Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm13194-201ENSMUST00000142299 311 ntBASIC2.03□□□□□ -2.09
Col5a1O88207 Gm22158-201ENSMUST00000158411 126 ntBASIC2.03□□□□□ -2.09
Col5a1O88207 Gm24768-201ENSMUST00000158512 94 ntBASIC2.03□□□□□ -2.09
Col5a1O88207 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC2.03□□□□□ -2.09
Col5a1O88207 Gm21894-201ENSMUST00000179631 546 ntBASIC2.03□□□□□ -2.09
Col5a1O88207 Gm26864-201ENSMUST00000181346 156 ntBASIC2.03□□□□□ -2.09
Col5a1O88207 Gm27733-201ENSMUST00000184803 68 ntBASIC2.03□□□□□ -2.09
Col5a1O88207 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC2.03□□□□□ -2.09
Col5a1O88207 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
Col5a1O88207 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC2.03□□□□□ -2.09
Col5a1O88207 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC2.03□□□□□ -2.09
Col5a1O88207 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC2.03□□□□□ -2.09
Col5a1O88207 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
Col5a1O88207 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
Col5a1O88207 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC2.03□□□□□ -2.09
Col5a1O88207 Gm43897-201ENSMUST00000204019 309 ntBASIC2.03□□□□□ -2.09
Col5a1O88207 Gm45189-201ENSMUST00000208567 363 ntBASIC2.03□□□□□ -2.09
Col5a1O88207 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC2.03□□□□□ -2.09
Col5a1O88207 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC2.03□□□□□ -2.09
Col5a1O88207 AC124433.2-201ENSMUST00000223867 291 ntBASIC2.03□□□□□ -2.09
Col5a1O88207 AC151907.1-201ENSMUST00000228812 412 ntBASIC2.03□□□□□ -2.09
Col5a1O88207 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC2.03□□□□□ -2.09
Col5a1O88207 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC2.03□□□□□ -2.09
Col5a1O88207 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
Col5a1O88207 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
Col5a1O88207 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Col5a1O88207 Gm9009-201ENSMUST00000117321 326 ntBASIC2.02□□□□□ -2.09
Col5a1O88207 Gm15382-201ENSMUST00000118011 537 ntBASIC2.02□□□□□ -2.09
Col5a1O88207 Gm16412-201ENSMUST00000121602 273 ntBASIC2.02□□□□□ -2.09
Col5a1O88207 Gm23183-201ENSMUST00000122595 323 ntBASIC2.02□□□□□ -2.09
Col5a1O88207 Gm23234-201ENSMUST00000157304 134 ntBASIC2.02□□□□□ -2.09
Col5a1O88207 Gm24900-201ENSMUST00000158128 134 ntBASIC2.02□□□□□ -2.09
Col5a1O88207 Gm22517-201ENSMUST00000158265 136 ntBASIC2.02□□□□□ -2.09
Col5a1O88207 Gm23005-201ENSMUST00000158950 136 ntBASIC2.02□□□□□ -2.09
Col5a1O88207 Gm10177-202ENSMUST00000161698 207 ntBASIC2.02□□□□□ -2.09
Col5a1O88207 Gm18358-201ENSMUST00000173179 1277 ntBASIC2.02□□□□□ -2.09
Col5a1O88207 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC2.02□□□□□ -2.09
Col5a1O88207 Gm22693-201ENSMUST00000175049 442 ntBASIC2.02□□□□□ -2.09
Col5a1O88207 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC2.02□□□□□ -2.09
Col5a1O88207 Gm22252-201ENSMUST00000179316 79 ntBASIC2.02□□□□□ -2.09
Col5a1O88207 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Col5a1O88207 Gm37000-201ENSMUST00000193058 428 ntBASIC2.02□□□□□ -2.09
Col5a1O88207 Gm37193-201ENSMUST00000193087 513 ntBASIC2.02□□□□□ -2.09
Col5a1O88207 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Col5a1O88207 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Col5a1O88207 Gm43228-201ENSMUST00000200735 264 ntBASIC2.02□□□□□ -2.09
Col5a1O88207 Gm19252-201ENSMUST00000204705 305 ntBASIC2.02□□□□□ -2.09
Col5a1O88207 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Col5a1O88207 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Col5a1O88207 Gm7739-201ENSMUST00000221131 1560 ntBASIC2.02□□□□□ -2.09
Col5a1O88207 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC2.02□□□□□ -2.09
Col5a1O88207 AC116395.1-201ENSMUST00000225480 1143 ntBASIC2.02□□□□□ -2.09
Col5a1O88207 AC155314.1-201ENSMUST00000227624 508 ntBASIC2.02□□□□□ -2.09
Col5a1O88207 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Col5a1O88207 Mir325-201ENSMUST00000083491 98 ntBASIC2.02□□□□□ -2.09
Col5a1O88207 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Col5a1O88207 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Col5a1O88207 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.02□□□□□ -2.09
Col5a1O88207 Gm45577-201ENSMUST00000210206 2287 ntBASIC2.02□□□□□ -2.09
Col5a1O88207 Gm20679-201ENSMUST00000177285 1402 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Mir147-201ENSMUST00000102354 79 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Gm25832-201ENSMUST00000104140 130 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Gm25509-201ENSMUST00000116985 106 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Gm15193-201ENSMUST00000120224 865 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Gm12748-201ENSMUST00000120763 504 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Gm16363-201ENSMUST00000132460 877 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Gm22143-201ENSMUST00000157401 203 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Gm24393-201ENSMUST00000158135 97 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Gm24394-201ENSMUST00000158141 123 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Gm24666-201ENSMUST00000158937 167 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Gm22093-201ENSMUST00000158980 111 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Gm22858-201ENSMUST00000174972 76 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Gm27718-201ENSMUST00000183721 86 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Mir6405-201ENSMUST00000184584 124 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC2.01□□□□□ -2.09
Col5a1O88207 Gm42509-201ENSMUST00000197390 781 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Gm43676-201ENSMUST00000197532 540 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Gm43493-201ENSMUST00000199837 202 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Col5a1O88207 AC122924.2-201ENSMUST00000220799 298 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC2.01□□□□□ -2.09
Col5a1O88207 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Col5a1O88207 Gm22806-201ENSMUST00000082738 136 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Col5a1O88207 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Col5a1O88207 Gm42942-201ENSMUST00000196086 1328 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Col5a1O88207 Gm3563-201ENSMUST00000172963 1628 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Col5a1O88207 Gm26396-201ENSMUST00000104093 132 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC2.01□□□□□ -2.09
Col5a1O88207 Gm23109-201ENSMUST00000116867 126 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Gm14880-201ENSMUST00000117581 292 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Gm11577-201ENSMUST00000118030 737 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Gm12935-201ENSMUST00000119352 246 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Gm15488-201ENSMUST00000121682 670 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Gm23600-201ENSMUST00000157260 71 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Gm26349-201ENSMUST00000157530 130 ntBASIC2.01□□□□□ -2.09
Col5a1O88207 Gm25185-201ENSMUST00000157754 96 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 95.3 ms