Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm18540-201ENSMUST00000204025 526 ntBASIC5.23□□□□□ -1.57
Trim47Q8C0E3 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC5.23□□□□□ -1.57
Trim47Q8C0E3 Gm45513-201ENSMUST00000210228 376 ntBASIC5.23□□□□□ -1.57
Trim47Q8C0E3 AC115291.2-201ENSMUST00000228335 437 ntBASIC5.23□□□□□ -1.57
Trim47Q8C0E3 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC5.23□□□□□ -1.57
Trim47Q8C0E3 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.23□□□□□ -1.57
Trim47Q8C0E3 Gm43024-201ENSMUST00000196770 4352 ntBASIC5.23□□□□□ -1.57
Trim47Q8C0E3 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Trim47Q8C0E3 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Trim47Q8C0E3 Gm43654-201ENSMUST00000200664 3417 ntBASIC5.23□□□□□ -1.57
Trim47Q8C0E3 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Trim47Q8C0E3 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Trim47Q8C0E3 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Trim47Q8C0E3 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Trim47Q8C0E3 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC5.22□□□□□ -1.57
Trim47Q8C0E3 Gm36989-201ENSMUST00000193225 2160 ntBASIC5.22□□□□□ -1.57
Trim47Q8C0E3 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Trim47Q8C0E3 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Trim47Q8C0E3 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Trim47Q8C0E3 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Trim47Q8C0E3 Mir687-201ENSMUST00000102166 89 ntBASIC5.22□□□□□ -1.57
Trim47Q8C0E3 Gm23651-201ENSMUST00000116755 120 ntBASIC5.22□□□□□ -1.57
Trim47Q8C0E3 Gm12261-201ENSMUST00000117499 645 ntBASIC5.22□□□□□ -1.57
Trim47Q8C0E3 Gm12466-201ENSMUST00000121199 620 ntBASIC5.22□□□□□ -1.57
Trim47Q8C0E3 Hba-ps4-201ENSMUST00000128900 447 ntBASIC5.22□□□□□ -1.57
Trim47Q8C0E3 Gm5958-201ENSMUST00000147698 297 ntBASIC5.22□□□□□ -1.57
Trim47Q8C0E3 Gm25665-201ENSMUST00000157695 110 ntBASIC5.22□□□□□ -1.57
Trim47Q8C0E3 Gm24751-201ENSMUST00000157844 102 ntBASIC5.22□□□□□ -1.57
Trim47Q8C0E3 Gm20534-201ENSMUST00000172957 172 ntBASIC5.22□□□□□ -1.57
Trim47Q8C0E3 Gm20450-201ENSMUST00000173652 147 ntBASIC5.22□□□□□ -1.57
Trim47Q8C0E3 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC5.22□□□□□ -1.57
Trim47Q8C0E3 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC5.22□□□□□ -1.57
Trim47Q8C0E3 Mir1957b-201ENSMUST00000184608 123 ntBASIC5.22□□□□□ -1.57
Trim47Q8C0E3 Gm28389-201ENSMUST00000190090 697 ntBASIC5.22□□□□□ -1.57
Trim47Q8C0E3 Ighv1-46-201ENSMUST00000193988 351 ntBASIC5.22□□□□□ -1.57
Trim47Q8C0E3 Gm37617-201ENSMUST00000194309 159 ntBASIC5.22□□□□□ -1.57
Trim47Q8C0E3 Gm37693-201ENSMUST00000194562 234 ntBASIC5.22□□□□□ -1.57
Trim47Q8C0E3 Gm6051-201ENSMUST00000201529 352 ntBASIC5.22□□□□□ -1.57
Trim47Q8C0E3 AC130536.1-201ENSMUST00000224425 271 ntBASIC5.22□□□□□ -1.57
Trim47Q8C0E3 AC168880.2-201ENSMUST00000224488 201 ntBASIC5.22□□□□□ -1.57
Trim47Q8C0E3 AC122320.1-201ENSMUST00000227233 105 ntBASIC5.22□□□□□ -1.57
Trim47Q8C0E3 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Trim47Q8C0E3 Mir32-201ENSMUST00000083610 70 ntBASIC5.22□□□□□ -1.57
Trim47Q8C0E3 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Trim47Q8C0E3 Gm44321-201ENSMUST00000204262 2855 ntBASIC5.22□□□□□ -1.57
Trim47Q8C0E3 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Trim47Q8C0E3 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Trim47Q8C0E3 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Trim47Q8C0E3 Gm37588-201ENSMUST00000195024 2496 ntBASIC5.22□□□□□ -1.57
Trim47Q8C0E3 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Trim47Q8C0E3 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Trim47Q8C0E3 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC5.22□□□□□ -1.57
Trim47Q8C0E3 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC5.21□□□□□ -1.57
Trim47Q8C0E3 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Trim47Q8C0E3 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Trim47Q8C0E3 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Trim47Q8C0E3 Gm8744-201ENSMUST00000204475 3581 ntBASIC5.21□□□□□ -1.58
Trim47Q8C0E3 Gm12112-201ENSMUST00000117772 231 ntBASIC5.21□□□□□ -1.58
Trim47Q8C0E3 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC5.21□□□□□ -1.58
Trim47Q8C0E3 Gm20651-201ENSMUST00000177219 329 ntBASIC5.21□□□□□ -1.58
Trim47Q8C0E3 Gm19898-201ENSMUST00000177490 251 ntBASIC5.21□□□□□ -1.58
Trim47Q8C0E3 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC5.21□□□□□ -1.58
Trim47Q8C0E3 Gm3145-201ENSMUST00000188584 220 ntBASIC5.21□□□□□ -1.58
Trim47Q8C0E3 Gm28872-201ENSMUST00000191518 158 ntBASIC5.21□□□□□ -1.58
Trim47Q8C0E3 Gm37659-201ENSMUST00000194574 111 ntBASIC5.21□□□□□ -1.58
Trim47Q8C0E3 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC5.21□□□□□ -1.58
Trim47Q8C0E3 Gm3338-201ENSMUST00000220982 269 ntBASIC5.21□□□□□ -1.58
Trim47Q8C0E3 AC166830.2-201ENSMUST00000225821 196 ntBASIC5.21□□□□□ -1.58
Trim47Q8C0E3 Gm22685-201ENSMUST00000082848 106 ntBASIC5.21□□□□□ -1.58
Trim47Q8C0E3 Gm26055-201ENSMUST00000083038 107 ntBASIC5.21□□□□□ -1.58
Trim47Q8C0E3 n-R5s50-201ENSMUST00000083168 111 ntBASIC5.21□□□□□ -1.58
Trim47Q8C0E3 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Trim47Q8C0E3 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Trim47Q8C0E3 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Trim47Q8C0E3 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Trim47Q8C0E3 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
Trim47Q8C0E3 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Trim47Q8C0E3 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Trim47Q8C0E3 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Trim47Q8C0E3 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Trim47Q8C0E3 AC113059.3-201ENSMUST00000217423 2777 ntBASIC5.21□□□□□ -1.58
Trim47Q8C0E3 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Trim47Q8C0E3 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Trim47Q8C0E3 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Trim47Q8C0E3 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Trim47Q8C0E3 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Trim47Q8C0E3 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Trim47Q8C0E3 Gm11673-201ENSMUST00000117846 331 ntBASIC5.2□□□□□ -1.58
Trim47Q8C0E3 Gm15012-201ENSMUST00000119176 106 ntBASIC5.2□□□□□ -1.58
Trim47Q8C0E3 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC5.2□□□□□ -1.58
Trim47Q8C0E3 Gm4912-201ENSMUST00000122212 1044 ntBASIC5.2□□□□□ -1.58
Trim47Q8C0E3 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC5.2□□□□□ -1.58
Trim47Q8C0E3 Gm23959-201ENSMUST00000157208 324 ntBASIC5.2□□□□□ -1.58
Trim47Q8C0E3 Gm22606-201ENSMUST00000158290 103 ntBASIC5.2□□□□□ -1.58
Trim47Q8C0E3 Gm22177-201ENSMUST00000175002 158 ntBASIC5.2□□□□□ -1.58
Trim47Q8C0E3 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC5.2□□□□□ -1.58
Trim47Q8C0E3 Mir1a-2-201ENSMUST00000198520 72 ntBASIC5.2□□□□□ -1.58
Trim47Q8C0E3 Snord80-202ENSMUST00000199023 77 ntBASIC5.2□□□□□ -1.58
Trim47Q8C0E3 Gm2522-201ENSMUST00000204280 322 ntBASIC5.2□□□□□ -1.58
Trim47Q8C0E3 Gm45007-201ENSMUST00000206237 366 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms