Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm36866-201ENSMUST00000193343 657 ntBASIC4.05□□□□□ -1.76
Ddx56Q9D0R4 Gm36047-201ENSMUST00000193659 657 ntBASIC4.05□□□□□ -1.76
Ddx56Q9D0R4 Gm20857-201ENSMUST00000194766 657 ntBASIC4.05□□□□□ -1.76
Ddx56Q9D0R4 Gm20858-201ENSMUST00000195459 657 ntBASIC4.05□□□□□ -1.76
Ddx56Q9D0R4 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC4.05□□□□□ -1.76
Ddx56Q9D0R4 Gm17951-201ENSMUST00000198536 496 ntBASIC4.05□□□□□ -1.76
Ddx56Q9D0R4 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC4.05□□□□□ -1.76
Ddx56Q9D0R4 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Ddx56Q9D0R4 Gm44060-201ENSMUST00000204440 410 ntBASIC4.05□□□□□ -1.76
Ddx56Q9D0R4 Gm5358-201ENSMUST00000212814 353 ntBASIC4.05□□□□□ -1.76
Ddx56Q9D0R4 Olfr936-202ENSMUST00000216912 937 ntBASIC4.05□□□□□ -1.76
Ddx56Q9D0R4 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC4.05□□□□□ -1.76
Ddx56Q9D0R4 Gm46369-201ENSMUST00000221577 401 ntBASIC4.05□□□□□ -1.76
Ddx56Q9D0R4 AC129219.3-201ENSMUST00000223790 196 ntBASIC4.05□□□□□ -1.76
Ddx56Q9D0R4 AC158392.2-201ENSMUST00000225402 969 ntBASIC4.05□□□□□ -1.76
Ddx56Q9D0R4 Gm7099-201ENSMUST00000080066 554 ntBASIC4.05□□□□□ -1.76
Ddx56Q9D0R4 Gm25800-201ENSMUST00000082636 134 ntBASIC4.05□□□□□ -1.76
Ddx56Q9D0R4 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
Ddx56Q9D0R4 AC121997.2-203ENSMUST00000228613 4192 ntBASIC4.05□□□□□ -1.76
Ddx56Q9D0R4 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm14390-201ENSMUST00000117505 1695 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Snord116l9-201ENSMUST00000101891 94 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm26504-201ENSMUST00000102033 94 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm22936-201ENSMUST00000103955 126 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm22269-201ENSMUST00000104002 130 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm13331-201ENSMUST00000117500 448 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm14299-201ENSMUST00000117586 397 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm14753-201ENSMUST00000118503 246 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm23704-201ENSMUST00000158844 340 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm25999-201ENSMUST00000175398 133 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm18588-201ENSMUST00000177308 492 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm26502-201ENSMUST00000177732 94 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Snord116l13-201ENSMUST00000177737 94 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm25350-201ENSMUST00000177849 94 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Snord116l15-201ENSMUST00000177940 94 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm23446-201ENSMUST00000177977 94 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Snord116l4-201ENSMUST00000177982 94 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm26201-201ENSMUST00000178047 94 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm24711-201ENSMUST00000178062 94 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm24609-201ENSMUST00000178166 94 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm23265-201ENSMUST00000178321 94 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm22812-201ENSMUST00000178329 94 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Snord116l3-201ENSMUST00000178370 94 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm26246-201ENSMUST00000178388 94 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm25155-201ENSMUST00000178450 94 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm24760-201ENSMUST00000178530 94 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm22285-201ENSMUST00000178576 94 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm22417-201ENSMUST00000178656 94 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Snord116l2-201ENSMUST00000178675 94 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm26270-201ENSMUST00000178690 94 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Snord116l16-201ENSMUST00000178777 94 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm23313-201ENSMUST00000178931 94 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Snord116l17-201ENSMUST00000178936 94 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm23089-201ENSMUST00000178947 94 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Snord116l10-201ENSMUST00000179053 94 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm24153-201ENSMUST00000179280 94 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm25597-201ENSMUST00000179388 94 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Snord116l1-201ENSMUST00000179518 94 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm25816-201ENSMUST00000179764 94 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Snord116l8-201ENSMUST00000179889 94 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Snord116l7-201ENSMUST00000179895 94 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Snord116l5-201ENSMUST00000179927 94 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Snord116l6-201ENSMUST00000179955 94 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm26188-201ENSMUST00000179963 94 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm26433-201ENSMUST00000180227 94 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Snord116l11-201ENSMUST00000180312 94 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm22128-201ENSMUST00000180346 94 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm26622-201ENSMUST00000180520 298 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Mir6335-201ENSMUST00000184081 98 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm37603-201ENSMUST00000192368 219 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm33354-201ENSMUST00000195448 906 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm38088-201ENSMUST00000195829 241 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm5034-201ENSMUST00000199115 634 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm18015-201ENSMUST00000214879 316 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm24037-201ENSMUST00000082871 180 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm3867-201ENSMUST00000086108 279 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC4.04□□□□□ -1.76
Ddx56Q9D0R4 Gm9911-201ENSMUST00000211467 2802 ntBASIC4.03□□□□□ -1.76
Ddx56Q9D0R4 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms