Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Pcdh1F7BJK1 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Pcdh1F7BJK1 Mir466h-201ENSMUST00000104748 81 ntBASIC3.96□□□□□ -1.78
Pcdh1F7BJK1 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Pcdh1F7BJK1 Gm15783-201ENSMUST00000117521 633 ntBASIC3.96□□□□□ -1.78
Pcdh1F7BJK1 Gm11600-201ENSMUST00000119592 240 ntBASIC3.96□□□□□ -1.78
Pcdh1F7BJK1 Gm6565-201ENSMUST00000121217 438 ntBASIC3.96□□□□□ -1.78
Pcdh1F7BJK1 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC3.96□□□□□ -1.78
Pcdh1F7BJK1 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Pcdh1F7BJK1 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC3.96□□□□□ -1.78
Pcdh1F7BJK1 Gm23829-201ENSMUST00000157392 270 ntBASIC3.96□□□□□ -1.78
Pcdh1F7BJK1 Mir1946b-201ENSMUST00000157853 133 ntBASIC3.96□□□□□ -1.78
Pcdh1F7BJK1 Gm25456-201ENSMUST00000157952 109 ntBASIC3.96□□□□□ -1.78
Pcdh1F7BJK1 Gm24898-201ENSMUST00000158133 106 ntBASIC3.96□□□□□ -1.78
Pcdh1F7BJK1 Gm22243-201ENSMUST00000178754 120 ntBASIC3.96□□□□□ -1.78
Pcdh1F7BJK1 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.96□□□□□ -1.78
Pcdh1F7BJK1 Mir195b-201ENSMUST00000184814 97 ntBASIC3.96□□□□□ -1.78
Pcdh1F7BJK1 Gm37801-201ENSMUST00000194754 274 ntBASIC3.96□□□□□ -1.78
Pcdh1F7BJK1 Gm18384-201ENSMUST00000195974 808 ntBASIC3.96□□□□□ -1.78
Pcdh1F7BJK1 Gm44076-201ENSMUST00000203072 520 ntBASIC3.96□□□□□ -1.78
Pcdh1F7BJK1 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC3.96□□□□□ -1.78
Pcdh1F7BJK1 AC158622.1-201ENSMUST00000217107 230 ntBASIC3.96□□□□□ -1.78
Pcdh1F7BJK1 AC138401.1-201ENSMUST00000221533 116 ntBASIC3.96□□□□□ -1.78
Pcdh1F7BJK1 AC140477.1-201ENSMUST00000222354 246 ntBASIC3.96□□□□□ -1.78
Pcdh1F7BJK1 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC3.96□□□□□ -1.78
Pcdh1F7BJK1 Gm25482-201ENSMUST00000083225 107 ntBASIC3.96□□□□□ -1.78
Pcdh1F7BJK1 Gm23650-201ENSMUST00000083355 70 ntBASIC3.96□□□□□ -1.78
Pcdh1F7BJK1 Gm6361-201ENSMUST00000091031 435 ntBASIC3.96□□□□□ -1.78
Pcdh1F7BJK1 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC3.96□□□□□ -1.78
Pcdh1F7BJK1 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Pcdh1F7BJK1 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Pcdh1F7BJK1 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC3.96□□□□□ -1.78
Pcdh1F7BJK1 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Pcdh1F7BJK1 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 Gm5347-201ENSMUST00000210542 2327 ntBASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 Mir701-201ENSMUST00000102208 109 ntBASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 Gm23594-201ENSMUST00000104307 134 ntBASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 Gm23322-201ENSMUST00000104464 167 ntBASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 Gm16242-201ENSMUST00000117741 334 ntBASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 Gm15926-201ENSMUST00000120492 550 ntBASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 Gm11506-201ENSMUST00000122414 470 ntBASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 Gm26101-201ENSMUST00000157246 105 ntBASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 Gm24251-201ENSMUST00000157324 114 ntBASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 Gm23901-201ENSMUST00000157570 107 ntBASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 Gm23557-201ENSMUST00000157820 138 ntBASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 Gm23759-201ENSMUST00000158351 268 ntBASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 Gm25019-201ENSMUST00000179732 110 ntBASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 Mir6346-201ENSMUST00000183982 81 ntBASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 Gm43855-201ENSMUST00000197462 507 ntBASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 Gm43730-201ENSMUST00000199863 372 ntBASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 Gm44521-201ENSMUST00000206469 217 ntBASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 Gm45879-201ENSMUST00000212521 392 ntBASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 AC164567.4-201ENSMUST00000219708 483 ntBASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 Gm22220-201ENSMUST00000082671 149 ntBASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 Gm24316-201ENSMUST00000083041 107 ntBASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 Mir27a-201ENSMUST00000083510 87 ntBASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 Gm43844-201ENSMUST00000202926 5605 ntBASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC3.95□□□□□ -1.78
Pcdh1F7BJK1 AC124346.2-201ENSMUST00000217986 5083 ntBASIC3.94□□□□□ -1.78
Pcdh1F7BJK1 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Pcdh1F7BJK1 Gm15426-201ENSMUST00000117823 556 ntBASIC3.94□□□□□ -1.78
Pcdh1F7BJK1 Defa-ps15-201ENSMUST00000118178 477 ntBASIC3.94□□□□□ -1.78
Pcdh1F7BJK1 Gm12719-201ENSMUST00000118859 241 ntBASIC3.94□□□□□ -1.78
Pcdh1F7BJK1 Gm7840-201ENSMUST00000122086 533 ntBASIC3.94□□□□□ -1.78
Pcdh1F7BJK1 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
Pcdh1F7BJK1 Gm25637-201ENSMUST00000157529 107 ntBASIC3.94□□□□□ -1.78
Pcdh1F7BJK1 Gm26312-201ENSMUST00000157769 165 ntBASIC3.94□□□□□ -1.78
Pcdh1F7BJK1 Gm25454-201ENSMUST00000157947 315 ntBASIC3.94□□□□□ -1.78
Pcdh1F7BJK1 Gm26001-201ENSMUST00000157989 103 ntBASIC3.94□□□□□ -1.78
Pcdh1F7BJK1 Gm26195-201ENSMUST00000175035 101 ntBASIC3.94□□□□□ -1.78
Pcdh1F7BJK1 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC3.94□□□□□ -1.78
Pcdh1F7BJK1 Gm22259-201ENSMUST00000178926 107 ntBASIC3.94□□□□□ -1.78
Pcdh1F7BJK1 Gm27245-201ENSMUST00000184385 376 ntBASIC3.94□□□□□ -1.78
Pcdh1F7BJK1 Gm18956-201ENSMUST00000192857 480 ntBASIC3.94□□□□□ -1.78
Pcdh1F7BJK1 Gm25203-202ENSMUST00000200458 216 ntBASIC3.94□□□□□ -1.78
Pcdh1F7BJK1 CT030166.2-201ENSMUST00000222021 368 ntBASIC3.94□□□□□ -1.78
Pcdh1F7BJK1 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC3.94□□□□□ -1.78
Pcdh1F7BJK1 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Pcdh1F7BJK1 Gm5265-201ENSMUST00000076828 342 ntBASIC3.94□□□□□ -1.78
Pcdh1F7BJK1 Gm26449-201ENSMUST00000082452 104 ntBASIC3.94□□□□□ -1.78
Pcdh1F7BJK1 Gm22061-201ENSMUST00000082557 107 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms