Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Mir496a-201ENSMUST00000093627 79 ntBASIC5.11□□□□□ -1.59
NpcdF8VQB8 Gm3972-201ENSMUST00000173960 2861 ntBASIC5.11□□□□□ -1.59
NpcdF8VQB8 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
NpcdF8VQB8 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
NpcdF8VQB8 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NpcdF8VQB8 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NpcdF8VQB8 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
NpcdF8VQB8 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NpcdF8VQB8 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NpcdF8VQB8 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC5.1□□□□□ -1.59
NpcdF8VQB8 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
NpcdF8VQB8 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NpcdF8VQB8 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NpcdF8VQB8 Gm12062-201ENSMUST00000117533 259 ntBASIC5.1□□□□□ -1.59
NpcdF8VQB8 Gm15994-201ENSMUST00000118029 402 ntBASIC5.1□□□□□ -1.59
NpcdF8VQB8 Gm11794-201ENSMUST00000119446 237 ntBASIC5.1□□□□□ -1.59
NpcdF8VQB8 Gm11448-201ENSMUST00000120427 450 ntBASIC5.1□□□□□ -1.59
NpcdF8VQB8 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
NpcdF8VQB8 Fth-ps3-201ENSMUST00000210405 358 ntBASIC5.1□□□□□ -1.59
NpcdF8VQB8 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
NpcdF8VQB8 AC124772.1-201ENSMUST00000221325 151 ntBASIC5.1□□□□□ -1.59
NpcdF8VQB8 AC144772.3-201ENSMUST00000228829 3126 ntBASIC5.1□□□□□ -1.59
NpcdF8VQB8 AC155167.1-201ENSMUST00000228931 614 ntBASIC5.1□□□□□ -1.59
NpcdF8VQB8 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NpcdF8VQB8 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NpcdF8VQB8 Mir99a-201ENSMUST00000083596 65 ntBASIC5.1□□□□□ -1.59
NpcdF8VQB8 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
NpcdF8VQB8 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NpcdF8VQB8 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NpcdF8VQB8 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NpcdF8VQB8 Gm28362-201ENSMUST00000189430 2420 ntBASIC5.09□□□□□ -1.59
NpcdF8VQB8 Neat1-201ENSMUST00000173672 20771 ntBASIC5.09□□□□□ -1.59
NpcdF8VQB8 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
NpcdF8VQB8 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
NpcdF8VQB8 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC5.09□□□□□ -1.59
NpcdF8VQB8 Gm13880-201ENSMUST00000118421 474 ntBASIC5.09□□□□□ -1.59
NpcdF8VQB8 Gm15268-201ENSMUST00000118845 352 ntBASIC5.09□□□□□ -1.59
NpcdF8VQB8 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC5.09□□□□□ -1.59
NpcdF8VQB8 Gm23540-201ENSMUST00000157543 164 ntBASIC5.09□□□□□ -1.59
NpcdF8VQB8 Gm25977-201ENSMUST00000158697 85 ntBASIC5.09□□□□□ -1.59
NpcdF8VQB8 Gm9022-202ENSMUST00000183285 483 ntBASIC5.09□□□□□ -1.59
NpcdF8VQB8 Mir6993-201ENSMUST00000184912 65 ntBASIC5.09□□□□□ -1.59
NpcdF8VQB8 Gm29397-201ENSMUST00000185205 333 ntBASIC5.09□□□□□ -1.59
NpcdF8VQB8 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NpcdF8VQB8 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NpcdF8VQB8 Gm44294-201ENSMUST00000205090 728 ntBASIC5.09□□□□□ -1.59
NpcdF8VQB8 AC122397.2-201ENSMUST00000227422 686 ntBASIC5.09□□□□□ -1.59
NpcdF8VQB8 Gm23932-201ENSMUST00000082914 107 ntBASIC5.09□□□□□ -1.59
NpcdF8VQB8 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
NpcdF8VQB8 Gm43508-201ENSMUST00000197251 3783 ntBASIC5.09□□□□□ -1.59
NpcdF8VQB8 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NpcdF8VQB8 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
NpcdF8VQB8 Gm42616-201ENSMUST00000198989 4184 ntBASIC5.09□□□□□ -1.59
NpcdF8VQB8 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
NpcdF8VQB8 Gm32444-201ENSMUST00000195147 3511 ntBASIC5.09□□□□□ -1.6
NpcdF8VQB8 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
NpcdF8VQB8 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
NpcdF8VQB8 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
NpcdF8VQB8 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC5.08□□□□□ -1.6
NpcdF8VQB8 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NpcdF8VQB8 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
NpcdF8VQB8 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
NpcdF8VQB8 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
NpcdF8VQB8 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NpcdF8VQB8 Gm13378-201ENSMUST00000117483 336 ntBASIC5.08□□□□□ -1.6
NpcdF8VQB8 Gm5391-201ENSMUST00000121155 613 ntBASIC5.08□□□□□ -1.6
NpcdF8VQB8 Gm5123-201ENSMUST00000121905 837 ntBASIC5.08□□□□□ -1.6
NpcdF8VQB8 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC5.08□□□□□ -1.6
NpcdF8VQB8 Gm5755-201ENSMUST00000152394 837 ntBASIC5.08□□□□□ -1.6
NpcdF8VQB8 Gm26373-201ENSMUST00000157833 103 ntBASIC5.08□□□□□ -1.6
NpcdF8VQB8 Gm9830-201ENSMUST00000178509 357 ntBASIC5.08□□□□□ -1.6
NpcdF8VQB8 Gm37881-201ENSMUST00000193001 421 ntBASIC5.08□□□□□ -1.6
NpcdF8VQB8 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC5.08□□□□□ -1.6
NpcdF8VQB8 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
NpcdF8VQB8 Snora23-201ENSMUST00000082517 184 ntBASIC5.08□□□□□ -1.6
NpcdF8VQB8 Gm23736-201ENSMUST00000082553 75 ntBASIC5.08□□□□□ -1.6
NpcdF8VQB8 AC133079.1-201ENSMUST00000220943 1881 ntBASIC5.08□□□□□ -1.6
NpcdF8VQB8 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NpcdF8VQB8 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NpcdF8VQB8 Gm17752-201ENSMUST00000185787 3726 ntBASIC5.08□□□□□ -1.6
NpcdF8VQB8 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
NpcdF8VQB8 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
NpcdF8VQB8 Gm45223-201ENSMUST00000207037 5138 ntBASIC5.08□□□□□ -1.6
NpcdF8VQB8 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
NpcdF8VQB8 Gm9911-201ENSMUST00000211467 2802 ntBASIC5.07□□□□□ -1.6
NpcdF8VQB8 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
NpcdF8VQB8 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
NpcdF8VQB8 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
NpcdF8VQB8 Gm22115-201ENSMUST00000103976 133 ntBASIC5.07□□□□□ -1.6
NpcdF8VQB8 Gm23923-201ENSMUST00000104108 133 ntBASIC5.07□□□□□ -1.6
NpcdF8VQB8 Gm13876-201ENSMUST00000118451 261 ntBASIC5.07□□□□□ -1.6
NpcdF8VQB8 Gm12785-201ENSMUST00000122052 172 ntBASIC5.07□□□□□ -1.6
NpcdF8VQB8 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC5.07□□□□□ -1.6
NpcdF8VQB8 Gm23704-201ENSMUST00000158844 340 ntBASIC5.07□□□□□ -1.6
NpcdF8VQB8 Gm22859-201ENSMUST00000174978 122 ntBASIC5.07□□□□□ -1.6
NpcdF8VQB8 Gm25535-201ENSMUST00000175364 125 ntBASIC5.07□□□□□ -1.6
NpcdF8VQB8 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC5.07□□□□□ -1.6
NpcdF8VQB8 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC5.07□□□□□ -1.6
NpcdF8VQB8 Gm6214-201ENSMUST00000178845 541 ntBASIC5.07□□□□□ -1.6
NpcdF8VQB8 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 95 ms