Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Gm33952-201ENSMUST00000197795 408 ntBASIC4.81□□□□□ -1.64
Rpa1Q8VEE4 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Rpa1Q8VEE4 Gm4714-201ENSMUST00000203395 279 ntBASIC4.81□□□□□ -1.64
Rpa1Q8VEE4 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC4.81□□□□□ -1.64
Rpa1Q8VEE4 Gm2059-201ENSMUST00000212025 287 ntBASIC4.81□□□□□ -1.64
Rpa1Q8VEE4 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC4.81□□□□□ -1.64
Rpa1Q8VEE4 Gm18409-202ENSMUST00000220105 529 ntBASIC4.81□□□□□ -1.64
Rpa1Q8VEE4 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC4.81□□□□□ -1.64
Rpa1Q8VEE4 Gm24166-201ENSMUST00000082724 135 ntBASIC4.81□□□□□ -1.64
Rpa1Q8VEE4 Gm22997-201ENSMUST00000082845 107 ntBASIC4.81□□□□□ -1.64
Rpa1Q8VEE4 Gm23042-201ENSMUST00000083866 101 ntBASIC4.81□□□□□ -1.64
Rpa1Q8VEE4 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Rpa1Q8VEE4 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Rpa1Q8VEE4 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.81□□□□□ -1.64
Rpa1Q8VEE4 AC162938.2-205ENSMUST00000217551 2828 ntBASIC4.81□□□□□ -1.64
Rpa1Q8VEE4 AC154634.4-201ENSMUST00000226077 2665 ntBASIC4.8□□□□□ -1.64
Rpa1Q8VEE4 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Rpa1Q8VEE4 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Rpa1Q8VEE4 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Rpa1Q8VEE4 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
Rpa1Q8VEE4 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Rpa1Q8VEE4 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Rpa1Q8VEE4 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Rpa1Q8VEE4 Gm15313-201ENSMUST00000119179 282 ntBASIC4.8□□□□□ -1.64
Rpa1Q8VEE4 Defa-ps8-201ENSMUST00000120972 279 ntBASIC4.8□□□□□ -1.64
Rpa1Q8VEE4 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Rpa1Q8VEE4 Gm16218-201ENSMUST00000155424 388 ntBASIC4.8□□□□□ -1.64
Rpa1Q8VEE4 Gm23781-201ENSMUST00000157940 308 ntBASIC4.8□□□□□ -1.64
Rpa1Q8VEE4 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC4.8□□□□□ -1.64
Rpa1Q8VEE4 Mir3080-201ENSMUST00000175010 79 ntBASIC4.8□□□□□ -1.64
Rpa1Q8VEE4 Mir5110-201ENSMUST00000175537 87 ntBASIC4.8□□□□□ -1.64
Rpa1Q8VEE4 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC4.8□□□□□ -1.64
Rpa1Q8VEE4 Gm23355-201ENSMUST00000177614 107 ntBASIC4.8□□□□□ -1.64
Rpa1Q8VEE4 Gm23148-201ENSMUST00000180367 107 ntBASIC4.8□□□□□ -1.64
Rpa1Q8VEE4 Gm27952-201ENSMUST00000184748 105 ntBASIC4.8□□□□□ -1.64
Rpa1Q8VEE4 Mir7674-201ENSMUST00000184964 63 ntBASIC4.8□□□□□ -1.64
Rpa1Q8VEE4 Gm43945-201ENSMUST00000203595 754 ntBASIC4.8□□□□□ -1.64
Rpa1Q8VEE4 Gm33601-201ENSMUST00000210001 961 ntBASIC4.8□□□□□ -1.64
Rpa1Q8VEE4 AC158982.2-201ENSMUST00000226283 184 ntBASIC4.8□□□□□ -1.64
Rpa1Q8VEE4 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Rpa1Q8VEE4 Gm25258-201ENSMUST00000083049 107 ntBASIC4.8□□□□□ -1.64
Rpa1Q8VEE4 Gm25682-201ENSMUST00000083942 164 ntBASIC4.8□□□□□ -1.64
Rpa1Q8VEE4 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Rpa1Q8VEE4 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Rpa1Q8VEE4 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Rpa1Q8VEE4 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
Rpa1Q8VEE4 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Rpa1Q8VEE4 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Rpa1Q8VEE4 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Rpa1Q8VEE4 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Rpa1Q8VEE4 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Rpa1Q8VEE4 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Rpa1Q8VEE4 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Rpa1Q8VEE4 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Rpa1Q8VEE4 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC4.79□□□□□ -1.64
Rpa1Q8VEE4 Gm14971-201ENSMUST00000117980 663 ntBASIC4.79□□□□□ -1.64
Rpa1Q8VEE4 Gm14521-201ENSMUST00000119545 350 ntBASIC4.79□□□□□ -1.64
Rpa1Q8VEE4 Gm13132-201ENSMUST00000121194 472 ntBASIC4.79□□□□□ -1.64
Rpa1Q8VEE4 Gm26479-201ENSMUST00000122620 106 ntBASIC4.79□□□□□ -1.64
Rpa1Q8VEE4 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC4.79□□□□□ -1.64
Rpa1Q8VEE4 Gm24664-201ENSMUST00000158939 100 ntBASIC4.79□□□□□ -1.64
Rpa1Q8VEE4 Gm6137-201ENSMUST00000187552 578 ntBASIC4.79□□□□□ -1.64
Rpa1Q8VEE4 Gm29097-201ENSMUST00000190273 422 ntBASIC4.79□□□□□ -1.64
Rpa1Q8VEE4 Gm37089-201ENSMUST00000195616 129 ntBASIC4.79□□□□□ -1.64
Rpa1Q8VEE4 Gm43116-201ENSMUST00000199789 195 ntBASIC4.79□□□□□ -1.64
Rpa1Q8VEE4 Gm44010-201ENSMUST00000204432 331 ntBASIC4.79□□□□□ -1.64
Rpa1Q8VEE4 AC145736.2-201ENSMUST00000216305 365 ntBASIC4.79□□□□□ -1.64
Rpa1Q8VEE4 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Rpa1Q8VEE4 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC4.79□□□□□ -1.64
Rpa1Q8VEE4 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Rpa1Q8VEE4 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Rpa1Q8VEE4 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Rpa1Q8VEE4 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
Rpa1Q8VEE4 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Rpa1Q8VEE4 Gm42616-201ENSMUST00000198989 4184 ntBASIC4.79□□□□□ -1.64
Rpa1Q8VEE4 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Rpa1Q8VEE4 Gm37204-201ENSMUST00000192389 3961 ntBASIC4.79□□□□□ -1.64
Rpa1Q8VEE4 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.78□□□□□ -1.64
Rpa1Q8VEE4 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.78□□□□□ -1.64
Rpa1Q8VEE4 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.78□□□□□ -1.64
Rpa1Q8VEE4 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
Rpa1Q8VEE4 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Rpa1Q8VEE4 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.78□□□□□ -1.64
Rpa1Q8VEE4 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Rpa1Q8VEE4 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Rpa1Q8VEE4 Gm25419-201ENSMUST00000104215 191 ntBASIC4.78□□□□□ -1.64
Rpa1Q8VEE4 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Rpa1Q8VEE4 Gm13887-201ENSMUST00000119009 344 ntBASIC4.78□□□□□ -1.64
Rpa1Q8VEE4 Gm14871-201ENSMUST00000119056 194 ntBASIC4.78□□□□□ -1.64
Rpa1Q8VEE4 Gm12650-201ENSMUST00000121966 258 ntBASIC4.78□□□□□ -1.64
Rpa1Q8VEE4 Gm26001-201ENSMUST00000157989 103 ntBASIC4.78□□□□□ -1.64
Rpa1Q8VEE4 Mir6336-201ENSMUST00000183581 130 ntBASIC4.78□□□□□ -1.64
Rpa1Q8VEE4 Gm28467-201ENSMUST00000190981 318 ntBASIC4.78□□□□□ -1.64
Rpa1Q8VEE4 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC4.78□□□□□ -1.64
Rpa1Q8VEE4 Gm32222-201ENSMUST00000203296 298 ntBASIC4.78□□□□□ -1.64
Rpa1Q8VEE4 Gm18007-201ENSMUST00000205019 844 ntBASIC4.78□□□□□ -1.64
Rpa1Q8VEE4 Gm44519-201ENSMUST00000206486 122 ntBASIC4.78□□□□□ -1.64
Rpa1Q8VEE4 Gm45859-201ENSMUST00000212794 214 ntBASIC4.78□□□□□ -1.64
Rpa1Q8VEE4 Gm7422-201ENSMUST00000220115 640 ntBASIC4.78□□□□□ -1.64
Rpa1Q8VEE4 Gm22806-201ENSMUST00000082738 136 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 92.6 ms