Protein–RNA interactions for Protein: A3KGF9

Ccdc9b, Coiled-coil domain-containing protein 9B, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9bA3KGF9 Gm18520-201ENSMUST00000174783 658 ntBASIC4.39□□□□□ -1.71
Ccdc9bA3KGF9 Gm25450-201ENSMUST00000179144 107 ntBASIC4.39□□□□□ -1.71
Ccdc9bA3KGF9 Mir6344-201ENSMUST00000183462 104 ntBASIC4.39□□□□□ -1.71
Ccdc9bA3KGF9 Gm27928-201ENSMUST00000183747 256 ntBASIC4.39□□□□□ -1.71
Ccdc9bA3KGF9 Mir1957b-201ENSMUST00000184608 123 ntBASIC4.39□□□□□ -1.71
Ccdc9bA3KGF9 Gm29140-201ENSMUST00000190187 476 ntBASIC4.39□□□□□ -1.71
Ccdc9bA3KGF9 Gm37089-201ENSMUST00000195616 129 ntBASIC4.39□□□□□ -1.71
Ccdc9bA3KGF9 Gm42578-201ENSMUST00000199960 194 ntBASIC4.39□□□□□ -1.71
Ccdc9bA3KGF9 Gm34091-201ENSMUST00000200875 604 ntBASIC4.39□□□□□ -1.71
Ccdc9bA3KGF9 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC4.39□□□□□ -1.71
Ccdc9bA3KGF9 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC4.39□□□□□ -1.71
Ccdc9bA3KGF9 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC4.39□□□□□ -1.71
Ccdc9bA3KGF9 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC4.39□□□□□ -1.71
Ccdc9bA3KGF9 Gm3816-201ENSMUST00000209803 433 ntBASIC4.39□□□□□ -1.71
Ccdc9bA3KGF9 Gm45860-201ENSMUST00000212700 334 ntBASIC4.39□□□□□ -1.71
Ccdc9bA3KGF9 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Ccdc9bA3KGF9 AC183096.1-201ENSMUST00000226392 130 ntBASIC4.39□□□□□ -1.71
Ccdc9bA3KGF9 Gm26457-201ENSMUST00000082678 78 ntBASIC4.39□□□□□ -1.71
Ccdc9bA3KGF9 Gm42910-201ENSMUST00000198917 2921 ntBASIC4.39□□□□□ -1.71
Ccdc9bA3KGF9 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Ccdc9bA3KGF9 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Ccdc9bA3KGF9 Neat1-201ENSMUST00000173672 20771 ntBASIC4.39□□□□□ -1.71
Ccdc9bA3KGF9 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Ccdc9bA3KGF9 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
Ccdc9bA3KGF9 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Ccdc9bA3KGF9 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Ccdc9bA3KGF9 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
Ccdc9bA3KGF9 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Ccdc9bA3KGF9 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Ccdc9bA3KGF9 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
Ccdc9bA3KGF9 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Ccdc9bA3KGF9 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4.38□□□□□ -1.71
Ccdc9bA3KGF9 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC4.38□□□□□ -1.71
Ccdc9bA3KGF9 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC4.38□□□□□ -1.71
Ccdc9bA3KGF9 Gm23193-201ENSMUST00000102427 82 ntBASIC4.38□□□□□ -1.71
Ccdc9bA3KGF9 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Ccdc9bA3KGF9 Gm12417-201ENSMUST00000119153 403 ntBASIC4.38□□□□□ -1.71
Ccdc9bA3KGF9 Gm26479-201ENSMUST00000122620 106 ntBASIC4.38□□□□□ -1.71
Ccdc9bA3KGF9 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.38□□□□□ -1.71
Ccdc9bA3KGF9 Gm2182-201ENSMUST00000145243 663 ntBASIC4.38□□□□□ -1.71
Ccdc9bA3KGF9 Nron-204ENSMUST00000158971 370 ntBASIC4.38□□□□□ -1.71
Ccdc9bA3KGF9 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Ccdc9bA3KGF9 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Ccdc9bA3KGF9 Gm27421-201ENSMUST00000184729 167 ntBASIC4.38□□□□□ -1.71
Ccdc9bA3KGF9 Gm9134-201ENSMUST00000193186 551 ntBASIC4.38□□□□□ -1.71
Ccdc9bA3KGF9 Gm37558-201ENSMUST00000193684 2983 ntBASIC4.38□□□□□ -1.71
Ccdc9bA3KGF9 Gm42694-201ENSMUST00000196951 358 ntBASIC4.38□□□□□ -1.71
Ccdc9bA3KGF9 Gm5876-201ENSMUST00000203735 243 ntBASIC4.38□□□□□ -1.71
Ccdc9bA3KGF9 Gm17811-201ENSMUST00000206193 387 ntBASIC4.38□□□□□ -1.71
Ccdc9bA3KGF9 Gm45236-201ENSMUST00000208632 229 ntBASIC4.38□□□□□ -1.71
Ccdc9bA3KGF9 AC074315.1-201ENSMUST00000228801 214 ntBASIC4.38□□□□□ -1.71
Ccdc9bA3KGF9 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Ccdc9bA3KGF9 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Ccdc9bA3KGF9 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Ccdc9bA3KGF9 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Ccdc9bA3KGF9 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.38□□□□□ -1.71
Ccdc9bA3KGF9 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Ccdc9bA3KGF9 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Ccdc9bA3KGF9 Gm43329-201ENSMUST00000200120 3232 ntBASIC4.37□□□□□ -1.71
Ccdc9bA3KGF9 Gm12080-201ENSMUST00000119821 1883 ntBASIC4.37□□□□□ -1.71
Ccdc9bA3KGF9 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Ccdc9bA3KGF9 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
Ccdc9bA3KGF9 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Ccdc9bA3KGF9 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC4.37□□□□□ -1.71
Ccdc9bA3KGF9 Gm24113-201ENSMUST00000157477 276 ntBASIC4.37□□□□□ -1.71
Ccdc9bA3KGF9 Gm26045-201ENSMUST00000157862 97 ntBASIC4.37□□□□□ -1.71
Ccdc9bA3KGF9 Gm24885-201ENSMUST00000158783 270 ntBASIC4.37□□□□□ -1.71
Ccdc9bA3KGF9 Gm25235-201ENSMUST00000179933 107 ntBASIC4.37□□□□□ -1.71
Ccdc9bA3KGF9 Gm27545-201ENSMUST00000184755 202 ntBASIC4.37□□□□□ -1.71
Ccdc9bA3KGF9 Gm27564-201ENSMUST00000185196 96 ntBASIC4.37□□□□□ -1.71
Ccdc9bA3KGF9 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Ccdc9bA3KGF9 Gm9442-201ENSMUST00000194242 319 ntBASIC4.37□□□□□ -1.71
Ccdc9bA3KGF9 Gm6105-201ENSMUST00000200580 624 ntBASIC4.37□□□□□ -1.71
Ccdc9bA3KGF9 Gm45651-201ENSMUST00000210857 335 ntBASIC4.37□□□□□ -1.71
Ccdc9bA3KGF9 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC4.37□□□□□ -1.71
Ccdc9bA3KGF9 AC145736.2-201ENSMUST00000216305 365 ntBASIC4.37□□□□□ -1.71
Ccdc9bA3KGF9 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC4.37□□□□□ -1.71
Ccdc9bA3KGF9 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Ccdc9bA3KGF9 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
Ccdc9bA3KGF9 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
Ccdc9bA3KGF9 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Ccdc9bA3KGF9 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Ccdc9bA3KGF9 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Ccdc9bA3KGF9 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Ccdc9bA3KGF9 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Ccdc9bA3KGF9 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
Ccdc9bA3KGF9 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC4.36□□□□□ -1.71
Ccdc9bA3KGF9 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Ccdc9bA3KGF9 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Ccdc9bA3KGF9 Gm7957-201ENSMUST00000207404 2602 ntBASIC4.36□□□□□ -1.71
Ccdc9bA3KGF9 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
Ccdc9bA3KGF9 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Ccdc9bA3KGF9 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC4.36□□□□□ -1.71
Ccdc9bA3KGF9 Gm14838-201ENSMUST00000118913 248 ntBASIC4.36□□□□□ -1.71
Ccdc9bA3KGF9 Gm11456-201ENSMUST00000121070 256 ntBASIC4.36□□□□□ -1.71
Ccdc9bA3KGF9 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC4.36□□□□□ -1.71
Ccdc9bA3KGF9 Gm14846-201ENSMUST00000121868 216 ntBASIC4.36□□□□□ -1.71
Ccdc9bA3KGF9 Gm24371-201ENSMUST00000122662 267 ntBASIC4.36□□□□□ -1.71
Ccdc9bA3KGF9 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Ccdc9bA3KGF9 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC4.36□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms