Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Cdx1P18111 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Cdx1P18111 Gm25203-201ENSMUST00000082842 215 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Gm23650-201ENSMUST00000083355 70 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Gm42659-201ENSMUST00000196955 1754 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.33□□□□□ -2.04
Cdx1P18111 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Cdx1P18111 Gm13502-201ENSMUST00000121574 684 ntBASIC2.32□□□□□ -2.04
Cdx1P18111 Gm12819-201ENSMUST00000122223 629 ntBASIC2.32□□□□□ -2.04
Cdx1P18111 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC2.32□□□□□ -2.04
Cdx1P18111 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Cdx1P18111 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC2.32□□□□□ -2.04
Cdx1P18111 Gm25283-201ENSMUST00000157272 77 ntBASIC2.32□□□□□ -2.04
Cdx1P18111 Gm24911-201ENSMUST00000157292 136 ntBASIC2.32□□□□□ -2.04
Cdx1P18111 Gm24787-201ENSMUST00000157380 123 ntBASIC2.32□□□□□ -2.04
Cdx1P18111 Gm24190-201ENSMUST00000157976 216 ntBASIC2.32□□□□□ -2.04
Cdx1P18111 Gm22532-201ENSMUST00000158822 140 ntBASIC2.32□□□□□ -2.04
Cdx1P18111 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Cdx1P18111 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Cdx1P18111 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC2.32□□□□□ -2.04
Cdx1P18111 Gm5709-201ENSMUST00000177879 1165 ntBASIC2.32□□□□□ -2.04
Cdx1P18111 Mir7050-201ENSMUST00000184636 60 ntBASIC2.32□□□□□ -2.04
Cdx1P18111 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.32□□□□□ -2.04
Cdx1P18111 Gm28113-201ENSMUST00000188280 229 ntBASIC2.32□□□□□ -2.04
Cdx1P18111 Ighv3-7-201ENSMUST00000193370 348 ntBASIC2.32□□□□□ -2.04
Cdx1P18111 Trbv6-201ENSMUST00000193743 276 ntBASIC2.32□□□□□ -2.04
Cdx1P18111 AC154296.1-201ENSMUST00000198150 67 ntBASIC2.32□□□□□ -2.04
Cdx1P18111 Gm43284-201ENSMUST00000200103 253 ntBASIC2.32□□□□□ -2.04
Cdx1P18111 Gm19649-201ENSMUST00000201126 822 ntBASIC2.32□□□□□ -2.04
Cdx1P18111 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC2.32□□□□□ -2.04
Cdx1P18111 Gm45791-201ENSMUST00000212908 352 ntBASIC2.32□□□□□ -2.04
Cdx1P18111 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC2.32□□□□□ -2.04
Cdx1P18111 AC166369.3-201ENSMUST00000227286 409 ntBASIC2.32□□□□□ -2.04
Cdx1P18111 Gm5471-201ENSMUST00000072732 337 ntBASIC2.32□□□□□ -2.04
Cdx1P18111 Gm22249-201ENSMUST00000082485 136 ntBASIC2.32□□□□□ -2.04
Cdx1P18111 Gm22979-201ENSMUST00000082609 159 ntBASIC2.32□□□□□ -2.04
Cdx1P18111 Gm24622-201ENSMUST00000082619 162 ntBASIC2.32□□□□□ -2.04
Cdx1P18111 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Cdx1P18111 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC2.32□□□□□ -2.04
Cdx1P18111 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.32□□□□□ -2.04
Cdx1P18111 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Cdx1P18111 Gm650-201ENSMUST00000144428 1551 ntBASIC2.32□□□□□ -2.04
Cdx1P18111 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Cdx1P18111 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Cdx1P18111 AC115891.1-201ENSMUST00000215798 1755 ntBASIC2.31□□□□□ -2.04
Cdx1P18111 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Cdx1P18111 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Cdx1P18111 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Cdx1P18111 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
Cdx1P18111 Gm14579-201ENSMUST00000117068 283 ntBASIC2.31□□□□□ -2.04
