Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Gm14008-201ENSMUST00000120483 274 ntBASIC2.12□□□□□ -2.07
StrcQ8VIM6 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC2.12□□□□□ -2.07
StrcQ8VIM6 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC2.12□□□□□ -2.07
StrcQ8VIM6 Gm28200-201ENSMUST00000187778 315 ntBASIC2.12□□□□□ -2.07
StrcQ8VIM6 Gm29378-201ENSMUST00000188723 315 ntBASIC2.12□□□□□ -2.07
StrcQ8VIM6 Gm28909-201ENSMUST00000189406 315 ntBASIC2.12□□□□□ -2.07
StrcQ8VIM6 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC2.12□□□□□ -2.07
StrcQ8VIM6 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
StrcQ8VIM6 Gm43911-201ENSMUST00000203097 76 ntBASIC2.12□□□□□ -2.07
StrcQ8VIM6 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
StrcQ8VIM6 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC2.12□□□□□ -2.07
StrcQ8VIM6 Gm17872-201ENSMUST00000222550 532 ntBASIC2.12□□□□□ -2.07
StrcQ8VIM6 AC174797.4-201ENSMUST00000225510 347 ntBASIC2.12□□□□□ -2.07
StrcQ8VIM6 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
StrcQ8VIM6 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
StrcQ8VIM6 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
StrcQ8VIM6 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
StrcQ8VIM6 Gm26396-201ENSMUST00000104093 132 ntBASIC2.12□□□□□ -2.07
StrcQ8VIM6 Gm25170-201ENSMUST00000104191 129 ntBASIC2.12□□□□□ -2.07
StrcQ8VIM6 Gm25728-201ENSMUST00000104525 159 ntBASIC2.12□□□□□ -2.07
StrcQ8VIM6 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC2.12□□□□□ -2.07
StrcQ8VIM6 Gm19177-201ENSMUST00000204520 613 ntBASIC2.12□□□□□ -2.07
StrcQ8VIM6 AC154851.2-201ENSMUST00000222172 644 ntBASIC2.12□□□□□ -2.07
StrcQ8VIM6 CT009510.2-203ENSMUST00000226704 2136 ntBASIC2.12□□□□□ -2.07
StrcQ8VIM6 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
StrcQ8VIM6 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
StrcQ8VIM6 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
StrcQ8VIM6 Gm25274-201ENSMUST00000104296 135 ntBASIC2.11□□□□□ -2.07
StrcQ8VIM6 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC2.11□□□□□ -2.07
StrcQ8VIM6 Gm11965-201ENSMUST00000122017 277 ntBASIC2.11□□□□□ -2.07
StrcQ8VIM6 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
StrcQ8VIM6 Gm27233-201ENSMUST00000184030 307 ntBASIC2.11□□□□□ -2.07
StrcQ8VIM6 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
StrcQ8VIM6 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
StrcQ8VIM6 Gm7984-201ENSMUST00000060640 538 ntBASIC2.11□□□□□ -2.07
StrcQ8VIM6 Gm26226-201ENSMUST00000082509 116 ntBASIC2.11□□□□□ -2.07
StrcQ8VIM6 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
StrcQ8VIM6 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
StrcQ8VIM6 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
StrcQ8VIM6 Gm14537-201ENSMUST00000117464 599 ntBASIC2.1□□□□□ -2.07
StrcQ8VIM6 Gm12401-201ENSMUST00000118435 228 ntBASIC2.1□□□□□ -2.07
StrcQ8VIM6 Gm13210-201ENSMUST00000121483 273 ntBASIC2.1□□□□□ -2.07
StrcQ8VIM6 Gm15065-201ENSMUST00000121699 273 ntBASIC2.1□□□□□ -2.07
StrcQ8VIM6 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC2.1□□□□□ -2.07
StrcQ8VIM6 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.1□□□□□ -2.07
StrcQ8VIM6 Gm29553-201ENSMUST00000189692 279 ntBASIC2.1□□□□□ -2.07
StrcQ8VIM6 Gm3489-201ENSMUST00000190083 528 ntBASIC2.1□□□□□ -2.07
StrcQ8VIM6 Gm43550-201ENSMUST00000200597 303 ntBASIC2.1□□□□□ -2.07
StrcQ8VIM6 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC2.1□□□□□ -2.07
StrcQ8VIM6 AC140210.1-201ENSMUST00000224961 534 ntBASIC2.1□□□□□ -2.07
StrcQ8VIM6 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
StrcQ8VIM6 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.1□□□□□ -2.07
StrcQ8VIM6 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC2.1□□□□□ -2.07
StrcQ8VIM6 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC2.1□□□□□ -2.07
StrcQ8VIM6 Gm28060-201ENSMUST00000191554 189 ntBASIC2.1□□□□□ -2.07
StrcQ8VIM6 Gm37455-201ENSMUST00000191993 529 ntBASIC2.1□□□□□ -2.07
StrcQ8VIM6 Gm6012-201ENSMUST00000210821 730 ntBASIC2.1□□□□□ -2.07
StrcQ8VIM6 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC2.1□□□□□ -2.07
StrcQ8VIM6 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
StrcQ8VIM6 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
StrcQ8VIM6 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
StrcQ8VIM6 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.09□□□□□ -2.07
StrcQ8VIM6 Gm22149-201ENSMUST00000104442 136 ntBASIC2.09□□□□□ -2.08
StrcQ8VIM6 Gm26301-201ENSMUST00000104813 95 ntBASIC2.09□□□□□ -2.08
StrcQ8VIM6 Gm25341-201ENSMUST00000157461 268 ntBASIC2.09□□□□□ -2.08
StrcQ8VIM6 Gm22521-201ENSMUST00000158272 134 ntBASIC2.09□□□□□ -2.08
StrcQ8VIM6 Gm27668-201ENSMUST00000184188 120 ntBASIC2.09□□□□□ -2.08
StrcQ8VIM6 Gm29658-201ENSMUST00000185404 230 ntBASIC2.09□□□□□ -2.08
StrcQ8VIM6 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.09□□□□□ -2.08
StrcQ8VIM6 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC2.09□□□□□ -2.08
StrcQ8VIM6 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
StrcQ8VIM6 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
StrcQ8VIM6 Gm37661-201ENSMUST00000191863 1550 ntBASIC2.09□□□□□ -2.08
StrcQ8VIM6 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
StrcQ8VIM6 Gm26473-201ENSMUST00000116763 127 ntBASIC2.08□□□□□ -2.08
StrcQ8VIM6 Gm23336-201ENSMUST00000117023 123 ntBASIC2.08□□□□□ -2.08
StrcQ8VIM6 Gm12926-201ENSMUST00000121158 409 ntBASIC2.08□□□□□ -2.08
StrcQ8VIM6 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC2.08□□□□□ -2.08
StrcQ8VIM6 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
StrcQ8VIM6 Gm37417-201ENSMUST00000195257 454 ntBASIC2.08□□□□□ -2.08
StrcQ8VIM6 AC139186.1-201ENSMUST00000197610 94 ntBASIC2.08□□□□□ -2.08
StrcQ8VIM6 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.08□□□□□ -2.08
StrcQ8VIM6 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC2.08□□□□□ -2.08
StrcQ8VIM6 AC159246.1-201ENSMUST00000214478 249 ntBASIC2.08□□□□□ -2.08
StrcQ8VIM6 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
StrcQ8VIM6 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC2.08□□□□□ -2.08
StrcQ8VIM6 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
StrcQ8VIM6 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
StrcQ8VIM6 Gm13487-201ENSMUST00000122240 864 ntBASIC2.07□□□□□ -2.08
StrcQ8VIM6 Gm25945-201ENSMUST00000122484 135 ntBASIC2.07□□□□□ -2.08
StrcQ8VIM6 Gm8121-201ENSMUST00000153583 499 ntBASIC2.07□□□□□ -2.08
StrcQ8VIM6 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC2.07□□□□□ -2.08
StrcQ8VIM6 Gm17161-201ENSMUST00000169187 524 ntBASIC2.07□□□□□ -2.08
StrcQ8VIM6 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
StrcQ8VIM6 Gm26652-202ENSMUST00000181672 475 ntBASIC2.07□□□□□ -2.08
StrcQ8VIM6 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
StrcQ8VIM6 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
StrcQ8VIM6 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC2.07□□□□□ -2.08
StrcQ8VIM6 AC117656.3-204ENSMUST00000225656 859 ntBASIC2.07□□□□□ -2.08
StrcQ8VIM6 Gm23455-201ENSMUST00000083331 100 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 110.1 ms