Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Vps28Q9D1C8 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Vps28Q9D1C8 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.39□□□□□ -1.87
Vps28Q9D1C8 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Vps28Q9D1C8 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Vps28Q9D1C8 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.39□□□□□ -1.87
Vps28Q9D1C8 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Vps28Q9D1C8 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Vps28Q9D1C8 Gm42659-201ENSMUST00000196955 1754 ntBASIC3.39□□□□□ -1.87
Vps28Q9D1C8 Mir673-201ENSMUST00000102361 91 ntBASIC3.39□□□□□ -1.87
Vps28Q9D1C8 Gm22115-201ENSMUST00000103976 133 ntBASIC3.39□□□□□ -1.87
Vps28Q9D1C8 Gm23923-201ENSMUST00000104108 133 ntBASIC3.39□□□□□ -1.87
Vps28Q9D1C8 Gm3940-201ENSMUST00000105087 432 ntBASIC3.39□□□□□ -1.87
Vps28Q9D1C8 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.39□□□□□ -1.87
Vps28Q9D1C8 Gm22452-201ENSMUST00000122804 104 ntBASIC3.39□□□□□ -1.87
Vps28Q9D1C8 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC3.39□□□□□ -1.87
Vps28Q9D1C8 Gm26100-201ENSMUST00000157245 127 ntBASIC3.39□□□□□ -1.87
Vps28Q9D1C8 Gm22290-201ENSMUST00000177655 107 ntBASIC3.39□□□□□ -1.87
Vps28Q9D1C8 Gm22583-201ENSMUST00000178031 107 ntBASIC3.39□□□□□ -1.87
Vps28Q9D1C8 Gm18486-201ENSMUST00000184040 298 ntBASIC3.39□□□□□ -1.87
Vps28Q9D1C8 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC3.39□□□□□ -1.87
Vps28Q9D1C8 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC3.39□□□□□ -1.87
Vps28Q9D1C8 Gm28314-201ENSMUST00000191276 345 ntBASIC3.39□□□□□ -1.87
Vps28Q9D1C8 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.39□□□□□ -1.87
Vps28Q9D1C8 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.39□□□□□ -1.87
Vps28Q9D1C8 Gm17890-201ENSMUST00000221419 757 ntBASIC3.39□□□□□ -1.87
Vps28Q9D1C8 AC113031.5-201ENSMUST00000227116 606 ntBASIC3.39□□□□□ -1.87
Vps28Q9D1C8 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.39□□□□□ -1.87
Vps28Q9D1C8 Gm5670-201ENSMUST00000093546 372 ntBASIC3.39□□□□□ -1.87
Vps28Q9D1C8 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Vps28Q9D1C8 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Vps28Q9D1C8 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.39□□□□□ -1.87
Vps28Q9D1C8 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Vps28Q9D1C8 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Vps28Q9D1C8 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Vps28Q9D1C8 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Vps28Q9D1C8 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.38□□□□□ -1.87
Vps28Q9D1C8 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Vps28Q9D1C8 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Vps28Q9D1C8 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Vps28Q9D1C8 Gm24127-201ENSMUST00000104110 130 ntBASIC3.38□□□□□ -1.87
Vps28Q9D1C8 Gm17132-201ENSMUST00000109542 1158 ntBASIC3.38□□□□□ -1.87
Vps28Q9D1C8 Gm22709-201ENSMUST00000116893 111 ntBASIC3.38□□□□□ -1.87
Vps28Q9D1C8 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.38□□□□□ -1.87
Vps28Q9D1C8 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.38□□□□□ -1.87
Vps28Q9D1C8 Gm14918-201ENSMUST00000118153 268 ntBASIC3.38□□□□□ -1.87
Vps28Q9D1C8 Gm13541-201ENSMUST00000119519 283 ntBASIC3.38□□□□□ -1.87
Vps28Q9D1C8 Gm23212-201ENSMUST00000122718 60 ntBASIC3.38□□□□□ -1.87
Vps28Q9D1C8 Gm24784-201ENSMUST00000157640 62 ntBASIC3.38□□□□□ -1.87
Vps28Q9D1C8 Gm27028-201ENSMUST00000182303 399 ntBASIC3.38□□□□□ -1.87
Vps28Q9D1C8 Gm37104-201ENSMUST00000193278 196 ntBASIC3.38□□□□□ -1.87