Cdx1P18111 Gm14879-201ENSMUST00000117308 507 ntBASIC2.31□□□□□ -2.04
Cdx1P18111 Gm6954-201ENSMUST00000117416 225 ntBASIC2.31□□□□□ -2.04
Cdx1P18111 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC2.31□□□□□ -2.04
Cdx1P18111 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC2.31□□□□□ -2.04
Cdx1P18111 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC2.31□□□□□ -2.04
Cdx1P18111 Gm11285-201ENSMUST00000118443 322 ntBASIC2.31□□□□□ -2.04
Cdx1P18111 Gm14815-201ENSMUST00000120060 488 ntBASIC2.31□□□□□ -2.04
Cdx1P18111 Gm11785-201ENSMUST00000120165 601 ntBASIC2.31□□□□□ -2.04
Cdx1P18111 Gm14898-201ENSMUST00000120202 645 ntBASIC2.31□□□□□ -2.04
Cdx1P18111 Gm14238-201ENSMUST00000120227 323 ntBASIC2.31□□□□□ -2.04
Cdx1P18111 Gm5287-201ENSMUST00000120666 598 ntBASIC2.31□□□□□ -2.04
Cdx1P18111 Gm14736-201ENSMUST00000121470 336 ntBASIC2.31□□□□□ -2.04
Cdx1P18111 Gm25321-201ENSMUST00000122558 102 ntBASIC2.31□□□□□ -2.04
Cdx1P18111 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.31□□□□□ -2.04
Cdx1P18111 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Cdx1P18111 Gm22722-201ENSMUST00000157467 132 ntBASIC2.31□□□□□ -2.04
Cdx1P18111 Gm22833-201ENSMUST00000158292 132 ntBASIC2.31□□□□□ -2.04
Cdx1P18111 Mir3092-201ENSMUST00000174954 96 ntBASIC2.31□□□□□ -2.04
Cdx1P18111 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC2.31□□□□□ -2.04
Cdx1P18111 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.31□□□□□ -2.04
Cdx1P18111 Gm44391-201ENSMUST00000198490 93 ntBASIC2.31□□□□□ -2.04
Cdx1P18111 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC2.31□□□□□ -2.04
Cdx1P18111 Gm45513-201ENSMUST00000210228 376 ntBASIC2.31□□□□□ -2.04
Cdx1P18111 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC2.31□□□□□ -2.04
Cdx1P18111 AC129541.1-201ENSMUST00000226940 523 ntBASIC2.31□□□□□ -2.04
Cdx1P18111 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Cdx1P18111 Gm22575-201ENSMUST00000082981 110 ntBASIC2.31□□□□□ -2.04
Cdx1P18111 Gm23102-201ENSMUST00000083724 116 ntBASIC2.31□□□□□ -2.04
Cdx1P18111 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
Cdx1P18111 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Cdx1P18111 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.31□□□□□ -2.04
Cdx1P18111 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Cdx1P18111 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Cdx1P18111 Gm24068-201ENSMUST00000104513 132 ntBASIC2.3□□□□□ -2.04
Cdx1P18111 Gm14867-201ENSMUST00000120156 866 ntBASIC2.3□□□□□ -2.04
Cdx1P18111 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC2.3□□□□□ -2.04
Cdx1P18111 Gm16021-201ENSMUST00000121176 219 ntBASIC2.3□□□□□ -2.04
Cdx1P18111 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2.3□□□□□ -2.04
Cdx1P18111 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Cdx1P18111 Gm8580-201ENSMUST00000160295 464 ntBASIC2.3□□□□□ -2.04
Cdx1P18111 Gm17061-201ENSMUST00000163167 499 ntBASIC2.3□□□□□ -2.04
Cdx1P18111 Mir3965-201ENSMUST00000175570 69 ntBASIC2.3□□□□□ -2.04
Cdx1P18111 Gm23933-201ENSMUST00000178405 79 ntBASIC2.3□□□□□ -2.04
Cdx1P18111 Gm21893-201ENSMUST00000179119 397 ntBASIC2.3□□□□□ -2.04
Cdx1P18111 Gm26297-201ENSMUST00000179464 132 ntBASIC2.3□□□□□ -2.04
Cdx1P18111 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC2.3□□□□□ -2.04
Cdx1P18111 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Cdx1P18111 Gm44060-201ENSMUST00000204440 410 ntBASIC2.3□□□□□ -2.04
Cdx1P18111 Gm44157-201ENSMUST00000204720 410 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms