Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Ushbp1Q8R370 AC098719.1-201ENSMUST00000228920 371 ntBASIC4.28□□□□□ -1.72
Ushbp1Q8R370 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Ushbp1Q8R370 Gm23096-201ENSMUST00000083447 107 ntBASIC4.28□□□□□ -1.72
Ushbp1Q8R370 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC4.28□□□□□ -1.72
Ushbp1Q8R370 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Ushbp1Q8R370 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ushbp1Q8R370 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ushbp1Q8R370 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.73
Ushbp1Q8R370 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ushbp1Q8R370 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
Ushbp1Q8R370 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Ushbp1Q8R370 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Ushbp1Q8R370 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Ushbp1Q8R370 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Ushbp1Q8R370 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ushbp1Q8R370 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ushbp1Q8R370 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Ushbp1Q8R370 Gm12149-201ENSMUST00000117511 654 ntBASIC4.27□□□□□ -1.73
Ushbp1Q8R370 Gm15988-201ENSMUST00000118677 367 ntBASIC4.27□□□□□ -1.73
Ushbp1Q8R370 Gm12156-201ENSMUST00000119188 554 ntBASIC4.27□□□□□ -1.73
Ushbp1Q8R370 Gm12787-201ENSMUST00000119234 396 ntBASIC4.27□□□□□ -1.73
Ushbp1Q8R370 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ushbp1Q8R370 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC4.27□□□□□ -1.73
Ushbp1Q8R370 Gm26468-201ENSMUST00000158644 106 ntBASIC4.27□□□□□ -1.73
Ushbp1Q8R370 Gm24976-201ENSMUST00000158972 135 ntBASIC4.27□□□□□ -1.73
Ushbp1Q8R370 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC4.27□□□□□ -1.73
Ushbp1Q8R370 Gm21726-201ENSMUST00000179654 392 ntBASIC4.27□□□□□ -1.73
Ushbp1Q8R370 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC4.27□□□□□ -1.73
Ushbp1Q8R370 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
Ushbp1Q8R370 Gm28579-201ENSMUST00000186143 369 ntBASIC4.27□□□□□ -1.73
Ushbp1Q8R370 Gm19641-201ENSMUST00000188432 417 ntBASIC4.27□□□□□ -1.73
Ushbp1Q8R370 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC4.27□□□□□ -1.73
Ushbp1Q8R370 Gm36964-201ENSMUST00000191876 198 ntBASIC4.27□□□□□ -1.73
Ushbp1Q8R370 Ighv1-40-201ENSMUST00000194231 345 ntBASIC4.27□□□□□ -1.73
Ushbp1Q8R370 Gm29704-201ENSMUST00000196011 253 ntBASIC4.27□□□□□ -1.73
Ushbp1Q8R370 Gm42665-201ENSMUST00000202100 586 ntBASIC4.27□□□□□ -1.73
Ushbp1Q8R370 Gm20102-201ENSMUST00000222445 220 ntBASIC4.27□□□□□ -1.73
Ushbp1Q8R370 AC101945.3-201ENSMUST00000226568 153 ntBASIC4.27□□□□□ -1.73
Ushbp1Q8R370 AC115291.2-201ENSMUST00000228335 437 ntBASIC4.27□□□□□ -1.73
Ushbp1Q8R370 Gm24460-201ENSMUST00000082731 106 ntBASIC4.27□□□□□ -1.73
Ushbp1Q8R370 Gm24147-201ENSMUST00000082763 144 ntBASIC4.27□□□□□ -1.73
Ushbp1Q8R370 Gm23932-201ENSMUST00000082914 107 ntBASIC4.27□□□□□ -1.73
Ushbp1Q8R370 AC153150.1-201ENSMUST00000226065 3782 ntBASIC4.27□□□□□ -1.73
Ushbp1Q8R370 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ushbp1Q8R370 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ushbp1Q8R370 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ushbp1Q8R370 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.26□□□□□ -1.73
Ushbp1Q8R370 Gm25765-201ENSMUST00000104100 132 ntBASIC4.26□□□□□ -1.73
Ushbp1Q8R370 Gm24376-201ENSMUST00000104399 127 ntBASIC4.26□□□□□ -1.73
Ushbp1Q8R370 Gm13314-201ENSMUST00000118742 335 ntBASIC4.26□□□□□ -1.73
Ushbp1Q8R370 Gm22480-201ENSMUST00000122568 128 ntBASIC4.26□□□□□ -1.73
Ushbp1Q8R370 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC4.26□□□□□ -1.73
Ushbp1Q8R370 Gm25827-201ENSMUST00000157089 107 ntBASIC4.26□□□□□ -1.73
Ushbp1Q8R370 Gm25982-201ENSMUST00000157920 101 ntBASIC4.26□□□□□ -1.73
Ushbp1Q8R370 Gm24666-201ENSMUST00000158937 167 ntBASIC4.26□□□□□ -1.73
Ushbp1Q8R370 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ushbp1Q8R370 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC4.26□□□□□ -1.73
Ushbp1Q8R370 Gm23003-201ENSMUST00000179948 107 ntBASIC4.26□□□□□ -1.73
Ushbp1Q8R370 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC4.26□□□□□ -1.73
Ushbp1Q8R370 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC4.26□□□□□ -1.73
Ushbp1Q8R370 Gm28163-201ENSMUST00000187099 325 ntBASIC4.26□□□□□ -1.73
Ushbp1Q8R370 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ushbp1Q8R370 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC4.26□□□□□ -1.73
Ushbp1Q8R370 Gm43723-201ENSMUST00000196886 189 ntBASIC4.26□□□□□ -1.73
Ushbp1Q8R370 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Ushbp1Q8R370 Gm44989-201ENSMUST00000204749 217 ntBASIC4.26□□□□□ -1.73
Ushbp1Q8R370 Gm45162-201ENSMUST00000209013 618 ntBASIC4.26□□□□□ -1.73
Ushbp1Q8R370 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Ushbp1Q8R370 AC100590.2-201ENSMUST00000219028 215 ntBASIC4.26□□□□□ -1.73
Ushbp1Q8R370 AC153948.1-201ENSMUST00000219080 3838 ntBASIC4.26□□□□□ -1.73
Ushbp1Q8R370 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Ushbp1Q8R370 AC135019.1-201ENSMUST00000219949 307 ntBASIC4.26□□□□□ -1.73
Ushbp1Q8R370 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC4.26□□□□□ -1.73
Ushbp1Q8R370 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC4.26□□□□□ -1.73
Ushbp1Q8R370 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Ushbp1Q8R370 Gm26228-201ENSMUST00000082512 107 ntBASIC4.26□□□□□ -1.73
Ushbp1Q8R370 Gm25080-201ENSMUST00000082526 107 ntBASIC4.26□□□□□ -1.73
Ushbp1Q8R370 Gm23645-201ENSMUST00000083228 108 ntBASIC4.26□□□□□ -1.73
Ushbp1Q8R370 Mir181a-2-201ENSMUST00000083489 76 ntBASIC4.26□□□□□ -1.73
Ushbp1Q8R370 Gm25518-201ENSMUST00000083864 107 ntBASIC4.26□□□□□ -1.73
Ushbp1Q8R370 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ushbp1Q8R370 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Ushbp1Q8R370 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Ushbp1Q8R370 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC4.26□□□□□ -1.73
Ushbp1Q8R370 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ushbp1Q8R370 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ushbp1Q8R370 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ushbp1Q8R370 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ushbp1Q8R370 Gm37655-201ENSMUST00000193968 4123 ntBASIC4.26□□□□□ -1.73
Ushbp1Q8R370 Gm37176-201ENSMUST00000193300 4051 ntBASIC4.26□□□□□ -1.73
Ushbp1Q8R370 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ushbp1Q8R370 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ushbp1Q8R370 Gm37006-201ENSMUST00000195253 2674 ntBASIC4.25□□□□□ -1.73
Ushbp1Q8R370 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC4.25□□□□□ -1.73
Ushbp1Q8R370 Gm23256-201ENSMUST00000102235 110 ntBASIC4.25□□□□□ -1.73
Ushbp1Q8R370 Gm26140-201ENSMUST00000103807 110 ntBASIC4.25□□□□□ -1.73
Ushbp1Q8R370 Gm23697-201ENSMUST00000103897 110 ntBASIC4.25□□□□□ -1.73
Ushbp1Q8R370 Gm13046-201ENSMUST00000117391 501 ntBASIC4.25□□□□□ -1.73
Ushbp1Q8R370 Gm11923-201ENSMUST00000118135 508 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 98.9 ms