Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Mir1927-201ENSMUST00000158579 109 ntBASIC2.31□□□□□ -2.04
Lsm1Q8VC85 Gm23473-201ENSMUST00000158883 116 ntBASIC2.31□□□□□ -2.04
Lsm1Q8VC85 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.31□□□□□ -2.04
Lsm1Q8VC85 Mir3066-201ENSMUST00000175296 83 ntBASIC2.31□□□□□ -2.04
Lsm1Q8VC85 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Lsm1Q8VC85 Gm23402-201ENSMUST00000178130 107 ntBASIC2.31□□□□□ -2.04
Lsm1Q8VC85 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Lsm1Q8VC85 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Lsm1Q8VC85 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Lsm1Q8VC85 Gm26960-201ENSMUST00000182263 412 ntBASIC2.31□□□□□ -2.04
Lsm1Q8VC85 Mir7013-201ENSMUST00000183540 72 ntBASIC2.31□□□□□ -2.04
Lsm1Q8VC85 Gm8392-201ENSMUST00000185647 835 ntBASIC2.31□□□□□ -2.04
Lsm1Q8VC85 Gm43722-201ENSMUST00000196054 124 ntBASIC2.31□□□□□ -2.04
Lsm1Q8VC85 Gm43142-201ENSMUST00000198670 361 ntBASIC2.31□□□□□ -2.04
Lsm1Q8VC85 Mir7217-201ENSMUST00000200304 62 ntBASIC2.31□□□□□ -2.04
Lsm1Q8VC85 Gm43894-201ENSMUST00000203274 688 ntBASIC2.31□□□□□ -2.04
Lsm1Q8VC85 Gm44519-201ENSMUST00000206486 122 ntBASIC2.31□□□□□ -2.04
Lsm1Q8VC85 Gm45614-201ENSMUST00000209994 721 ntBASIC2.31□□□□□ -2.04
Lsm1Q8VC85 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC2.31□□□□□ -2.04
Lsm1Q8VC85 AC160962.2-201ENSMUST00000224761 632 ntBASIC2.31□□□□□ -2.04
Lsm1Q8VC85 AC154262.1-201ENSMUST00000225976 286 ntBASIC2.31□□□□□ -2.04
Lsm1Q8VC85 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.31□□□□□ -2.04
Lsm1Q8VC85 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.31□□□□□ -2.04
Lsm1Q8VC85 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
Lsm1Q8VC85 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
Lsm1Q8VC85 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.3□□□□□ -2.04
Lsm1Q8VC85 Gm14125-201ENSMUST00000113442 680 ntBASIC2.3□□□□□ -2.04
Lsm1Q8VC85 Gm12513-201ENSMUST00000118617 352 ntBASIC2.3□□□□□ -2.04
Lsm1Q8VC85 Gm26101-201ENSMUST00000157246 105 ntBASIC2.3□□□□□ -2.04
Lsm1Q8VC85 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Lsm1Q8VC85 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC2.3□□□□□ -2.04
Lsm1Q8VC85 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Lsm1Q8VC85 Gm27220-201ENSMUST00000183453 262 ntBASIC2.3□□□□□ -2.04
Lsm1Q8VC85 Gm29184-201ENSMUST00000190038 334 ntBASIC2.3□□□□□ -2.04
Lsm1Q8VC85 Gm29516-201ENSMUST00000190402 468 ntBASIC2.3□□□□□ -2.04
Lsm1Q8VC85 Gm37557-201ENSMUST00000191640 139 ntBASIC2.3□□□□□ -2.04
Lsm1Q8VC85 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC2.3□□□□□ -2.04
Lsm1Q8VC85 Gm19089-201ENSMUST00000197207 613 ntBASIC2.3□□□□□ -2.04
Lsm1Q8VC85 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.3□□□□□ -2.04
Lsm1Q8VC85 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC2.3□□□□□ -2.04
Lsm1Q8VC85 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC2.3□□□□□ -2.04
Lsm1Q8VC85 Gm45791-201ENSMUST00000212908 352 ntBASIC2.3□□□□□ -2.04
Lsm1Q8VC85 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Lsm1Q8VC85 Gm7648-201ENSMUST00000173036 1658 ntBASIC2.3□□□□□ -2.04
Lsm1Q8VC85 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC2.3□□□□□ -2.04
Lsm1Q8VC85 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.3□□□□□ -2.04
Lsm1Q8VC85 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.3□□□□□ -2.04
Lsm1Q8VC85 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Lsm1Q8VC85 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Lsm1Q8VC85 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Lsm1Q8VC85 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Lsm1Q8VC85 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Lsm1Q8VC85 AC121598.3-201ENSMUST00000227179 1643 ntBASIC2.29□□□□□ -2.04
Lsm1Q8VC85 Gm26247-201ENSMUST00000116702 91 ntBASIC2.29□□□□□ -2.04
Lsm1Q8VC85 Mir1192-201ENSMUST00000116976 121 ntBASIC2.29□□□□□ -2.04
Lsm1Q8VC85 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC2.29□□□□□ -2.04
Lsm1Q8VC85 Gm15025-201ENSMUST00000118434 418 ntBASIC2.29□□□□□ -2.04
Lsm1Q8VC85 Gm13751-201ENSMUST00000120280 752 ntBASIC2.29□□□□□ -2.04
Lsm1Q8VC85 Gm12006-201ENSMUST00000120786 403 ntBASIC2.29□□□□□ -2.04
Lsm1Q8VC85 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
Lsm1Q8VC85 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC2.29□□□□□ -2.04
Lsm1Q8VC85 Gm26041-201ENSMUST00000158148 108 ntBASIC2.29□□□□□ -2.04
Lsm1Q8VC85 Gm22392-201ENSMUST00000177971 107 ntBASIC2.29□□□□□ -2.04
Lsm1Q8VC85 Mir6372-201ENSMUST00000185114 109 ntBASIC2.29□□□□□ -2.04
Lsm1Q8VC85 Gm17929-201ENSMUST00000186851 627 ntBASIC2.29□□□□□ -2.04
Lsm1Q8VC85 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC2.29□□□□□ -2.04
Lsm1Q8VC85 Gm6059-201ENSMUST00000196903 340 ntBASIC2.29□□□□□ -2.04
Lsm1Q8VC85 Gm44161-201ENSMUST00000203532 253 ntBASIC2.29□□□□□ -2.04
Lsm1Q8VC85 Gm44088-201ENSMUST00000204595 237 ntBASIC2.29□□□□□ -2.04
Lsm1Q8VC85 AC073947.3-201ENSMUST00000215576 766 ntBASIC2.29□□□□□ -2.04
Lsm1Q8VC85 AC157017.2-201ENSMUST00000218354 777 ntBASIC2.29□□□□□ -2.04
Lsm1Q8VC85 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Lsm1Q8VC85 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Lsm1Q8VC85 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Lsm1Q8VC85 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.29□□□□□ -2.04
Lsm1Q8VC85 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Lsm1Q8VC85 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.29□□□□□ -2.04
Lsm1Q8VC85 Gm44708-201ENSMUST00000205580 2237 ntBASIC2.29□□□□□ -2.04
Lsm1Q8VC85 Gm12443-201ENSMUST00000122308 323 ntBASIC2.28□□□□□ -2.04
Lsm1Q8VC85 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC2.28□□□□□ -2.04
Lsm1Q8VC85 Gm25153-201ENSMUST00000157118 156 ntBASIC2.28□□□□□ -2.04
Lsm1Q8VC85 Gm24771-201ENSMUST00000158508 137 ntBASIC2.28□□□□□ -2.04
Lsm1Q8VC85 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.28□□□□□ -2.04
Lsm1Q8VC85 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Lsm1Q8VC85 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC2.28□□□□□ -2.04
Lsm1Q8VC85 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC2.28□□□□□ -2.04
Lsm1Q8VC85 Trbv6-201ENSMUST00000193743 276 ntBASIC2.28□□□□□ -2.04
Lsm1Q8VC85 Gm44295-201ENSMUST00000203805 437 ntBASIC2.28□□□□□ -2.04
Lsm1Q8VC85 Gm45173-201ENSMUST00000206819 305 ntBASIC2.28□□□□□ -2.04
Lsm1Q8VC85 Gm18039-201ENSMUST00000217816 728 ntBASIC2.28□□□□□ -2.04
Lsm1Q8VC85 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.28□□□□□ -2.04
Lsm1Q8VC85 AC152979.4-201ENSMUST00000219893 379 ntBASIC2.28□□□□□ -2.04
Lsm1Q8VC85 AC134254.4-201ENSMUST00000223086 370 ntBASIC2.28□□□□□ -2.04
Lsm1Q8VC85 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.28□□□□□ -2.04
Lsm1Q8VC85 Gm22866-201ENSMUST00000083947 177 ntBASIC2.28□□□□□ -2.04
Lsm1Q8VC85 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Lsm1Q8VC85 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
Lsm1Q8VC85 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
Lsm1Q8VC85 Gm23175-201ENSMUST00000104371 132 ntBASIC2.27□□□□□ -2.05
Lsm1Q8VC85 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms