Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm11352-201ENSMUST00000119264 517 ntBASIC3.54□□□□□ -1.84
Nup88Q8CEC0 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC3.54□□□□□ -1.84
Nup88Q8CEC0 Gm23234-201ENSMUST00000157304 134 ntBASIC3.54□□□□□ -1.84
Nup88Q8CEC0 Gm24787-201ENSMUST00000157380 123 ntBASIC3.54□□□□□ -1.84
Nup88Q8CEC0 Gm24019-201ENSMUST00000178620 107 ntBASIC3.54□□□□□ -1.84
Nup88Q8CEC0 Gm26243-201ENSMUST00000179260 107 ntBASIC3.54□□□□□ -1.84
Nup88Q8CEC0 Snord116l12-201ENSMUST00000179816 94 ntBASIC3.54□□□□□ -1.84
Nup88Q8CEC0 Gm14596-201ENSMUST00000180268 537 ntBASIC3.54□□□□□ -1.84
Nup88Q8CEC0 Gm14595-201ENSMUST00000180335 537 ntBASIC3.54□□□□□ -1.84
Nup88Q8CEC0 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Nup88Q8CEC0 Mir6541-201ENSMUST00000183649 110 ntBASIC3.54□□□□□ -1.84
Nup88Q8CEC0 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.54□□□□□ -1.84
Nup88Q8CEC0 Gm28474-201ENSMUST00000188501 315 ntBASIC3.54□□□□□ -1.84
Nup88Q8CEC0 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC3.54□□□□□ -1.84
Nup88Q8CEC0 Gm28155-201ENSMUST00000191066 151 ntBASIC3.54□□□□□ -1.84
Nup88Q8CEC0 Gm19498-201ENSMUST00000191128 331 ntBASIC3.54□□□□□ -1.84
Nup88Q8CEC0 Nras-ps2-201ENSMUST00000195269 178 ntBASIC3.54□□□□□ -1.84
Nup88Q8CEC0 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.54□□□□□ -1.84
Nup88Q8CEC0 Gm45590-201ENSMUST00000209715 262 ntBASIC3.54□□□□□ -1.84
Nup88Q8CEC0 AC153541.1-201ENSMUST00000213786 294 ntBASIC3.54□□□□□ -1.84
Nup88Q8CEC0 AC156560.1-201ENSMUST00000221425 256 ntBASIC3.54□□□□□ -1.84
Nup88Q8CEC0 AC154329.2-201ENSMUST00000225257 383 ntBASIC3.54□□□□□ -1.84
Nup88Q8CEC0 AC183092.2-201ENSMUST00000225542 1153 ntBASIC3.54□□□□□ -1.84
Nup88Q8CEC0 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.54□□□□□ -1.84
Nup88Q8CEC0 Gm23296-201ENSMUST00000082555 107 ntBASIC3.54□□□□□ -1.84
Nup88Q8CEC0 Gm24859-201ENSMUST00000082729 107 ntBASIC3.54□□□□□ -1.84
Nup88Q8CEC0 Mir21a-201ENSMUST00000083521 92 ntBASIC3.54□□□□□ -1.84
Nup88Q8CEC0 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Nup88Q8CEC0 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Nup88Q8CEC0 Gm37983-201ENSMUST00000193207 2006 ntBASIC3.54□□□□□ -1.84
Nup88Q8CEC0 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Nup88Q8CEC0 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Nup88Q8CEC0 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
Nup88Q8CEC0 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
Nup88Q8CEC0 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Nup88Q8CEC0 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Nup88Q8CEC0 Gm12640-201ENSMUST00000120097 310 ntBASIC3.53□□□□□ -1.84
Nup88Q8CEC0 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Nup88Q8CEC0 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
Nup88Q8CEC0 Gm25373-201ENSMUST00000158156 115 ntBASIC3.53□□□□□ -1.84
Nup88Q8CEC0 Gm26215-201ENSMUST00000158584 139 ntBASIC3.53□□□□□ -1.84
Nup88Q8CEC0 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Nup88Q8CEC0 Gm18520-201ENSMUST00000174783 658 ntBASIC3.53□□□□□ -1.84
Nup88Q8CEC0 Gm23053-201ENSMUST00000175136 96 ntBASIC3.53□□□□□ -1.84
Nup88Q8CEC0 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC3.53□□□□□ -1.84
Nup88Q8CEC0 Gm24100-201ENSMUST00000178592 79 ntBASIC3.53□□□□□ -1.84
Nup88Q8CEC0 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Nup88Q8CEC0 Gm26928-201ENSMUST00000182674 572 ntBASIC3.53□□□□□ -1.84
Nup88Q8CEC0 Mir6372-201ENSMUST00000185114 109 ntBASIC3.53□□□□□ -1.84
Nup88Q8CEC0 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC3.53□□□□□ -1.84
Nup88Q8CEC0 Gm28358-202ENSMUST00000189292 223 ntBASIC3.53□□□□□ -1.84
Nup88Q8CEC0 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC3.53□□□□□ -1.84
Nup88Q8CEC0 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC3.53□□□□□ -1.84
Nup88Q8CEC0 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC3.53□□□□□ -1.84
Nup88Q8CEC0 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC3.53□□□□□ -1.84
Nup88Q8CEC0 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC3.53□□□□□ -1.84
Nup88Q8CEC0 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Nup88Q8CEC0 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.53□□□□□ -1.84
Nup88Q8CEC0 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Nup88Q8CEC0 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC3.53□□□□□ -1.85
Nup88Q8CEC0 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.85
Nup88Q8CEC0 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
Nup88Q8CEC0 AC169038.1-201ENSMUST00000227378 1352 ntBASIC3.52□□□□□ -1.85
Nup88Q8CEC0 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Nup88Q8CEC0 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC3.52□□□□□ -1.85
Nup88Q8CEC0 Gm7071-201ENSMUST00000120458 462 ntBASIC3.52□□□□□ -1.85
Nup88Q8CEC0 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC3.52□□□□□ -1.85
Nup88Q8CEC0 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC3.52□□□□□ -1.85
Nup88Q8CEC0 Gm22538-201ENSMUST00000158169 299 ntBASIC3.52□□□□□ -1.85
Nup88Q8CEC0 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Nup88Q8CEC0 Mir5129-201ENSMUST00000174938 78 ntBASIC3.52□□□□□ -1.85
Nup88Q8CEC0 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Nup88Q8CEC0 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC3.52□□□□□ -1.85
Nup88Q8CEC0 Gm28282-201ENSMUST00000186072 186 ntBASIC3.52□□□□□ -1.85
Nup88Q8CEC0 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC3.52□□□□□ -1.85
Nup88Q8CEC0 Gm42924-201ENSMUST00000197261 185 ntBASIC3.52□□□□□ -1.85
Nup88Q8CEC0 Gm44157-201ENSMUST00000204720 410 ntBASIC3.52□□□□□ -1.85
Nup88Q8CEC0 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC3.52□□□□□ -1.85
Nup88Q8CEC0 AC138667.2-201ENSMUST00000224880 598 ntBASIC3.52□□□□□ -1.85
Nup88Q8CEC0 AC158521.1-201ENSMUST00000225295 660 ntBASIC3.52□□□□□ -1.85
Nup88Q8CEC0 AC154276.2-201ENSMUST00000227707 309 ntBASIC3.52□□□□□ -1.85
Nup88Q8CEC0 AC130477.2-201ENSMUST00000228158 274 ntBASIC3.52□□□□□ -1.85
Nup88Q8CEC0 Gm7984-201ENSMUST00000060640 538 ntBASIC3.52□□□□□ -1.85
Nup88Q8CEC0 Gm22249-201ENSMUST00000082485 136 ntBASIC3.52□□□□□ -1.85
Nup88Q8CEC0 Mir19a-201ENSMUST00000083482 82 ntBASIC3.52□□□□□ -1.85
Nup88Q8CEC0 Gm24817-201ENSMUST00000093672 105 ntBASIC3.52□□□□□ -1.85
Nup88Q8CEC0 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Nup88Q8CEC0 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Nup88Q8CEC0 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Nup88Q8CEC0 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.51□□□□□ -1.85
Nup88Q8CEC0 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Nup88Q8CEC0 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.51□□□□□ -1.85
Nup88Q8CEC0 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.51□□□□□ -1.85
Nup88Q8CEC0 Gm25563-201ENSMUST00000104603 74 ntBASIC3.51□□□□□ -1.85
Nup88Q8CEC0 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Nup88Q8CEC0 Gm12393-201ENSMUST00000117084 848 ntBASIC3.51□□□□□ -1.85
Nup88Q8CEC0 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Nup88Q8CEC0 Gm11835-201ENSMUST00000120635 663 ntBASIC3.51□□□□□ -1.85
Nup88Q8CEC0 Gm13356-201ENSMUST00000121678 335 ntBASIC3.51□□□□□ -1.85
Nup88Q8CEC0 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.51□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 94.5 ms