Vps28Q9D1C8 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.38□□□□□ -1.87
Vps28Q9D1C8 Gm43804-201ENSMUST00000198280 456 ntBASIC3.38□□□□□ -1.87
Vps28Q9D1C8 Gm42475-201ENSMUST00000201212 295 ntBASIC3.38□□□□□ -1.87
Vps28Q9D1C8 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Vps28Q9D1C8 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC3.38□□□□□ -1.87
Vps28Q9D1C8 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.38□□□□□ -1.87
Vps28Q9D1C8 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.38□□□□□ -1.87
Vps28Q9D1C8 AC142499.1-201ENSMUST00000220036 374 ntBASIC3.38□□□□□ -1.87
Vps28Q9D1C8 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.38□□□□□ -1.87
Vps28Q9D1C8 AC157654.1-201ENSMUST00000224130 820 ntBASIC3.38□□□□□ -1.87
Vps28Q9D1C8 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.38□□□□□ -1.87
Vps28Q9D1C8 AC154262.1-201ENSMUST00000225976 286 ntBASIC3.38□□□□□ -1.87
Vps28Q9D1C8 AC102291.2-201ENSMUST00000228083 367 ntBASIC3.38□□□□□ -1.87
Vps28Q9D1C8 AC131029.2-202ENSMUST00000228430 496 ntBASIC3.38□□□□□ -1.87
Vps28Q9D1C8 Gm9765-201ENSMUST00000043170 321 ntBASIC3.38□□□□□ -1.87
Vps28Q9D1C8 Gm25411-201ENSMUST00000083760 151 ntBASIC3.38□□□□□ -1.87
Vps28Q9D1C8 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Vps28Q9D1C8 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Vps28Q9D1C8 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Vps28Q9D1C8 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Vps28Q9D1C8 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Vps28Q9D1C8 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
Vps28Q9D1C8 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.37□□□□□ -1.87
Vps28Q9D1C8 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Vps28Q9D1C8 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC3.37□□□□□ -1.87
Vps28Q9D1C8 AC137842.3-201ENSMUST00000228855 2397 ntBASIC3.37□□□□□ -1.87
Vps28Q9D1C8 Gm6274-201ENSMUST00000118173 797 ntBASIC3.37□□□□□ -1.87
Vps28Q9D1C8 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.37□□□□□ -1.87
Vps28Q9D1C8 Gm15760-201ENSMUST00000119553 283 ntBASIC3.37□□□□□ -1.87
Vps28Q9D1C8 Gm15266-201ENSMUST00000119635 255 ntBASIC3.37□□□□□ -1.87
Vps28Q9D1C8 Gm14049-201ENSMUST00000121009 636 ntBASIC3.37□□□□□ -1.87
Vps28Q9D1C8 Gm13424-201ENSMUST00000122301 354 ntBASIC3.37□□□□□ -1.87
Vps28Q9D1C8 Gm26020-201ENSMUST00000122729 183 ntBASIC3.37□□□□□ -1.87
Vps28Q9D1C8 Gm23028-201ENSMUST00000158773 265 ntBASIC3.37□□□□□ -1.87
Vps28Q9D1C8 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC3.37□□□□□ -1.87
Vps28Q9D1C8 Gm4540-201ENSMUST00000170669 429 ntBASIC3.37□□□□□ -1.87
Vps28Q9D1C8 Gm29073-201ENSMUST00000185563 664 ntBASIC3.37□□□□□ -1.87
Vps28Q9D1C8 Gm29165-201ENSMUST00000190655 664 ntBASIC3.37□□□□□ -1.87
Vps28Q9D1C8 Gm29211-201ENSMUST00000191470 664 ntBASIC3.37□□□□□ -1.87
Vps28Q9D1C8 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC3.37□□□□□ -1.87
Vps28Q9D1C8 Gm43415-201ENSMUST00000201934 750 ntBASIC3.37□□□□□ -1.87
Vps28Q9D1C8 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC3.37□□□□□ -1.87
Vps28Q9D1C8 Gm6012-201ENSMUST00000210821 730 ntBASIC3.37□□□□□ -1.87
Vps28Q9D1C8 Gm18414-201ENSMUST00000210858 694 ntBASIC3.37□□□□□ -1.87
Vps28Q9D1C8 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Vps28Q9D1C8 AC116726.2-201ENSMUST00000217629 986 ntBASIC3.37□□□□□ -1.87
Vps28Q9D1C8 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.37□□□□□ -1.87
Vps28Q9D1C8 AC173482.2-201ENSMUST00000224044 750 ntBASIC3.37□□□□□ -1.87
Vps28Q9D1C8 AC183092.2-201ENSMUST00000225542 1153 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms