Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm14815-201ENSMUST00000120060 488 ntBASIC2.58□□□□□ -2
Ccdc180J3QNE4 Gm23558-201ENSMUST00000157823 80 ntBASIC2.58□□□□□ -2
Ccdc180J3QNE4 Gm17062-201ENSMUST00000166987 461 ntBASIC2.58□□□□□ -2
Ccdc180J3QNE4 Gm17946-201ENSMUST00000186856 538 ntBASIC2.58□□□□□ -2
Ccdc180J3QNE4 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC2.58□□□□□ -2
Ccdc180J3QNE4 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Ccdc180J3QNE4 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Ccdc180J3QNE4 Gm15488-201ENSMUST00000121682 670 ntBASIC2.57□□□□□ -2
Ccdc180J3QNE4 Mir7052-201ENSMUST00000184821 65 ntBASIC2.57□□□□□ -2
Ccdc180J3QNE4 Mir6962-201ENSMUST00000199512 63 ntBASIC2.57□□□□□ -2
Ccdc180J3QNE4 Gm44061-201ENSMUST00000203962 1195 ntBASIC2.57□□□□□ -2
Ccdc180J3QNE4 Gm20948-201ENSMUST00000211091 449 ntBASIC2.57□□□□□ -2
Ccdc180J3QNE4 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
Ccdc180J3QNE4 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC2.57□□□□□ -2
Ccdc180J3QNE4 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC2.57□□□□□ -2
Ccdc180J3QNE4 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC2.57□□□□□ -2
Ccdc180J3QNE4 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC2.57□□□□□ -2
Ccdc180J3QNE4 AC153646.1-201ENSMUST00000223229 1279 ntBASIC2.57□□□□□ -2
Ccdc180J3QNE4 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.57□□□□□ -2
Ccdc180J3QNE4 Mir448-201ENSMUST00000083516 112 ntBASIC2.57□□□□□ -2
Ccdc180J3QNE4 AC164297.6-201ENSMUST00000224643 1568 ntBASIC2.56□□□□□ -2
Ccdc180J3QNE4 Gm15001-201ENSMUST00000117657 795 ntBASIC2.56□□□□□ -2
Ccdc180J3QNE4 Gm25044-201ENSMUST00000158603 104 ntBASIC2.56□□□□□ -2
Ccdc180J3QNE4 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC2.56□□□□□ -2
Ccdc180J3QNE4 Gm38167-201ENSMUST00000195704 1178 ntBASIC2.56□□□□□ -2
Ccdc180J3QNE4 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC2.56□□□□□ -2
Ccdc180J3QNE4 Gm23221-201ENSMUST00000158118 93 ntBASIC2.55□□□□□ -2
Ccdc180J3QNE4 Gm23760-201ENSMUST00000158350 116 ntBASIC2.55□□□□□ -2
Ccdc180J3QNE4 Gm25976-201ENSMUST00000158695 130 ntBASIC2.55□□□□□ -2
Ccdc180J3QNE4 Gm44478-201ENSMUST00000204875 114 ntBASIC2.55□□□□□ -2
Ccdc180J3QNE4 Olfr1193-201ENSMUST00000081697 957 ntBASIC2.55□□□□□ -2
Ccdc180J3QNE4 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Ccdc180J3QNE4 Gm37407-201ENSMUST00000194793 1316 ntBASIC2.55□□□□□ -2
Ccdc180J3QNE4 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Ccdc180J3QNE4 Gm42671-201ENSMUST00000198013 1604 ntBASIC2.54□□□□□ -2
Ccdc180J3QNE4 Gm26049-201ENSMUST00000157313 108 ntBASIC2.54□□□□□ -2
Ccdc180J3QNE4 Gm11395-201ENSMUST00000181011 499 ntBASIC2.54□□□□□ -2
Ccdc180J3QNE4 Gm43404-201ENSMUST00000200424 2534 ntBASIC2.54□□□□□ -2
Ccdc180J3QNE4 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC2.53□□□□□ -2
Ccdc180J3QNE4 Gm22603-201ENSMUST00000157603 96 ntBASIC2.53□□□□□ -2
Ccdc180J3QNE4 Gm22963-201ENSMUST00000157960 91 ntBASIC2.53□□□□□ -2
Ccdc180J3QNE4 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC2.53□□□□□ -2
Ccdc180J3QNE4 Mir7663-201ENSMUST00000183950 61 ntBASIC2.53□□□□□ -2
Ccdc180J3QNE4 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC2.53□□□□□ -2
Ccdc180J3QNE4 Gm43848-201ENSMUST00000198060 1247 ntBASIC2.53□□□□□ -2
Ccdc180J3QNE4 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC2.53□□□□□ -2
Ccdc180J3QNE4 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC2.53□□□□□ -2
Ccdc180J3QNE4 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Ccdc180J3QNE4 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Ccdc180J3QNE4 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.53□□□□□ -2
Ccdc180J3QNE4 Gm23015-201ENSMUST00000104145 128 ntBASIC2.53□□□□□ -2
Ccdc180J3QNE4 Mir3096-201ENSMUST00000116685 71 ntBASIC2.53□□□□□ -2
Ccdc180J3QNE4 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC2.53□□□□□ -2
Ccdc180J3QNE4 Gm27718-201ENSMUST00000183721 86 ntBASIC2.53□□□□□ -2
Ccdc180J3QNE4 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC2.53□□□□□ -2
Ccdc180J3QNE4 Gm44818-201ENSMUST00000206608 358 ntBASIC2.53□□□□□ -2
Ccdc180J3QNE4 Gm7751-201ENSMUST00000212868 709 ntBASIC2.53□□□□□ -2
Ccdc180J3QNE4 AC151843.1-201ENSMUST00000215960 691 ntBASIC2.53□□□□□ -2
Ccdc180J3QNE4 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Ccdc180J3QNE4 Gm15125-201ENSMUST00000116185 800 ntBASIC2.52□□□□□ -2.01
Ccdc180J3QNE4 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC2.52□□□□□ -2.01
Ccdc180J3QNE4 Gm26915-201ENSMUST00000183080 748 ntBASIC2.52□□□□□ -2.01
Ccdc180J3QNE4 Gm8151-201ENSMUST00000184817 871 ntBASIC2.52□□□□□ -2.01
Ccdc180J3QNE4 Igkv15-102-201ENSMUST00000197885 287 ntBASIC2.52□□□□□ -2.01
Ccdc180J3QNE4 Gm42506-201ENSMUST00000202009 150 ntBASIC2.52□□□□□ -2.01
Ccdc180J3QNE4 AC099612.2-201ENSMUST00000226824 721 ntBASIC2.52□□□□□ -2.01
Ccdc180J3QNE4 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Ccdc180J3QNE4 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Ccdc180J3QNE4 Gm13409-201ENSMUST00000122072 546 ntBASIC2.51□□□□□ -2.01
Ccdc180J3QNE4 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC2.51□□□□□ -2.01
Ccdc180J3QNE4 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Ccdc180J3QNE4 Gm25365-201ENSMUST00000158852 121 ntBASIC2.51□□□□□ -2.01
Ccdc180J3QNE4 Gm29475-201ENSMUST00000190767 312 ntBASIC2.51□□□□□ -2.01
Ccdc180J3QNE4 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC2.51□□□□□ -2.01
Ccdc180J3QNE4 Mir196b-201ENSMUST00000083509 85 ntBASIC2.51□□□□□ -2.01
Ccdc180J3QNE4 Gm19335-201ENSMUST00000195836 2069 ntBASIC2.51□□□□□ -2.01
Ccdc180J3QNE4 Gm42639-201ENSMUST00000197061 1871 ntBASIC2.51□□□□□ -2.01
Ccdc180J3QNE4 Gm11935-201ENSMUST00000118608 399 ntBASIC2.5□□□□□ -2.01
Ccdc180J3QNE4 Gm12706-201ENSMUST00000121588 698 ntBASIC2.5□□□□□ -2.01
Ccdc180J3QNE4 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC2.5□□□□□ -2.01
Ccdc180J3QNE4 Gm23636-201ENSMUST00000175070 95 ntBASIC2.5□□□□□ -2.01
Ccdc180J3QNE4 Gm3496-201ENSMUST00000188283 745 ntBASIC2.5□□□□□ -2.01
Ccdc180J3QNE4 Gm35570-201ENSMUST00000198730 681 ntBASIC2.5□□□□□ -2.01
Ccdc180J3QNE4 AC154426.1-201ENSMUST00000225614 1132 ntBASIC2.5□□□□□ -2.01
Ccdc180J3QNE4 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC2.5□□□□□ -2.01
Ccdc180J3QNE4 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC2.5□□□□□ -2.01
Ccdc180J3QNE4 Gm37598-201ENSMUST00000194506 1301 ntBASIC2.5□□□□□ -2.01
Ccdc180J3QNE4 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Ccdc180J3QNE4 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC2.5□□□□□ -2.01
Ccdc180J3QNE4 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Ccdc180J3QNE4 Gm43662-201ENSMUST00000198310 2271 ntBASIC2.5□□□□□ -2.01
Ccdc180J3QNE4 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Ccdc180J3QNE4 Gm14390-201ENSMUST00000117505 1695 ntBASIC2.49□□□□□ -2.01
Ccdc180J3QNE4 Gm10730-201ENSMUST00000194097 2723 ntBASIC2.49□□□□□ -2.01
Ccdc180J3QNE4 Gm11890-201ENSMUST00000119585 417 ntBASIC2.49□□□□□ -2.01
Ccdc180J3QNE4 Gm2389-201ENSMUST00000160487 189 ntBASIC2.49□□□□□ -2.01
Ccdc180J3QNE4 Gm19177-201ENSMUST00000204520 613 ntBASIC2.49□□□□□ -2.01
Ccdc180J3QNE4 Gm45048-201ENSMUST00000207058 429 ntBASIC2.49□□□□□ -2.01
Ccdc180J3QNE4 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Ccdc180J3QNE4 Mir200b-201ENSMUST00000083615 70 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms