Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
Msh5Q9QUM7 AC153969.1-201ENSMUST00000214047 2605 ntBASIC5.59□□□□□ -1.51
Msh5Q9QUM7 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
Msh5Q9QUM7 Gm23907-201ENSMUST00000104595 189 ntBASIC5.59□□□□□ -1.51
Msh5Q9QUM7 Mir466f-4-201ENSMUST00000116930 121 ntBASIC5.59□□□□□ -1.51
Msh5Q9QUM7 Gm11774-201ENSMUST00000118601 293 ntBASIC5.59□□□□□ -1.51
Msh5Q9QUM7 Gm12244-201ENSMUST00000119500 291 ntBASIC5.59□□□□□ -1.51
Msh5Q9QUM7 Gm22959-201ENSMUST00000122514 303 ntBASIC5.59□□□□□ -1.51
Msh5Q9QUM7 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Msh5Q9QUM7 Gm25459-201ENSMUST00000157953 114 ntBASIC5.59□□□□□ -1.51
Msh5Q9QUM7 Gm25660-201ENSMUST00000158470 104 ntBASIC5.59□□□□□ -1.51
Msh5Q9QUM7 Gm25445-201ENSMUST00000158996 299 ntBASIC5.59□□□□□ -1.51
Msh5Q9QUM7 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC5.59□□□□□ -1.51
Msh5Q9QUM7 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC5.59□□□□□ -1.51
Msh5Q9QUM7 Gm27679-201ENSMUST00000184612 84 ntBASIC5.59□□□□□ -1.51
Msh5Q9QUM7 Gm27753-201ENSMUST00000184742 203 ntBASIC5.59□□□□□ -1.51
Msh5Q9QUM7 Gm28848-201ENSMUST00000189984 168 ntBASIC5.59□□□□□ -1.51
Msh5Q9QUM7 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC5.59□□□□□ -1.51
Msh5Q9QUM7 Gm34768-201ENSMUST00000193884 565 ntBASIC5.59□□□□□ -1.51
Msh5Q9QUM7 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC5.59□□□□□ -1.51
Msh5Q9QUM7 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Msh5Q9QUM7 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC5.59□□□□□ -1.51
Msh5Q9QUM7 AC124104.1-201ENSMUST00000226279 417 ntBASIC5.59□□□□□ -1.51
Msh5Q9QUM7 Gm25797-201ENSMUST00000082640 107 ntBASIC5.59□□□□□ -1.51
Msh5Q9QUM7 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Msh5Q9QUM7 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Msh5Q9QUM7 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Msh5Q9QUM7 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
Msh5Q9QUM7 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Msh5Q9QUM7 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
Msh5Q9QUM7 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.52
Msh5Q9QUM7 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Msh5Q9QUM7 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Msh5Q9QUM7 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Msh5Q9QUM7 AC167360.1-201ENSMUST00000222596 2494 ntBASIC5.58□□□□□ -1.52
Msh5Q9QUM7 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Msh5Q9QUM7 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Msh5Q9QUM7 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Msh5Q9QUM7 Gm37686-201ENSMUST00000194099 2309 ntBASIC5.58□□□□□ -1.52
Msh5Q9QUM7 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Msh5Q9QUM7 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Msh5Q9QUM7 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
Msh5Q9QUM7 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Msh5Q9QUM7 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Msh5Q9QUM7 Gm11826-201ENSMUST00000118781 438 ntBASIC5.58□□□□□ -1.52
Msh5Q9QUM7 Gm12719-201ENSMUST00000118859 241 ntBASIC5.58□□□□□ -1.52
Msh5Q9QUM7 Gm11894-201ENSMUST00000121579 328 ntBASIC5.58□□□□□ -1.52
Msh5Q9QUM7 n-R5s24-201ENSMUST00000122518 117 ntBASIC5.58□□□□□ -1.52
Msh5Q9QUM7 n-R5s150-201ENSMUST00000122705 108 ntBASIC5.58□□□□□ -1.52
Msh5Q9QUM7 Gm24477-201ENSMUST00000157438 103 ntBASIC5.58□□□□□ -1.52
Msh5Q9QUM7 Gm23641-201ENSMUST00000157857 101 ntBASIC5.58□□□□□ -1.52
Msh5Q9QUM7 Gm22210-201ENSMUST00000158101 144 ntBASIC5.58□□□□□ -1.52
Msh5Q9QUM7 Gm23196-201ENSMUST00000158806 107 ntBASIC5.58□□□□□ -1.52
Msh5Q9QUM7 Gm27030-201ENSMUST00000182551 464 ntBASIC5.58□□□□□ -1.52
Msh5Q9QUM7 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC5.58□□□□□ -1.52
Msh5Q9QUM7 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC5.58□□□□□ -1.52
Msh5Q9QUM7 Gm45543-201ENSMUST00000209327 88 ntBASIC5.58□□□□□ -1.52
Msh5Q9QUM7 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC5.58□□□□□ -1.52
Msh5Q9QUM7 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC5.58□□□□□ -1.52
Msh5Q9QUM7 mt-Tv-201ENSMUST00000082389 69 ntBASIC5.58□□□□□ -1.52
Msh5Q9QUM7 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
Msh5Q9QUM7 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Msh5Q9QUM7 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
Msh5Q9QUM7 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Msh5Q9QUM7 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Msh5Q9QUM7 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Msh5Q9QUM7 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Msh5Q9QUM7 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Msh5Q9QUM7 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Msh5Q9QUM7 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Msh5Q9QUM7 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
Msh5Q9QUM7 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC5.57□□□□□ -1.52
Msh5Q9QUM7 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Msh5Q9QUM7 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Msh5Q9QUM7 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Msh5Q9QUM7 Gm23492-201ENSMUST00000116837 115 ntBASIC5.57□□□□□ -1.52
Msh5Q9QUM7 Gm11367-201ENSMUST00000117802 120 ntBASIC5.57□□□□□ -1.52
Msh5Q9QUM7 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC5.57□□□□□ -1.52
Msh5Q9QUM7 Gm25382-201ENSMUST00000157811 97 ntBASIC5.57□□□□□ -1.52
Msh5Q9QUM7 Gm23112-201ENSMUST00000158606 125 ntBASIC5.57□□□□□ -1.52
Msh5Q9QUM7 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC5.57□□□□□ -1.52
Msh5Q9QUM7 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Msh5Q9QUM7 Gm43028-201ENSMUST00000202561 481 ntBASIC5.57□□□□□ -1.52
Msh5Q9QUM7 Gm40810-201ENSMUST00000219149 253 ntBASIC5.57□□□□□ -1.52
Msh5Q9QUM7 AC147101.2-201ENSMUST00000219756 184 ntBASIC5.57□□□□□ -1.52
Msh5Q9QUM7 AC124746.2-201ENSMUST00000226594 427 ntBASIC5.57□□□□□ -1.52
Msh5Q9QUM7 Gm25411-201ENSMUST00000083760 151 ntBASIC5.57□□□□□ -1.52
Msh5Q9QUM7 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Msh5Q9QUM7 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Msh5Q9QUM7 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Msh5Q9QUM7 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Msh5Q9QUM7 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Msh5Q9QUM7 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Msh5Q9QUM7 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
Msh5Q9QUM7 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Msh5Q9QUM7 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Msh5Q9QUM7 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC5.56□□□□□ -1.52
Msh5Q9QUM7 Gm37718-201ENSMUST00000191655 2631 ntBASIC5.56□□□□□ -1.52
Msh5Q9QUM7 Mir680-1-201ENSMUST00000102257 109 ntBASIC5.56□□□□□ -1.52
Msh5Q9QUM7 Snord89-201ENSMUST00000104516 110 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms