc1P18828 Gm24813-201ENSMUST00000175310 84 ntBASIC2.23□□□□□ -2.05
Sdc1P18828 Gm26297-201ENSMUST00000179464 132 ntBASIC2.23□□□□□ -2.05
Sdc1P18828 Gm24264-201ENSMUST00000179835 94 ntBASIC2.23□□□□□ -2.05
Sdc1P18828 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Sdc1P18828 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC2.23□□□□□ -2.05
Sdc1P18828 Gm28314-201ENSMUST00000191276 345 ntBASIC2.23□□□□□ -2.05
Sdc1P18828 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC2.23□□□□□ -2.05
Sdc1P18828 Gm38044-201ENSMUST00000192964 487 ntBASIC2.23□□□□□ -2.05
Sdc1P18828 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.23□□□□□ -2.05
Sdc1P18828 Gm42665-201ENSMUST00000202100 586 ntBASIC2.23□□□□□ -2.05
Sdc1P18828 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.23□□□□□ -2.05
Sdc1P18828 Gm7624-201ENSMUST00000209702 435 ntBASIC2.23□□□□□ -2.05
Sdc1P18828 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC2.23□□□□□ -2.05
Sdc1P18828 Gm19219-201ENSMUST00000215863 724 ntBASIC2.23□□□□□ -2.05
Sdc1P18828 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Sdc1P18828 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Sdc1P18828 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Sdc1P18828 Gm25131-201ENSMUST00000082653 151 ntBASIC2.23□□□□□ -2.05
Sdc1P18828 Gm24948-201ENSMUST00000082866 207 ntBASIC2.23□□□□□ -2.05
Sdc1P18828 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Sdc1P18828 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Sdc1P18828 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.23□□□□□ -2.05
Sdc1P18828 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Sdc1P18828 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Sdc1P18828 Mir466n-201ENSMUST00000104798 94 ntBASIC2.22□□□□□ -2.05
Sdc1P18828 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Sdc1P18828 Gm12814-201ENSMUST00000117091 846 ntBASIC2.22□□□□□ -2.05
Sdc1P18828 Gm14794-201ENSMUST00000118181 192 ntBASIC2.22□□□□□ -2.05
Sdc1P18828 Gm11785-201ENSMUST00000120165 601 ntBASIC2.22□□□□□ -2.05
Sdc1P18828 Gm15272-201ENSMUST00000120865 233 ntBASIC2.22□□□□□ -2.05
Sdc1P18828 Gm22986-201ENSMUST00000122753 130 ntBASIC2.22□□□□□ -2.05
Sdc1P18828 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC2.22□□□□□ -2.05
Sdc1P18828 Gm25572-201ENSMUST00000157527 172 ntBASIC2.22□□□□□ -2.05
Sdc1P18828 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
Sdc1P18828 Gm5473-201ENSMUST00000179326 642 ntBASIC2.22□□□□□ -2.05
Sdc1P18828 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.22□□□□□ -2.05
Sdc1P18828 Mir6363-201ENSMUST00000184880 114 ntBASIC2.22□□□□□ -2.05
Sdc1P18828 AC154296.1-201ENSMUST00000198150 67 ntBASIC2.22□□□□□ -2.05
Sdc1P18828 Gm43930-201ENSMUST00000203868 845 ntBASIC2.22□□□□□ -2.05
Sdc1P18828 Gm5317-201ENSMUST00000204445 847 ntBASIC2.22□□□□□ -2.05
Sdc1P18828 Gm44555-201ENSMUST00000209008 148 ntBASIC2.22□□□□□ -2.05
Sdc1P18828 Gm45636-201ENSMUST00000210497 1064 ntBASIC2.22□□□□□ -2.05
Sdc1P18828 Gm45860-201ENSMUST00000212700 334 ntBASIC2.22□□□□□ -2.05
Sdc1P18828 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC2.22□□□□□ -2.05
Sdc1P18828 Gm18346-201ENSMUST00000216782 325 ntBASIC2.22□□□□□ -2.05
Sdc1P18828 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Sdc1P18828 Gm7119-201ENSMUST00000221345 695 ntBASIC2.22□□□□□ -2.05
Sdc1P18828 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Sdc1P18828 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Sdc1P18828 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC2.22□□□□□ -2.05
Sdc1P18828 Gm23247-201ENSMUST00000083373 107 ntBASIC2.22□□□□□ -2.05
Sdc1P18828 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.22□□□□□ -2.05
Sdc1P18828 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Sdc1P18828 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
Sdc1P18828 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC2.21□□□□□ -2.06
Sdc1P18828 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
Sdc1P18828 Gm25833-201ENSMUST00000104137 133 ntBASIC2.21□□□□□ -2.06
Sdc1P18828 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Sdc1P18828 Gm6954-201ENSMUST00000117416 225 ntBASIC2.21□□□□□ -2.06
Sdc1P18828 Gm11576-201ENSMUST00000117433 417 ntBASIC2.21□□□□□ -2.06
Sdc1P18828 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC2.21□□□□□ -2.06
Sdc1P18828 Gm15190-201ENSMUST00000120855 276 ntBASIC2.21□□□□□ -2.06
Sdc1P18828 Gm22452-201ENSMUST00000122804 104 ntBASIC2.21□□□□□ -2.06
Sdc1P18828 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC2.21□□□□□ -2.06
Sdc1P18828 Gm23980-201ENSMUST00000157135 158 ntBASIC2.21□□□□□ -2.06
Sdc1P18828 Gm24443-201ENSMUST00000157242 132 ntBASIC2.21□□□□□ -2.06
Sdc1P18828 Gm23538-201ENSMUST00000157535 101 ntBASIC2.21□□□□□ -2.06
Sdc1P18828 Gm23137-201ENSMUST00000157559 107 ntBASIC2.21□□□□□ -2.06
Sdc1P18828 Gm23223-201ENSMUST00000158119 127 ntBASIC2.21□□□□□ -2.06
Sdc1P18828 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.21□□□□□ -2.06
Sdc1P18828 Mir5710-201ENSMUST00000176884 69 ntBASIC2.21□□□□□ -2.06
Sdc1P18828 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.21□□□□□ -2.06
Sdc1P18828 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC2.21□□□□□ -2.06
Sdc1P18828 Gm37037-201ENSMUST00000194475 424 ntBASIC2.21□□□□□ -2.06
Sdc1P18828 Gm43193-201ENSMUST00000197732 441 ntBASIC2.21□□□□□ -2.06
Sdc1P18828 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC2.21□□□□□ -2.06
Sdc1P18828 Igkv1-136-201ENSMUST00000200635 297 ntBASIC2.21□□□□□ -2.06
Sdc1P18828 Gm43992-201ENSMUST00000204358 197 ntBASIC2.21□□□□□ -2.06
Sdc1P18828 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC2.21□□□□□ -2.06
Sdc1P18828 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC2.21□□□□□ -2.06
Sdc1P18828 AC165146.1-201ENSMUST00000223777 900 ntBASIC2.21□□□□□ -2.06
Sdc1P18828 AC168880.1-201ENSMUST00000225113 707 ntBASIC2.21□□□□□ -2.06
Sdc1P18828 AC118639.1-204ENSMUST00000226401 694 ntBASIC2.21□□□□□ -2.06
Sdc1P18828 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.21□□□□□ -2.06
Sdc1P18828 AC121898.1-201ENSMUST00000227599 288 ntBASIC2.21□□□□□ -2.06
Sdc1P18828 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 98.4 ms